BLASTX nr result

ID: Papaver23_contig00000917 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Papaver23_contig00000917
         (1957 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_004145130.1| PREDICTED: 54S ribosomal protein L12, mitoch...   258   5e-66
ref|XP_002533422.1| 50S ribosomal protein L7/L12, putative [Rici...   258   5e-66
ref|XP_002304265.1| predicted protein [Populus trichocarpa] gi|2...   256   2e-65
ref|XP_003631242.1| PREDICTED: 50S ribosomal protein L7/L12-like...   249   1e-63
ref|XP_003635653.1| PREDICTED: 50S ribosomal protein L7/L12-like...   248   4e-63

>ref|XP_004145130.1| PREDICTED: 54S ribosomal protein L12, mitochondrial-like isoform 1
           [Cucumis sativus] gi|449454778|ref|XP_004145131.1|
           PREDICTED: 54S ribosomal protein L12, mitochondrial-like
           isoform 2 [Cucumis sativus]
           gi|449472279|ref|XP_004153545.1| PREDICTED: 54S
           ribosomal protein L12, mitochondrial-like isoform 1
           [Cucumis sativus] gi|449472282|ref|XP_004153546.1|
           PREDICTED: 54S ribosomal protein L12, mitochondrial-like
           isoform 2 [Cucumis sativus]
           gi|449503353|ref|XP_004161960.1| PREDICTED: 54S
           ribosomal protein L12, mitochondrial-like isoform 1
           [Cucumis sativus] gi|449503355|ref|XP_004161961.1|
           PREDICTED: 54S ribosomal protein L12, mitochondrial-like
           isoform 2 [Cucumis sativus]
          Length = 214

 Score =  258 bits (658), Expect = 5e-66
 Identities = 136/212 (64%), Positives = 171/212 (80%), Gaps = 3/212 (1%)
 Frame = +1

Query: 97  MISRLSLLRCSNGFNKF-SIPITPKPSIMGFLTRQFSLPARREEEELEM-IDQRRLPADY 270
           ++SR+S L  +   N   S  +   P     L R ++ P+R EEEE E+ IDQRRLPADY
Sbjct: 3   LVSRISHLLPNVFANTIRSSTVALNPLNRNGLHRNYAQPSRIEEEEEEVEIDQRRLPADY 62

Query: 271 DPSNFDPTEHRSPPSDRVFNLVDEVSGLTLLEISQLSAIIMKKLGMKEAPVVGVMKPGTV 450
           DP+NFDPTEHRSPP+DRVF LVDE+SGLTL+E++++S+I+MKKLGM E PV G MKPG V
Sbjct: 63  DPANFDPTEHRSPPTDRVFRLVDEISGLTLVEVAEMSSILMKKLGMTEMPVAGYMKPGAV 122

Query: 451 GVMNM-KSPSAASAKEENKPEKTVFELKLEAFEAASKIKVIKEVRSFTDLGLKEAKDLVE 627
           G+  M K  S+A+AKEE K EKTV+ELKLE++EA++KIK+IKEVRS TDLGLKEAKDLV+
Sbjct: 123 GLAGMVKKGSSATAKEEKKAEKTVYELKLESYEASAKIKIIKEVRSLTDLGLKEAKDLVD 182

Query: 628 KTPTVIKAGVTKEEGEQIIEKMKALGAKVIME 723
           K P+V+K G++KEEGEQI+EKMKALGAKVI+E
Sbjct: 183 KAPSVLKKGLSKEEGEQIVEKMKALGAKVILE 214


>ref|XP_002533422.1| 50S ribosomal protein L7/L12, putative [Ricinus communis]
           gi|223526735|gb|EEF28965.1| 50S ribosomal protein
           L7/L12, putative [Ricinus communis]
          Length = 301

 Score =  258 bits (658), Expect = 5e-66
 Identities = 134/183 (73%), Positives = 161/183 (87%), Gaps = 4/183 (2%)
 Frame = +1

Query: 187 LTRQFSLPARREEEELEM--IDQRRLPADYDPSNFDPTEHRSPPSDRVFNLVDEVSGLTL 360
           L+R ++  AR++EEE E   IDQRRLPADYDP+ FDPTEHRSPP++RVF LVDEV+GLTL
Sbjct: 120 LSRGYAQAARKDEEEEEEVEIDQRRLPADYDPATFDPTEHRSPPTERVFKLVDEVAGLTL 179

Query: 361 LEISQLSAIIMKKLGMKEAPVVGVMKPGTVGV--MNMKSPSAASAKEENKPEKTVFELKL 534
           +E+++LS+IIMKK GM E P VGV+K G  G+  M MK+P+AA AKEE KPEKTVFELKL
Sbjct: 180 VEVAELSSIIMKKRGMTELPTVGVLKGGAAGLAGMAMKAPAAA-AKEEKKPEKTVFELKL 238

Query: 535 EAFEAASKIKVIKEVRSFTDLGLKEAKDLVEKTPTVIKAGVTKEEGEQIIEKMKALGAKV 714
           E++EAASKIK+IKEVRSFTDLGLKEAKDLVEKTP+++KAGV+KEE EQIIEKMKA+GAKV
Sbjct: 239 ESYEAASKIKIIKEVRSFTDLGLKEAKDLVEKTPSILKAGVSKEEAEQIIEKMKAVGAKV 298

Query: 715 IME 723
           +ME
Sbjct: 299 VME 301


>ref|XP_002304265.1| predicted protein [Populus trichocarpa] gi|222841697|gb|EEE79244.1|
           predicted protein [Populus trichocarpa]
          Length = 216

 Score =  256 bits (653), Expect = 2e-65
 Identities = 143/219 (65%), Positives = 175/219 (79%), Gaps = 8/219 (3%)
 Frame = +1

Query: 91  ISMISRLSLLRC-SNGFN-KFSIPITPKPSIMGFLTRQFSLPARR----EEEELEMIDQR 252
           +S+ISRL    C  NGF+ K +I      +    L+R F+  AR+    EEEE+E IDQR
Sbjct: 1   MSLISRLR--HCLPNGFSTKPTISPLMPLNFNAVLSRGFAEAARKVEAEEEEEVE-IDQR 57

Query: 253 RLPADYDPSNFDPTEHRSPPSDRVFNLVDEVSGLTLLEISQLSAIIMKKLGMKEAPVVGV 432
           RLP DYDP+ FDPTEHRSPP++RVF LV+E++GLTL+EIS+L  IIMK++ M E P +GV
Sbjct: 58  RLPTDYDPATFDPTEHRSPPTERVFKLVEEIAGLTLMEISELGTIIMKRMKMTEPPTIGV 117

Query: 433 MKPGTVGV--MNMKSPSAASAKEENKPEKTVFELKLEAFEAASKIKVIKEVRSFTDLGLK 606
           +K G  G+  M MK+P+AA+AKEE K EKTVFELKLE+FEAASKIKVIKEVRSFTDLGLK
Sbjct: 118 LKGGAAGLAGMAMKAPAAAAAKEEKKAEKTVFELKLESFEAASKIKVIKEVRSFTDLGLK 177

Query: 607 EAKDLVEKTPTVIKAGVTKEEGEQIIEKMKALGAKVIME 723
           EAKDLVEKTP+V+K GV+KEEGEQIIEKMKA+GAKV++E
Sbjct: 178 EAKDLVEKTPSVLKKGVSKEEGEQIIEKMKAIGAKVVLE 216


>ref|XP_003631242.1| PREDICTED: 50S ribosomal protein L7/L12-like [Vitis vinifera]
          Length = 206

 Score =  249 bits (637), Expect = 1e-63
 Identities = 125/168 (74%), Positives = 151/168 (89%), Gaps = 1/168 (0%)
 Frame = +1

Query: 223 EEELEMIDQRRLPADYDPSNFDPTEHRSPPSDRVFNLVDEVSGLTLLEISQLSAIIMKKL 402
           EEE+E IDQRRLPADYDP+NFDPT+HRSPP+ RVF LVDE++GLTL+E+++LS+I+ KKL
Sbjct: 40  EEEVE-IDQRRLPADYDPANFDPTQHRSPPTARVFRLVDEIAGLTLVEVAELSSILRKKL 98

Query: 403 GMKEAPVVGVMKPGTVGVMNMKSPSAASA-KEENKPEKTVFELKLEAFEAASKIKVIKEV 579
           GMKE PVV +MKPG V  ++     AASA KEE KPEKTVFELKLE++EAASKIK+IKEV
Sbjct: 99  GMKEPPVVAIMKPGAVAAVSGGGMKAASAAKEEKKPEKTVFELKLESYEAASKIKIIKEV 158

Query: 580 RSFTDLGLKEAKDLVEKTPTVIKAGVTKEEGEQIIEKMKALGAKVIME 723
           RSFTDLGLKEAKDLVEK P+V+KAGV+KEEGEQ++EK+KALGAKV++E
Sbjct: 159 RSFTDLGLKEAKDLVEKAPSVLKAGVSKEEGEQLVEKLKALGAKVVLE 206


>ref|XP_003635653.1| PREDICTED: 50S ribosomal protein L7/L12-like [Vitis vinifera]
          Length = 206

 Score =  248 bits (633), Expect = 4e-63
 Identities = 124/168 (73%), Positives = 150/168 (89%), Gaps = 1/168 (0%)
 Frame = +1

Query: 223 EEELEMIDQRRLPADYDPSNFDPTEHRSPPSDRVFNLVDEVSGLTLLEISQLSAIIMKKL 402
           EEE+E IDQRRLPADYDP+NFDPT+HRSPP+ RVF LVDE++GLTL+E+++LS+I+ KKL
Sbjct: 40  EEEVE-IDQRRLPADYDPANFDPTQHRSPPTARVFRLVDEIAGLTLVEVAELSSILRKKL 98

Query: 403 GMKEAPVVGVMKPGTVGVMNMKSPSAASA-KEENKPEKTVFELKLEAFEAASKIKVIKEV 579
           GMKE PVV +MKPG    ++     AASA KEE KPEKTVFELKLE++EAASKIK+IKEV
Sbjct: 99  GMKEPPVVAIMKPGAAAAVSGGGMKAASAAKEEKKPEKTVFELKLESYEAASKIKIIKEV 158

Query: 580 RSFTDLGLKEAKDLVEKTPTVIKAGVTKEEGEQIIEKMKALGAKVIME 723
           RSFTDLGLKEAKDLVEK P+V+KAGV+KEEGEQ++EK+KALGAKV++E
Sbjct: 159 RSFTDLGLKEAKDLVEKAPSVLKAGVSKEEGEQLVEKLKALGAKVVLE 206


Top