BLASTX nr result

ID: Papaver23_contig00001371 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Papaver23_contig00001371
         (827 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003557616.1| PREDICTED: probable UDP-arabinose 4-epimeras...    75   5e-12
ref|XP_002270765.1| PREDICTED: UDP-arabinose 4-epimerase 1 [Viti...    73   3e-11
sp|O64749.3|ARAE2_ARATH RecName: Full=Putative UDP-arabinose 4-e...    73   3e-11
ref|XP_002323184.1| predicted protein [Populus trichocarpa] gi|2...    71   1e-10
ref|XP_002307918.1| predicted protein [Populus trichocarpa] gi|2...    70   2e-10

>ref|XP_003557616.1| PREDICTED: probable UDP-arabinose 4-epimerase 1-like [Brachypodium
           distachyon]
          Length = 421

 Score = 75.5 bits (184), Expect(2) = 5e-12
 Identities = 58/136 (42%), Positives = 67/136 (49%), Gaps = 7/136 (5%)
 Frame = +3

Query: 75  DNLSRGNFGAVKVLQEQFPEPGRLQFIYADLGDPNIRVKCECWSLFLNN*FR*IKSFGRM 254
           DNLSRGN GAVKVLQ  FPEPGRLQFIYADLGDP    K     +F  N F  +     M
Sbjct: 103 DNLSRGNIGAVKVLQSLFPEPGRLQFIYADLGDPKAVNK-----IFAENAFDAV-----M 152

Query: 255 HICCDAFNG-------RCICGVWVGALLNLLGIIIT*DQTPWSYWRQ*QHMV*RR*FIQS 413
           H    A+ G       R    +    L+ +L  + T D     Y               +
Sbjct: 153 HFAAVAYVGESTLEPLRYYHNITANTLV-VLEAMATHDVRTLIYSS-----------TCA 200

Query: 414 TYDEPFKMPITEDTPQ 461
           TY EP KMPITE+TPQ
Sbjct: 201 TYGEPEKMPITEETPQ 216



 Score = 21.6 bits (44), Expect(2) = 5e-12
 Identities = 7/10 (70%), Positives = 10/10 (100%)
 Frame = +1

Query: 451 ILLRYFNVVG 480
           ++LRYFNV+G
Sbjct: 247 MILRYFNVIG 256


>ref|XP_002270765.1| PREDICTED: UDP-arabinose 4-epimerase 1 [Vitis vinifera]
           gi|297740899|emb|CBI31081.3| unnamed protein product
           [Vitis vinifera]
          Length = 418

 Score = 72.8 bits (177), Expect(2) = 3e-11
 Identities = 56/135 (41%), Positives = 66/135 (48%), Gaps = 5/135 (3%)
 Frame = +3

Query: 75  DNLSRGNFGAVKVLQEQFPEPGRLQFIYADLGDPNIRVKCECWSLFLNN*FR*IKSFGRM 254
           DNLSRGN GA+KVLQEQFPEPGRLQFIYADLGD     K     +F  N F  +     M
Sbjct: 101 DNLSRGNLGAIKVLQEQFPEPGRLQFIYADLGDAKAVNK-----IFSENAFDAV-----M 150

Query: 255 HICCDAFNGRCI---CGVWVGALLNLLGIIIT*DQTPWSYWRQ*QHMV*RR*FIQ--STY 419
           H    A+ G         +     N L ++               H V    +    +TY
Sbjct: 151 HFAAVAYVGESTLEPLRYYHNITSNTLVVLEA----------MAAHGVNTLIYSSTCATY 200

Query: 420 DEPFKMPITEDTPQI 464
            EP KMPITE TPQ+
Sbjct: 201 GEPEKMPITEQTPQV 215



 Score = 21.6 bits (44), Expect(2) = 3e-11
 Identities = 7/10 (70%), Positives = 10/10 (100%)
 Frame = +1

Query: 451 ILLRYFNVVG 480
           ++LRYFNV+G
Sbjct: 243 MILRYFNVIG 252


>sp|O64749.3|ARAE2_ARATH RecName: Full=Putative UDP-arabinose 4-epimerase 2; AltName:
           Full=UDP-D-xylose 4-epimerase 2
          Length = 417

 Score = 72.8 bits (177), Expect(2) = 3e-11
 Identities = 55/135 (40%), Positives = 68/135 (50%), Gaps = 5/135 (3%)
 Frame = +3

Query: 75  DNLSRGNFGAVKVLQEQFPEPGRLQFIYADLGDPNIRVKCECWSLFLNN*FR*IKSFGRM 254
           DNLSRGN GAVK+LQ+ FPEPG+LQFIYADLGD N   K     +F  N F  +     M
Sbjct: 100 DNLSRGNLGAVKILQQLFPEPGKLQFIYADLGDANAVNK-----IFSENAFDAV-----M 149

Query: 255 HICCDAFNGRCI---CGVWVGALLNLLGIIIT*DQTPWSYWRQ*QHMV*RR*FIQ--STY 419
           H    A+ G         +     N L ++ T             H V    +    +TY
Sbjct: 150 HFAAVAYVGESTQFPLKYYHNITSNTLVVLET----------MAAHGVKTLIYSSTCATY 199

Query: 420 DEPFKMPITEDTPQI 464
            EP KMPITE+TPQ+
Sbjct: 200 GEPEKMPITEETPQV 214



 Score = 21.6 bits (44), Expect(2) = 3e-11
 Identities = 7/10 (70%), Positives = 10/10 (100%)
 Frame = +1

Query: 451 ILLRYFNVVG 480
           ++LRYFNV+G
Sbjct: 242 MILRYFNVIG 251


>ref|XP_002323184.1| predicted protein [Populus trichocarpa] gi|222867814|gb|EEF04945.1|
           predicted protein [Populus trichocarpa]
          Length = 378

 Score = 70.9 bits (172), Expect(2) = 1e-10
 Identities = 55/135 (40%), Positives = 65/135 (48%), Gaps = 5/135 (3%)
 Frame = +3

Query: 75  DNLSRGNFGAVKVLQEQFPEPGRLQFIYADLGDPNIRVKCECWSLFLNN*FR*IKSFGRM 254
           DNLSRGN GAVKVLQ+ FPEPGRLQFIYADLGD     K     +F  N F  +     M
Sbjct: 63  DNLSRGNLGAVKVLQDLFPEPGRLQFIYADLGDAKAVNK-----IFAENAFDAV-----M 112

Query: 255 HICCDAFNGRCI---CGVWVGALLNLLGIIIT*DQTPWSYWRQ*QHMV*RR*FIQ--STY 419
           H    A+ G         +     N L ++               H V    +    +TY
Sbjct: 113 HFAAVAYVGESTMEPLRYYHNITSNTLVVLEA----------MAAHKVKTLIYSSTCATY 162

Query: 420 DEPFKMPITEDTPQI 464
            EP KMPITE TPQ+
Sbjct: 163 GEPVKMPITEQTPQL 177



 Score = 21.6 bits (44), Expect(2) = 1e-10
 Identities = 7/10 (70%), Positives = 10/10 (100%)
 Frame = +1

Query: 451 ILLRYFNVVG 480
           ++LRYFNV+G
Sbjct: 205 MILRYFNVIG 214


>ref|XP_002307918.1| predicted protein [Populus trichocarpa] gi|222853894|gb|EEE91441.1|
           predicted protein [Populus trichocarpa]
          Length = 390

 Score = 70.5 bits (171), Expect(2) = 2e-10
 Identities = 55/135 (40%), Positives = 65/135 (48%), Gaps = 5/135 (3%)
 Frame = +3

Query: 75  DNLSRGNFGAVKVLQEQFPEPGRLQFIYADLGDPNIRVKCECWSLFLNN*FR*IKSFGRM 254
           DNLSRGN GAVKVLQE FPEPGRLQFIYADLGD     K     +F  N F  +     M
Sbjct: 82  DNLSRGNLGAVKVLQELFPEPGRLQFIYADLGDAKAVNK-----IFAENAFDAV-----M 131

Query: 255 HICCDAFNGRCI---CGVWVGALLNLLGIIIT*DQTPWSYWRQ*QHMV*RR*FIQ--STY 419
           H    A+ G         +     N L ++               H V    +    +TY
Sbjct: 132 HFAAVAYVGESTIEPLRYYHNITSNTLVVLEA----------MAAHNVKTLIYSSTCATY 181

Query: 420 DEPFKMPITEDTPQI 464
            EP KMPI E+TPQ+
Sbjct: 182 GEPIKMPIREETPQL 196



 Score = 21.6 bits (44), Expect(2) = 2e-10
 Identities = 7/10 (70%), Positives = 10/10 (100%)
 Frame = +1

Query: 451 ILLRYFNVVG 480
           ++LRYFNV+G
Sbjct: 224 MILRYFNVIG 233


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