BLASTX nr result
ID: Papaver23_contig00001465
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Papaver23_contig00001465
(1464 letters)
Database: ./nr
23,641,837 sequences; 8,123,359,852 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_002278169.1| PREDICTED: pentatricopeptide repeat-containi... 176 1e-86
ref|XP_002274432.1| PREDICTED: pentatricopeptide repeat-containi... 116 1e-60
gb|AEP33773.1| organelle transcript processing 82, partial [Lobu... 112 5e-60
gb|AEP33761.1| organelle transcript processing 82, partial [Cruc... 110 2e-59
gb|ABK26521.1| unknown [Picea sitchensis] 124 2e-59
>ref|XP_002278169.1| PREDICTED: pentatricopeptide repeat-containing protein At5g66520-like
[Vitis vinifera]
Length = 596
Score = 176 bits (445), Expect(3) = 1e-86
Identities = 82/131 (62%), Positives = 99/131 (75%)
Frame = -2
Query: 1463 ITPDHISYLAVLCSCSHMGSVEKGFHYFNSMVEVHGIKPELDHYTCMVDXXXXXXXXXXX 1284
I+PD +SY+AVLC+CSH G VEKGFHYF SM +VHGI+PELDHY CMVD
Sbjct: 321 ISPDGVSYIAVLCACSHAGWVEKGFHYFASMSDVHGIRPELDHYACMVDLLGRAGLLEEA 380
Query: 1283 XRFINTMPITPDNVIWGALLGAWRTHSNVEMGQRVGNYLIESDPGHDGRYVLLSNIYAVS 1104
+F+ +MPI PDNVIWGALLGA R + N EMGQRVG+ L+ESD HDGRY+LLSNIYA S
Sbjct: 381 EKFVASMPIKPDNVIWGALLGACRVYGNAEMGQRVGSLLVESDQNHDGRYILLSNIYAES 440
Query: 1103 SKGDVLKKFRE 1071
KG+ ++ R+
Sbjct: 441 MKGEDAEQVRK 451
Score = 112 bits (281), Expect(3) = 1e-86
Identities = 58/107 (54%), Positives = 70/107 (65%)
Frame = -1
Query: 1086 EEIQXXXXXXXXXRVPGCSSIEVDGIVHEFVTGDRSHDKTGEIYSVWEEMVTEIKKLGYA 907
E+++ RVPGCS IEV G VHEF +GDRSH+KT EIY +WEE+V EIKK GY
Sbjct: 447 EQVRKTMRRRKVDRVPGCSLIEVAGFVHEFFSGDRSHEKTEEIYLMWEEIVKEIKKFGYR 506
Query: 906 PETKGXXXXXXXXXXXXXVGYHSEKLAVAFGFISQEPGSVLRIVKNI 766
ET+ +G+HSEKLAVAFGF+ + GS LRIVKNI
Sbjct: 507 EETRAVVFDVEEEEKEAVIGHHSEKLAVAFGFLYTKSGSTLRIVKNI 553
Score = 80.9 bits (198), Expect(3) = 1e-86
Identities = 33/41 (80%), Positives = 36/41 (87%)
Frame = -2
Query: 755 CSDCHSAIKLVSKVFKRKIVVRDRRRFHHFEDGFCSCNDYW 633
CSDCH AIKLVSKVFKRKI +RDR+ FHHFE+G CSC DYW
Sbjct: 556 CSDCHYAIKLVSKVFKRKIAIRDRKCFHHFEEGLCSCKDYW 596
>ref|XP_002274432.1| PREDICTED: pentatricopeptide repeat-containing protein At1g08070-like
[Vitis vinifera]
Length = 738
Score = 116 bits (290), Expect(3) = 1e-60
Identities = 56/128 (43%), Positives = 76/128 (59%)
Frame = -2
Query: 1457 PDHISYLAVLCSCSHMGSVEKGFHYFNSMVEVHGIKPELDHYTCMVDXXXXXXXXXXXXR 1278
PD I+++ VL +CSH G VE G F+SMVE + I P+L HY CM+D
Sbjct: 465 PDDITFVGVLSACSHAGLVELGRQCFSSMVEDYDISPKLQHYGCMIDLLGRAGLFDEAEA 524
Query: 1277 FINTMPITPDNVIWGALLGAWRTHSNVEMGQRVGNYLIESDPGHDGRYVLLSNIYAVSSK 1098
+ M + PD IWG+LLGA R H NVE+G+ +L E +P + G YVLLSNIYA + +
Sbjct: 525 LMKNMEMKPDGAIWGSLLGACRVHGNVELGEFAAKHLFELEPENPGAYVLLSNIYATAGR 584
Query: 1097 GDVLKKFR 1074
D + + R
Sbjct: 585 WDDVARIR 592
Score = 90.1 bits (222), Expect(3) = 1e-60
Identities = 42/95 (44%), Positives = 63/95 (66%)
Frame = -1
Query: 1044 VPGCSSIEVDGIVHEFVTGDRSHDKTGEIYSVWEEMVTEIKKLGYAPETKGXXXXXXXXX 865
VPGCSSIEVD +VHEF+ GD+ H+++ +IY + +E+ ++K G+ P+T
Sbjct: 603 VPGCSSIEVDSVVHEFLVGDKVHEQSQDIYKMLDEIDQLLEKAGHVPDTSEVLYDMDEEW 662
Query: 864 XXXXVGYHSEKLAVAFGFISQEPGSVLRIVKNIVV 760
+ +HSEKLA+AFG IS +P + +RIVKN+ V
Sbjct: 663 KEGSLSHHSEKLAIAFGLISTKPETTIRIVKNLRV 697
Score = 76.3 bits (186), Expect(3) = 1e-60
Identities = 29/41 (70%), Positives = 35/41 (85%)
Frame = -2
Query: 755 CSDCHSAIKLVSKVFKRKIVVRDRRRFHHFEDGFCSCNDYW 633
C +CHSAIKL+SK+F R+I+ RDR RFHHF+DG CSC DYW
Sbjct: 698 CGNCHSAIKLISKIFNREIIARDRNRFHHFKDGSCSCMDYW 738
>gb|AEP33773.1| organelle transcript processing 82, partial [Lobularia maritima]
Length = 695
Score = 112 bits (280), Expect(3) = 5e-60
Identities = 55/130 (42%), Positives = 78/130 (60%)
Frame = -2
Query: 1463 ITPDHISYLAVLCSCSHMGSVEKGFHYFNSMVEVHGIKPELDHYTCMVDXXXXXXXXXXX 1284
I PD I+++ +L +CSH G ++ G H F SM E + I P+L+HY CM+D
Sbjct: 420 IEPDDITFVGLLSACSHSGMLDLGRHIFRSMKEDYKITPKLEHYGCMIDLLGHSGLFKEA 479
Query: 1283 XRFINTMPITPDNVIWGALLGAWRTHSNVEMGQRVGNYLIESDPGHDGRYVLLSNIYAVS 1104
INTM + PD VIW +LL A + H NVE+G+ LI+ +P + G YVLLSNIYA +
Sbjct: 480 EEMINTMEMEPDGVIWCSLLKACKMHGNVELGESYAQNLIKIEPKNPGSYVLLSNIYATA 539
Query: 1103 SKGDVLKKFR 1074
+ + + K R
Sbjct: 540 GRWNEVAKIR 549
Score = 92.4 bits (228), Expect(3) = 5e-60
Identities = 44/95 (46%), Positives = 61/95 (64%)
Frame = -1
Query: 1044 VPGCSSIEVDGIVHEFVTGDRSHDKTGEIYSVWEEMVTEIKKLGYAPETKGXXXXXXXXX 865
VPGCSSIE+D +VHEF+ GD+ H + EIY + EEM +++ G+ P+T
Sbjct: 560 VPGCSSIEIDSVVHEFIIGDKFHPRNREIYGMLEEMEVLLEEAGFVPDTSEVLQEMEEEW 619
Query: 864 XXXXVGYHSEKLAVAFGFISQEPGSVLRIVKNIVV 760
+ +HSEKLA+AFG IS +PG+ L IVKN+ V
Sbjct: 620 KEGALRHHSEKLAIAFGLISTKPGTKLTIVKNLRV 654
Score = 75.9 bits (185), Expect(3) = 5e-60
Identities = 28/41 (68%), Positives = 34/41 (82%)
Frame = -2
Query: 755 CSDCHSAIKLVSKVFKRKIVVRDRRRFHHFEDGFCSCNDYW 633
C +CH A KL+SK++KR+I+ RDR RFHHF DG CSCNDYW
Sbjct: 655 CRNCHEATKLISKIYKREIIARDRTRFHHFRDGVCSCNDYW 695
>gb|AEP33761.1| organelle transcript processing 82, partial [Crucihimalaya wallichii]
Length = 710
Score = 110 bits (275), Expect(3) = 2e-59
Identities = 54/130 (41%), Positives = 79/130 (60%)
Frame = -2
Query: 1463 ITPDHISYLAVLCSCSHMGSVEKGFHYFNSMVEVHGIKPELDHYTCMVDXXXXXXXXXXX 1284
I PD I+++ +L +CSH G ++ G H F SM E + I P+L+HY CM+D
Sbjct: 435 IEPDDITFVGLLSACSHSGMLDLGRHIFRSMKEDYKITPKLEHYGCMIDLLGHSGLFKEA 494
Query: 1283 XRFINTMPITPDNVIWGALLGAWRTHSNVEMGQRVGNYLIESDPGHDGRYVLLSNIYAVS 1104
INTM + PD VIW +LL A + ++NVE+G+ LI+ +P + G YVLLSNIYA +
Sbjct: 495 EEMINTMEMEPDGVIWCSLLKACKMYANVELGESYAQNLIKIEPKNPGSYVLLSNIYATA 554
Query: 1103 SKGDVLKKFR 1074
+ + + K R
Sbjct: 555 GRWNEVAKIR 564
Score = 92.4 bits (228), Expect(3) = 2e-59
Identities = 44/95 (46%), Positives = 61/95 (64%)
Frame = -1
Query: 1044 VPGCSSIEVDGIVHEFVTGDRSHDKTGEIYSVWEEMVTEIKKLGYAPETKGXXXXXXXXX 865
VPGCSSIE+D +VHEF+ GD+ H + EIY + EEM +++ G+ P+T
Sbjct: 575 VPGCSSIEIDSVVHEFIIGDKFHPRNREIYGMLEEMEVLLEEAGFVPDTSEVLQEMEEEW 634
Query: 864 XXXXVGYHSEKLAVAFGFISQEPGSVLRIVKNIVV 760
+ +HSEKLA+AFG IS +PG+ L IVKN+ V
Sbjct: 635 KEGALRHHSEKLAIAFGLISTKPGTKLTIVKNLRV 669
Score = 75.9 bits (185), Expect(3) = 2e-59
Identities = 28/41 (68%), Positives = 34/41 (82%)
Frame = -2
Query: 755 CSDCHSAIKLVSKVFKRKIVVRDRRRFHHFEDGFCSCNDYW 633
C +CH A KL+SK++KR+I+ RDR RFHHF DG CSCNDYW
Sbjct: 670 CRNCHEATKLISKIYKREIIARDRTRFHHFRDGVCSCNDYW 710
>gb|ABK26521.1| unknown [Picea sitchensis]
Length = 370
Score = 124 bits (312), Expect(3) = 2e-59
Identities = 58/131 (44%), Positives = 81/131 (61%)
Frame = -2
Query: 1463 ITPDHISYLAVLCSCSHMGSVEKGFHYFNSMVEVHGIKPELDHYTCMVDXXXXXXXXXXX 1284
+ P+ I+++ VL CSH G V++G +YF+SM HGI P+ +HY+CMVD
Sbjct: 95 VKPNQITFVVVLSGCSHAGLVDEGRNYFDSMTRDHGISPKAEHYSCMVDLFGRAGCLDEA 154
Query: 1283 XRFINTMPITPDNVIWGALLGAWRTHSNVEMGQRVGNYLIESDPGHDGRYVLLSNIYAVS 1104
FIN MP+ P+ +WG+LLGA R H N+E+ +R LIE P + G YVLLSNIYA +
Sbjct: 155 LNFINQMPVEPNASVWGSLLGACRVHGNIELAERAVEQLIELTPENPGTYVLLSNIYAAA 214
Query: 1103 SKGDVLKKFRE 1071
+ D K R+
Sbjct: 215 GRWDDAGKVRK 225
Score = 85.5 bits (210), Expect(3) = 2e-59
Identities = 42/94 (44%), Positives = 54/94 (57%)
Frame = -1
Query: 1041 PGCSSIEVDGIVHEFVTGDRSHDKTGEIYSVWEEMVTEIKKLGYAPETKGXXXXXXXXXX 862
PGCS IEV VH F+ GD SH + EIY E + ++K GY P T
Sbjct: 236 PGCSWIEVQNKVHPFIVGDSSHPQIEEIYETLETLTLQMKAAGYIPNTNFVLHDVEEEQK 295
Query: 861 XXXVGYHSEKLAVAFGFISQEPGSVLRIVKNIVV 760
+G+HSEKLA+AFG IS PG+ +R+VKN+ V
Sbjct: 296 EWILGHHSEKLAIAFGIISTPPGTTIRVVKNLRV 329
Score = 68.6 bits (166), Expect(3) = 2e-59
Identities = 25/41 (60%), Positives = 32/41 (78%)
Frame = -2
Query: 755 CSDCHSAIKLVSKVFKRKIVVRDRRRFHHFEDGFCSCNDYW 633
C DCH+A K +S++ R+IV+RD RFHHF+DG CSC DYW
Sbjct: 330 CGDCHTATKFISRIVSREIVLRDTHRFHHFKDGQCSCGDYW 370