BLASTX nr result

ID: Papaver23_contig00000273 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Papaver23_contig00000273
         (469 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|ABA40470.1| ribosomal protein S6-like protein [Solanum tubero...   127   9e-28
ref|XP_004133785.1| PREDICTED: 40S ribosomal protein S6-like [Cu...   120   9e-26
gb|ABB87117.1| unknown [Solanum tuberosum]                            120   1e-25
gb|AAZ66937.1| 117M18_18 [Brassica rapa]                              120   2e-25
ref|XP_002285752.1| PREDICTED: 40S ribosomal protein S6 [Vitis v...   120   2e-25

>gb|ABA40470.1| ribosomal protein S6-like protein [Solanum tuberosum]
          Length = 249

 Score =  127 bits (319), Expect = 9e-28
 Identities = 67/98 (68%), Positives = 73/98 (74%)
 Frame = +2

Query: 2   DDDVTKYVNTYRRSFANKKGKQTSKAPKVQRLVTPLTLQXXXXXXXXXXXXXXXXXXXXX 181
           DDDV KYVNTYRR+F NKKGK+ SKAPK+QRLVTPLTLQ                     
Sbjct: 152 DDDVRKYVNTYRRTFTNKKGKEVSKAPKIQRLVTPLTLQRKRARIADKKKRIAKAKSEAA 211

Query: 182 DYQKLLASRLKEQRDMRSESLAKKRSRLSAATKPSVAA 295
           DYQKLLASRLKEQR+ RSESLAKKRSRLSAA+KPS+AA
Sbjct: 212 DYQKLLASRLKEQRERRSESLAKKRSRLSAASKPSIAA 249


>ref|XP_004133785.1| PREDICTED: 40S ribosomal protein S6-like [Cucumis sativus]
           gi|449477988|ref|XP_004155185.1| PREDICTED: 40S
           ribosomal protein S6-like [Cucumis sativus]
          Length = 250

 Score =  120 bits (302), Expect = 9e-26
 Identities = 64/98 (65%), Positives = 71/98 (72%)
 Frame = +2

Query: 2   DDDVTKYVNTYRRSFANKKGKQTSKAPKVQRLVTPLTLQXXXXXXXXXXXXXXXXXXXXX 181
           +DDV KYVNTYRRSF  K GK+ SKAPK+QRLVTPLTLQ                     
Sbjct: 152 EDDVRKYVNTYRRSFTTKSGKKVSKAPKIQRLVTPLTLQRKRGRIAEKKKRIAKAKSEAA 211

Query: 182 DYQKLLASRLKEQRDMRSESLAKKRSRLSAATKPSVAA 295
           +YQKLLASRLKEQR+ RSESLAKKRSRLSAA+KPS+AA
Sbjct: 212 EYQKLLASRLKEQRERRSESLAKKRSRLSAASKPSIAA 249


>gb|ABB87117.1| unknown [Solanum tuberosum]
          Length = 249

 Score =  120 bits (301), Expect = 1e-25
 Identities = 64/98 (65%), Positives = 70/98 (71%)
 Frame = +2

Query: 2   DDDVTKYVNTYRRSFANKKGKQTSKAPKVQRLVTPLTLQXXXXXXXXXXXXXXXXXXXXX 181
           +DDV KYVNTYRR+F  K GK  SKAPK+QRLVTPLTLQ                     
Sbjct: 152 EDDVRKYVNTYRRNFTTKTGKNASKAPKIQRLVTPLTLQRKRARIADKKKRIAKAKSEAA 211

Query: 182 DYQKLLASRLKEQRDMRSESLAKKRSRLSAATKPSVAA 295
           DYQKLLASRLKEQR+ RSESLAKKRSRLSAA+KPS+AA
Sbjct: 212 DYQKLLASRLKEQRERRSESLAKKRSRLSAASKPSIAA 249


>gb|AAZ66937.1| 117M18_18 [Brassica rapa]
          Length = 249

 Score =  120 bits (300), Expect = 2e-25
 Identities = 65/98 (66%), Positives = 68/98 (69%)
 Frame = +2

Query: 2   DDDVTKYVNTYRRSFANKKGKQTSKAPKVQRLVTPLTLQXXXXXXXXXXXXXXXXXXXXX 181
           DDDV KYVNTYRR F NKKGK+ SKAPK+QRLVTPLTLQ                     
Sbjct: 152 DDDVRKYVNTYRRKFTNKKGKEVSKAPKIQRLVTPLTLQRKRARIADKKKRIAKANADAA 211

Query: 182 DYQKLLASRLKEQRDMRSESLAKKRSRLSAATKPSVAA 295
           DYQKLLASRLKEQRD RSESLAKKRSRLS+A    VAA
Sbjct: 212 DYQKLLASRLKEQRDRRSESLAKKRSRLSSAAAKPVAA 249


>ref|XP_002285752.1| PREDICTED: 40S ribosomal protein S6 [Vitis vinifera]
           gi|302141988|emb|CBI19191.3| unnamed protein product
           [Vitis vinifera]
          Length = 249

 Score =  120 bits (300), Expect = 2e-25
 Identities = 64/98 (65%), Positives = 71/98 (72%)
 Frame = +2

Query: 2   DDDVTKYVNTYRRSFANKKGKQTSKAPKVQRLVTPLTLQXXXXXXXXXXXXXXXXXXXXX 181
           DDDV KYVNTYRRSF  K GK+ SKAPK+QRLVTPLTLQ                     
Sbjct: 152 DDDVRKYVNTYRRSFTTKSGKKCSKAPKIQRLVTPLTLQRKRARIAEKKKRIAKAKSEAA 211

Query: 182 DYQKLLASRLKEQRDMRSESLAKKRSRLSAATKPSVAA 295
           +YQKLLA+RLKEQR+ RSESLAK+RSRLSAA+KPSVAA
Sbjct: 212 EYQKLLATRLKEQRERRSESLAKRRSRLSAASKPSVAA 249


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