BLASTX nr result

ID: Papaver23_contig00001486 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Papaver23_contig00001486
         (618 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AAQ24852.1| 10 kDa photosystem II polypeptide [Trifolium prat...    66   6e-09
gb|AFK39810.1| unknown [Lotus japonicus] gi|388512023|gb|AFK4407...    65   7e-09
ref|XP_002332206.1| hypothetical protein POPTRDRAFT_674736 [Popu...    64   2e-08
gb|ABK96223.1| unknown [Populus trichocarpa x Populus deltoides]...    64   2e-08
gb|ABI14811.1| chloroplast photosystem II light-inducible protei...    64   2e-08

>gb|AAQ24852.1| 10 kDa photosystem II polypeptide [Trifolium pratense]
          Length = 136

 Score = 65.9 bits (159), Expect = 6e-09
 Identities = 46/118 (38%), Positives = 46/118 (38%)
 Frame = +3

Query: 3   KKIKTDTPYXXXXXXXXXXXLDASGRKPKGKGVYQFTDKYGANXXXXXXXXXXXXXXXXX 182
           KKIKTDTPY           LDASGRK KGKGVYQF DKYGAN                 
Sbjct: 41  KKIKTDTPYGTGGGMDLPNGLDASGRKQKGKGVYQFVDKYGAN----------------- 83

Query: 183 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGLAIWAVTXXXXXXXXXXXVYNTSALS 356
                                          GLAIWAVT           VYNTSALS
Sbjct: 84  ------VDGYSPIYEPKDWSPTGDVYTGGTTGLAIWAVTLAGLLAGGALLVYNTSALS 135


>gb|AFK39810.1| unknown [Lotus japonicus] gi|388512023|gb|AFK44073.1| unknown
           [Lotus japonicus]
          Length = 139

 Score = 65.5 bits (158), Expect = 7e-09
 Identities = 44/118 (37%), Positives = 47/118 (39%)
 Frame = +3

Query: 3   KKIKTDTPYXXXXXXXXXXXLDASGRKPKGKGVYQFTDKYGANXXXXXXXXXXXXXXXXX 182
           KKIKTDTPY           +DASGRKP+GKGVYQ+ DKYGAN                 
Sbjct: 44  KKIKTDTPYGTGGGMNLRNGVDASGRKPRGKGVYQYVDKYGAN----------------- 86

Query: 183 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGLAIWAVTXXXXXXXXXXXVYNTSALS 356
                                          GLAIWAVT           VYNTSALS
Sbjct: 87  ------VDGYSPIYDTKDWSPTGDVYAGGTTGLAIWAVTLLGLLAGGALLVYNTSALS 138


>ref|XP_002332206.1| hypothetical protein POPTRDRAFT_674736 [Populus trichocarpa]
           gi|118487848|gb|ABK95747.1| unknown [Populus
           trichocarpa] gi|222875313|gb|EEF12444.1| hypothetical
           protein POPTRDRAFT_674736 [Populus trichocarpa]
          Length = 137

 Score = 63.9 bits (154), Expect = 2e-08
 Identities = 30/43 (69%), Positives = 31/43 (72%)
 Frame = +3

Query: 3   KKIKTDTPYXXXXXXXXXXXLDASGRKPKGKGVYQFTDKYGAN 131
           KKIKTDTPY           LDASGRKPKGKGVYQ+ DKYGAN
Sbjct: 42  KKIKTDTPYGTGGGMNLRDGLDASGRKPKGKGVYQYVDKYGAN 84


>gb|ABK96223.1| unknown [Populus trichocarpa x Populus deltoides]
           gi|118488997|gb|ABK96306.1| unknown [Populus trichocarpa
           x Populus deltoides] gi|118489823|gb|ABK96711.1| unknown
           [Populus trichocarpa x Populus deltoides]
          Length = 137

 Score = 63.9 bits (154), Expect = 2e-08
 Identities = 30/43 (69%), Positives = 31/43 (72%)
 Frame = +3

Query: 3   KKIKTDTPYXXXXXXXXXXXLDASGRKPKGKGVYQFTDKYGAN 131
           KKIKTDTPY           LDASGRKPKGKGVYQ+ DKYGAN
Sbjct: 42  KKIKTDTPYGTGGGMNLRDGLDASGRKPKGKGVYQYVDKYGAN 84


>gb|ABI14811.1| chloroplast photosystem II light-inducible protein [Pachysandra
           terminalis]
          Length = 138

 Score = 63.9 bits (154), Expect = 2e-08
 Identities = 44/118 (37%), Positives = 46/118 (38%)
 Frame = +3

Query: 3   KKIKTDTPYXXXXXXXXXXXLDASGRKPKGKGVYQFTDKYGANXXXXXXXXXXXXXXXXX 182
           KKIKTD PY           LDASGRKPKGKGVYQF DKYGAN                 
Sbjct: 43  KKIKTDKPYGTGGGMSLRDGLDASGRKPKGKGVYQFVDKYGAN----------------- 85

Query: 183 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGLAIWAVTXXXXXXXXXXXVYNTSALS 356
                                          GL +WA+T           VYNTSALS
Sbjct: 86  ------VDGYSPIYDQXDWSPSGAVYVGGTTGLLVWAITLAALLLGGALLVYNTSALS 137


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