BLASTX nr result

ID: Papaver23_contig00001130 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Papaver23_contig00001130
         (1364 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002280960.2| PREDICTED: DNA topoisomerase 1-like [Vitis v...   145   2e-32
ref|XP_003588645.1| DNA topoisomerase, partial [Medicago truncat...   143   1e-31
ref|XP_003551158.1| PREDICTED: DNA topoisomerase 1-like [Glycine...   141   3e-31
emb|CAN67233.1| hypothetical protein VITISV_020021 [Vitis vinifera]   140   8e-31
emb|CBI20809.3| unnamed protein product [Vitis vinifera]              139   1e-30

>ref|XP_002280960.2| PREDICTED: DNA topoisomerase 1-like [Vitis vinifera]
          Length = 1185

 Score =  145 bits (366), Expect = 2e-32
 Identities = 88/179 (49%), Positives = 111/179 (62%)
 Frame = +2

Query: 827  IQMDKVSKPASRAKKVNGLDPAISSVTSGKSLLVGEEPLLVVSDSSVTDHQKKTSGKSTN 1006
            +   K +K +S A K N +     S  + K+   G +P+  +  S  T  Q K +  S+N
Sbjct: 281  VAQKKSTKSSSEANKSN-ITKKSQSPQASKNNSTGNKPVEALDSSVSTKSQSKKATGSSN 339

Query: 1007 KRKPKETKVLTKSNKVPTKQSCNPVLFEVNQNCAGTTIGPLYPPAGKSVVVVESFTKAKN 1186
            K K K  KV  +S K  T  +   +     ++     +  LYP +GKSVVVVES TKAK 
Sbjct: 340  K-KGKSPKVANESPKKQTVHTMGKI-----KSLEQRPLKKLYPSSGKSVVVVESVTKAKV 393

Query: 1187 IQRYLGDMYKVLPSFGHVRDLAGRSGSVRPDDDFSVVWEVPSDALPHLKNIKDALKGAD 1363
            IQ YLGDMY+VLPS+GHVRDLAGRSGSVRPDDDFS+VWEVPS A  HLK+IK AL GA+
Sbjct: 394  IQGYLGDMYEVLPSYGHVRDLAGRSGSVRPDDDFSMVWEVPSAAWTHLKSIKVALGGAE 452


>ref|XP_003588645.1| DNA topoisomerase, partial [Medicago truncatula]
            gi|355477693|gb|AES58896.1| DNA topoisomerase, partial
            [Medicago truncatula]
          Length = 546

 Score =  143 bits (360), Expect = 1e-31
 Identities = 87/175 (49%), Positives = 110/175 (62%)
 Frame = +2

Query: 839  KVSKPASRAKKVNGLDPAISSVTSGKSLLVGEEPLLVVSDSSVTDHQKKTSGKSTNKRKP 1018
            K  K   R+KK +  D  IS   +    +VGE   + VS  S +  +K  S +S++    
Sbjct: 162  KKKKKPVRSKKKD--DVKISPAVTDSVEVVGE---VEVSKKSASKGKKTNSKESSSISTS 216

Query: 1019 KETKVLTKSNKVPTKQSCNPVLFEVNQNCAGTTIGPLYPPAGKSVVVVESFTKAKNIQRY 1198
            KET+  + S +   K+  N    ++ +     T  PLYPP GKSV+VVES TKAK IQRY
Sbjct: 217  KETQDSSASTR-SKKKEVNSCQVDLEKPLGNFTGKPLYPPVGKSVMVVESVTKAKVIQRY 275

Query: 1199 LGDMYKVLPSFGHVRDLAGRSGSVRPDDDFSVVWEVPSDALPHLKNIKDALKGAD 1363
            LGDMY+VLPS+GHVRDLA RS SVRPDDDFS+VWEVPS A  HLK+I  AL GA+
Sbjct: 276  LGDMYEVLPSYGHVRDLASRSESVRPDDDFSMVWEVPSSAWTHLKSINAALSGAN 330


>ref|XP_003551158.1| PREDICTED: DNA topoisomerase 1-like [Glycine max]
          Length = 1070

 Score =  141 bits (356), Expect = 3e-31
 Identities = 82/151 (54%), Positives = 99/151 (65%), Gaps = 1/151 (0%)
 Frame = +2

Query: 914  KSLLVGEEPLLVVSDSSVTDHQKKTSGKSTNKRKPKETKVLTKSNKVPTKQ-SCNPVLFE 1090
            K+    E+  +  S  S   ++KK S KS  +   +E    + S K   K+ + N  L E
Sbjct: 183  KTTSTQEDGAVEASKKSSKGNKKKDSKKSLTESAIEEITENSASAKDKVKKKNGNSSLIE 242

Query: 1091 VNQNCAGTTIGPLYPPAGKSVVVVESFTKAKNIQRYLGDMYKVLPSFGHVRDLAGRSGSV 1270
              +     T  PLYPP GKSVVVVES TKAK I+RYLGDMY+VLPS+GHVRDLA RSGSV
Sbjct: 243  EAKPLWNFTYKPLYPPTGKSVVVVESVTKAKVIKRYLGDMYEVLPSYGHVRDLAARSGSV 302

Query: 1271 RPDDDFSVVWEVPSDALPHLKNIKDALKGAD 1363
            RPDDDFS+VWEVPS A  HLK+IK AL GA+
Sbjct: 303  RPDDDFSMVWEVPSPAWTHLKSIKVALSGAE 333


>emb|CAN67233.1| hypothetical protein VITISV_020021 [Vitis vinifera]
          Length = 1039

 Score =  140 bits (353), Expect = 8e-31
 Identities = 85/168 (50%), Positives = 105/168 (62%)
 Frame = +2

Query: 860  RAKKVNGLDPAISSVTSGKSLLVGEEPLLVVSDSSVTDHQKKTSGKSTNKRKPKETKVLT 1039
            +A KV  +   I  +    S   G +P+  +  S  T  Q K +  S+NK K K  KV  
Sbjct: 306  QASKVRHVSICIYELFQNNS--TGNKPVEALDSSVSTKSQSKKATGSSNK-KGKSPKVAN 362

Query: 1040 KSNKVPTKQSCNPVLFEVNQNCAGTTIGPLYPPAGKSVVVVESFTKAKNIQRYLGDMYKV 1219
            +S K  T  +   +     ++     +  LYP +GKSVVVVES TKAK IQ YLGDMY+V
Sbjct: 363  ESPKKQTVHTMGKI-----KSLEQRPLKKLYPSSGKSVVVVESVTKAKVIQGYLGDMYEV 417

Query: 1220 LPSFGHVRDLAGRSGSVRPDDDFSVVWEVPSDALPHLKNIKDALKGAD 1363
            LPS+GHVRDLAGRSGSVRPDDDFS+VWEVPS A  HLK+IK AL GA+
Sbjct: 418  LPSYGHVRDLAGRSGSVRPDDDFSMVWEVPSAAWTHLKSIKVALGGAE 465


>emb|CBI20809.3| unnamed protein product [Vitis vinifera]
          Length = 1035

 Score =  139 bits (351), Expect = 1e-30
 Identities = 80/145 (55%), Positives = 97/145 (66%)
 Frame = +2

Query: 929  GEEPLLVVSDSSVTDHQKKTSGKSTNKRKPKETKVLTKSNKVPTKQSCNPVLFEVNQNCA 1108
            G +P+  +  S  T  Q K +  S+NK K K  KV  +S K  T  +   +     ++  
Sbjct: 28   GNKPVEALDSSVSTKSQSKKATGSSNK-KGKSPKVANESPKKQTVHTMGKI-----KSLE 81

Query: 1109 GTTIGPLYPPAGKSVVVVESFTKAKNIQRYLGDMYKVLPSFGHVRDLAGRSGSVRPDDDF 1288
               +  LYP +GKSVVVVES TKAK IQ YLGDMY+VLPS+GHVRDLAGRSGSVRPDDDF
Sbjct: 82   QRPLKKLYPSSGKSVVVVESVTKAKVIQGYLGDMYEVLPSYGHVRDLAGRSGSVRPDDDF 141

Query: 1289 SVVWEVPSDALPHLKNIKDALKGAD 1363
            S+VWEVPS A  HLK+IK AL GA+
Sbjct: 142  SMVWEVPSAAWTHLKSIKVALGGAE 166


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