BLASTX nr result

ID: Papaver23_contig00001149 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Papaver23_contig00001149
         (547 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CAN82884.1| hypothetical protein VITISV_023155 [Vitis vinifera]    85   6e-15
ref|XP_002265743.1| PREDICTED: probable U3 small nucleolar RNA-a...    84   2e-14
ref|XP_003524762.1| PREDICTED: probable U3 small nucleolar RNA-a...    77   2e-12
gb|ACU17792.1| unknown [Glycine max]                                   77   2e-12
ref|XP_002517659.1| U3 small nucleolar RNA-associated protein, p...    77   2e-12

>emb|CAN82884.1| hypothetical protein VITISV_023155 [Vitis vinifera]
          Length = 229

 Score = 85.1 bits (209), Expect = 6e-15
 Identities = 43/78 (55%), Positives = 49/78 (62%), Gaps = 1/78 (1%)
 Frame = +3

Query: 24  GKLPS-QDIPAHIKRKTEISYRKLEAHKKRANELKNMYMEMAXXXXXXXXXXXXXXXEDE 200
           G LPS  D+P HIKRKT  SYR+LE  K R N+L+ +YM+MA               EDE
Sbjct: 152 GNLPSLDDVPNHIKRKTSASYRELETRKSRVNDLEKLYMDMALQKELQKRGRKRKLREDE 211

Query: 201 IVSPTSGPVYKWRTERKR 254
           IV PTS PVYKWR ERKR
Sbjct: 212 IVCPTSKPVYKWRAERKR 229


>ref|XP_002265743.1| PREDICTED: probable U3 small nucleolar RNA-associated protein 11
           [Vitis vinifera] gi|239056174|emb|CAQ58608.1| unknown
           gene [Vitis vinifera] gi|239056194|emb|CAQ58632.1|
           unknown protein / putative CGI-94 protein [Vitis
           vinifera] gi|296085811|emb|CBI31135.3| unnamed protein
           product [Vitis vinifera]
          Length = 229

 Score = 83.6 bits (205), Expect = 2e-14
 Identities = 42/78 (53%), Positives = 48/78 (61%), Gaps = 1/78 (1%)
 Frame = +3

Query: 24  GKLPS-QDIPAHIKRKTEISYRKLEAHKKRANELKNMYMEMAXXXXXXXXXXXXXXXEDE 200
           G LPS  D+P HIKRKT  SYR+LE  K R N+L+ +YM+MA               EDE
Sbjct: 152 GNLPSLDDVPNHIKRKTSASYRELETRKNRVNDLEKLYMDMALQKELQKRGRKRKLREDE 211

Query: 201 IVSPTSGPVYKWRTERKR 254
           I  PTS PVYKWR ERKR
Sbjct: 212 IACPTSKPVYKWRAERKR 229


>ref|XP_003524762.1| PREDICTED: probable U3 small nucleolar RNA-associated protein
           11-like [Glycine max]
          Length = 229

 Score = 77.0 bits (188), Expect = 2e-12
 Identities = 41/78 (52%), Positives = 50/78 (64%), Gaps = 2/78 (2%)
 Frame = +3

Query: 27  KLP--SQDIPAHIKRKTEISYRKLEAHKKRANELKNMYMEMAXXXXXXXXXXXXXXXEDE 200
           K+P  S+DIPA IKRKT  SY++LEA + R N+L+ +YM+MA               EDE
Sbjct: 152 KIPFTSEDIPAGIKRKTAQSYQELEARRSRLNQLEKIYMDMAMQKELQKKGRKRKLGEDE 211

Query: 201 IVSPTSGPVYKWRTERKR 254
           IV PTS PVYKW  ERKR
Sbjct: 212 IVCPTSKPVYKWCAERKR 229


>gb|ACU17792.1| unknown [Glycine max]
          Length = 138

 Score = 77.0 bits (188), Expect = 2e-12
 Identities = 41/78 (52%), Positives = 50/78 (64%), Gaps = 2/78 (2%)
 Frame = +3

Query: 27  KLP--SQDIPAHIKRKTEISYRKLEAHKKRANELKNMYMEMAXXXXXXXXXXXXXXXEDE 200
           K+P  S+DIPA IKRKT  SY++LEA + R N+L+ +YM+MA               EDE
Sbjct: 61  KIPFTSEDIPAGIKRKTAQSYQELEARRSRLNQLEKIYMDMAMQKELQKKGRKRKLGEDE 120

Query: 201 IVSPTSGPVYKWRTERKR 254
           IV PTS PVYKW  ERKR
Sbjct: 121 IVCPTSKPVYKWCAERKR 138


>ref|XP_002517659.1| U3 small nucleolar RNA-associated protein, putative [Ricinus
           communis] gi|223543291|gb|EEF44823.1| U3 small nucleolar
           RNA-associated protein, putative [Ricinus communis]
          Length = 231

 Score = 77.0 bits (188), Expect = 2e-12
 Identities = 37/72 (51%), Positives = 46/72 (63%)
 Frame = +3

Query: 39  QDIPAHIKRKTEISYRKLEAHKKRANELKNMYMEMAXXXXXXXXXXXXXXXEDEIVSPTS 218
           + +P  IKRK   SYR+LEA KKRAN+L+ +Y +MA               EDEIV PTS
Sbjct: 158 EHVPEQIKRKMNSSYRELEARKKRANQLEKLYADMALQKELQKKGKKRKLREDEIVCPTS 217

Query: 219 GPVYKWRTERKR 254
            P+YKWR+ERKR
Sbjct: 218 KPIYKWRSERKR 229


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