BLASTX nr result

ID: Papaver23_contig00001169 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Papaver23_contig00001169
         (753 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002285377.1| PREDICTED: uncharacterized protein LOC100248...   386   e-105
gb|AFC89654.1| RBP42 [Elaeis guineensis]                              365   5e-99
ref|XP_004137219.1| PREDICTED: uncharacterized protein LOC101207...   343   3e-92
ref|NP_188119.1| RNA recognition motif-containing protein [Arabi...   339   3e-91
ref|XP_003527209.1| PREDICTED: polyadenylate-binding protein, cy...   338   7e-91

>ref|XP_002285377.1| PREDICTED: uncharacterized protein LOC100248626 [Vitis vinifera]
           gi|147789426|emb|CAN66609.1| hypothetical protein
           VITISV_017556 [Vitis vinifera]
          Length = 449

 Score =  386 bits (992), Expect = e-105
 Identities = 194/249 (77%), Positives = 218/249 (87%), Gaps = 2/249 (0%)
 Frame = -2

Query: 752 VASDGISASKLSTEDTRKIIEPFTQEQLLDILQDAVMRHADVLDAVRLIADRDPTQRKLF 573
           V++DG S +KL+ ED RKIIEPF  +QLL+ILQ+A +RH DVLDA+R IADRD TQRKLF
Sbjct: 15  VSTDGDSLTKLAPEDARKIIEPFGHDQLLEILQNAAVRHLDVLDAIRSIADRDLTQRKLF 74

Query: 572 IRGLGWETTTEGLRTLFSSYGDLDEAVVILDKVTGKSKGYGFVTFKHIDGAMLALKEPSK 393
           IRGLGW+TTTEGLR LFS+YG+L+EAVVILDKVT KSKGYGFVTFKH+DGA+LALKEPSK
Sbjct: 75  IRGLGWDTTTEGLRQLFSAYGELEEAVVILDKVTAKSKGYGFVTFKHVDGALLALKEPSK 134

Query: 392 KIDGRMTVTQLAASGTTGPTSNIQPIDVSARKIYVGNVPFDMPSDRLLAHFSSYGEIEEG 213
           KIDGRMTVTQLAASG +GP SN   +DVS RKIYV NVP DMP+DRLLAHFSSYGEIEEG
Sbjct: 135 KIDGRMTVTQLAASGLSGPASNASAVDVSMRKIYVANVPVDMPADRLLAHFSSYGEIEEG 194

Query: 212 PLGFDKQTGKSRGFALFVYKSSEAARASLVDPIKTIDGHQLVCKLAIEGKKGKPGAP--N 39
           PLGFDKQTGKSRGFALFVYK++EAA+A+LVDP K IDG QLVCKLAIEGKKGK G P   
Sbjct: 195 PLGFDKQTGKSRGFALFVYKTAEAAQAALVDPTKMIDGRQLVCKLAIEGKKGKTGGPAQA 254

Query: 38  AVGVQGQSG 12
             GV G++G
Sbjct: 255 PTGVPGEAG 263


>gb|AFC89654.1| RBP42 [Elaeis guineensis]
          Length = 413

 Score =  365 bits (937), Expect = 5e-99
 Identities = 189/245 (77%), Positives = 207/245 (84%), Gaps = 6/245 (2%)
 Frame = -2

Query: 734 SASKLSTEDTRKIIEPFTQEQLLDILQDAVMRHADVLDAVRLIADRDPTQRKLFIRGLGW 555
           S + L+ ED RKI+EPFT+E LLDI+++A+ R A VLDAVR IADRDP QRKLFIRGLGW
Sbjct: 19  SPALLTPEDARKIVEPFTREHLLDIVREAMCRDAGVLDAVRAIADRDPAQRKLFIRGLGW 78

Query: 554 ETTTEGLRTLFSSYGDLDEAVVILDKVTGKSKGYGFVTFKHIDGAMLALKEPSKKIDGRM 375
           ETTTE LR LFSSYG+L+EAVVI+DK TGKSKGYGF+TF+HIDGA+LALKEPSKKIDGRM
Sbjct: 79  ETTTESLRNLFSSYGELEEAVVIVDKATGKSKGYGFITFRHIDGALLALKEPSKKIDGRM 138

Query: 374 TVTQLAASGTTGPTSNIQPIDVSARKIYVGNVPFDMPSDRLLAHFSSYGEIEEGPLGFDK 195
           TVTQLAA+GTT        IDVS RKIYVGNVP DMPSDRLLAHFSSYGEIEEGPLGFDK
Sbjct: 139 TVTQLAAAGTTAAAP--PAIDVSLRKIYVGNVPADMPSDRLLAHFSSYGEIEEGPLGFDK 196

Query: 194 QTGKSRGFALFVYKSSEAARASLVDPIKTIDGHQLVCKLAIEGKKGKPGAPNA------V 33
           QTGK RGFALFVYK++E A ASLVDP K IDGH LVCKLAI+GKK KPGAP A       
Sbjct: 197 QTGKFRGFALFVYKTAEGAGASLVDPTKNIDGHHLVCKLAIDGKKVKPGAPAAGAAAPVG 256

Query: 32  GVQGQ 18
           GVQGQ
Sbjct: 257 GVQGQ 261


>ref|XP_004137219.1| PREDICTED: uncharacterized protein LOC101207569 [Cucumis sativus]
           gi|449483196|ref|XP_004156519.1| PREDICTED:
           uncharacterized protein LOC101231665 [Cucumis sativus]
          Length = 434

 Score =  343 bits (879), Expect = 3e-92
 Identities = 177/245 (72%), Positives = 202/245 (82%), Gaps = 1/245 (0%)
 Frame = -2

Query: 752 VASDGISASKLSTEDTRKIIEPFTQEQLLDILQDAVMRHADVLDAVRLIADRDPTQRKLF 573
           V S   S S+++ ED RKII+ FT +QL+DILQDAV RH DVLDAVR IADRD +QRKLF
Sbjct: 14  VDSSESSFSRITPEDARKIIDRFTPDQLIDILQDAVSRHLDVLDAVRSIADRDVSQRKLF 73

Query: 572 IRGLGWETTTEGLRTLFSSYGDLDEAVVILDKVTGKSKGYGFVTFKHIDGAMLALKEPSK 393
           IRGL  +T+TEGLR+LFSSYG+L+EAVVI+DK TGKSKGYGFVTFKH+DGA+LALKEPSK
Sbjct: 74  IRGLSCDTSTEGLRSLFSSYGELEEAVVIIDKATGKSKGYGFVTFKHVDGALLALKEPSK 133

Query: 392 KIDGRMTVTQLAASGTTGPTSNIQPIDVSARKIYVGNVPFDMPSDRLLAHFSSYGEIEEG 213
            IDGR+TVTQLAA G +G  SN    D+S RKIYV NVP DMP+D+LLAHFS YGEIEEG
Sbjct: 134 TIDGRVTVTQLAAVGISGQNSN--AADLSLRKIYVANVPMDMPADKLLAHFSLYGEIEEG 191

Query: 212 PLGFDKQTGKSRGFALFVYKSSEAARASLVDPIKTIDGHQLVCKLAIEGKKGKP-GAPNA 36
           PLGFDKQTGK RG+ALFVYK  E A+A+LVDPIKTIDG QL CK A +GKKGKP G P+ 
Sbjct: 192 PLGFDKQTGKCRGYALFVYKKPEGAQAALVDPIKTIDGRQLSCKFANDGKKGKPGGGPDG 251

Query: 35  VGVQG 21
              QG
Sbjct: 252 NQTQG 256


>ref|NP_188119.1| RNA recognition motif-containing protein [Arabidopsis thaliana]
           gi|42572443|ref|NP_974317.1| RNA recognition
           motif-containing protein [Arabidopsis thaliana]
           gi|8777484|dbj|BAA97064.1| unnamed protein product
           [Arabidopsis thaliana] gi|17380744|gb|AAL36202.1|
           putative RNA-binding protein [Arabidopsis thaliana]
           gi|20259621|gb|AAM14167.1| putative RNA-binding protein
           [Arabidopsis thaliana] gi|222422941|dbj|BAH19456.1|
           AT3G15010 [Arabidopsis thaliana]
           gi|332642081|gb|AEE75602.1| RNA recognition
           motif-containing protein [Arabidopsis thaliana]
           gi|332642082|gb|AEE75603.1| RNA recognition
           motif-containing protein [Arabidopsis thaliana]
          Length = 404

 Score =  339 bits (870), Expect = 3e-91
 Identities = 170/235 (72%), Positives = 200/235 (85%), Gaps = 1/235 (0%)
 Frame = -2

Query: 737 ISASKLSTEDTRKIIEPFTQEQLLDILQDAVMRHADVLDAVRLIADRDPTQRKLFIRGLG 558
           I  ++LS +D RKIIE FT +QLLD+LQ+A++RH DVL++VRL AD D +QRKLFIRGL 
Sbjct: 24  IGPTRLSPQDARKIIERFTTDQLLDLLQEAIVRHPDVLESVRLTADSDISQRKLFIRGLA 83

Query: 557 WETTTEGLRTLFSSYGDLDEAVVILDKVTGKSKGYGFVTFKHIDGAMLALKEPSKKIDGR 378
            +TTTEGLR+LFSSYGDL+EA+VILDKVTGKSKGYGFVTF H+DGA+LALKEPSKKIDGR
Sbjct: 84  ADTTTEGLRSLFSSYGDLEEAIVILDKVTGKSKGYGFVTFMHVDGALLALKEPSKKIDGR 143

Query: 377 MTVTQLAASGTTGPTSNIQPIDVSARKIYVGNVPFDMPSDRLLAHFSSYGEIEEGPLGFD 198
           +TVTQLAASG  G  S I   D+S RKIYV NVPFDMP+DRLL HF +YG++EEGPLGFD
Sbjct: 144 VTVTQLAASGNQGTGSQI--ADISMRKIYVANVPFDMPADRLLNHFMAYGDVEEGPLGFD 201

Query: 197 KQTGKSRGFALFVYKSSEAARASLVDPIKTIDGHQLVCKLAIEGKK-GKPGAPNA 36
           K TGKSRGFALFVYK++E A+A+L DP+K IDG  L CKLA++GKK GKPG P A
Sbjct: 202 KVTGKSRGFALFVYKTAEGAQAALADPVKVIDGKHLNCKLAVDGKKGGKPGMPQA 256


>ref|XP_003527209.1| PREDICTED: polyadenylate-binding protein, cytoplasmic and
           nuclear-like [Glycine max]
          Length = 425

 Score =  338 bits (867), Expect = 7e-91
 Identities = 170/248 (68%), Positives = 206/248 (83%), Gaps = 1/248 (0%)
 Frame = -2

Query: 746 SDGISASKLSTEDTRKIIEPFTQEQLLDILQDAVMRHADVLDAVRLIADRDPTQRKLFIR 567
           +D     KLS  + RK+IE FT +QLLDILQDAV RH DVL AVR +AD D +QRKLFIR
Sbjct: 17  NDSSDPLKLSPSEVRKLIERFTSDQLLDILQDAVARHLDVLAAVRAVADPDVSQRKLFIR 76

Query: 566 GLGWETTTEGLRTLFSSYGDLDEAVVILDKVTGKSKGYGFVTFKHIDGAMLALKEPSKKI 387
           GLGW+TTT+GLR+LFS++GDL+EAVVILDK TGKSKGYGFVTF+H+DGA+LAL+EPSK+I
Sbjct: 77  GLGWDTTTDGLRSLFSTFGDLEEAVVILDKATGKSKGYGFVTFRHVDGALLALREPSKRI 136

Query: 386 DGRMTVTQLAASGTTGPTSNIQPIDVSARKIYVGNVPFDMPSDRLLAHFSSYGEIEEGPL 207
           DGR+TVTQLAA+G +   SN+ P DV+ RKIYV NVP D+P+D+LLAHFS YGEIEEGPL
Sbjct: 137 DGRVTVTQLAAAGNS--ASNVNPADVALRKIYVANVPPDLPADKLLAHFSVYGEIEEGPL 194

Query: 206 GFDKQTGKSRGFALFVYKSSEAARASLVDPIKTIDGHQLVCKLAI-EGKKGKPGAPNAVG 30
           GFDKQTGKS+GFALFVYKS E A+A+L+DP+KT++G QL CKLAI +GK+GK   P++  
Sbjct: 195 GFDKQTGKSKGFALFVYKSPEGAQAALIDPVKTVEGRQLSCKLAITDGKQGKRVGPDS-- 252

Query: 29  VQGQSGEV 6
            Q   G V
Sbjct: 253 AQAHHGNV 260


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