BLASTX nr result

ID: Papaver23_contig00000027 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Papaver23_contig00000027
         (1318 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|ADE76954.1| unknown [Picea sitchensis]                             141   4e-31
ref|NP_001105557.1| FACT complex subunit SPT16 [Zea mays] gi|752...   140   7e-31
ref|XP_004158653.1| PREDICTED: LOW QUALITY PROTEIN: FACT complex...   140   9e-31
ref|XP_004134563.1| PREDICTED: FACT complex subunit SPT16-like [...   140   9e-31
ref|XP_001783705.1| FACT complex subunit [Physcomitrella patens ...   140   9e-31

>gb|ADE76954.1| unknown [Picea sitchensis]
          Length = 372

 Score =  141 bits (355), Expect = 4e-31
 Identities = 88/267 (32%), Positives = 139/267 (52%), Gaps = 21/267 (7%)
 Frame = +3

Query: 99  GSLEAHEWGFMFTYCGSQ--MHFKDTSVRRCFLRRGDDMMPPLLQFHFHHPIMVGTEETT 272
           G+LE+H  GF ++   ++  +     +++  F +  +  M  LL FH H+ IMVGT++T 
Sbjct: 3   GTLESHYNGFRYSTMRAEERVDVMYQNIKHAFFQPAEKEMITLLHFHLHNHIMVGTKKTK 62

Query: 273 DIQFHLV-----------------PTSVERERSDTYASGNRDEDLVDFVRRIGMVRWDSH 401
           D+QF +                  P  +E E+ +       + +   FV+R+  +   SH
Sbjct: 63  DVQFFVEVMDVVQTLGGARRSMYDPDEIEEEQQERDRKNKINAEFQAFVKRVSELWEQSH 122

Query: 402 VSFPRVEELNNCELYGVLPSYDKELTKFPVGASAVFALTFRALLLLVEIPFIVVPLDDIE 581
                   L + EL   +P  +      P  ASA    T   L+ L+EIPF+V+ + +IE
Sbjct: 123 --------LKDLELEFDIPFRELGFHGVPHKASAFIVPTVNCLVELIEIPFLVITISEIE 174

Query: 582 IVNLAKVGSGE--IDMTVVFKDFTRNVLQINSIPFASLTQMKHVLNLGCVKYYCNSKKLD 755
           IVNL +VG G+   DM +VFKDF R +L+I++IP ASL  +K  LN   +KYY +   L+
Sbjct: 175 IVNLERVGLGQKAFDMAIVFKDFKREILRIDAIPSASLDGIKEWLNSMDIKYYESRMNLN 234

Query: 756 WDSILKDILKHPKQFVDSGGWRSYDLE 836
           W  ILK I   P++F++ GGW   ++E
Sbjct: 235 WRPILKTITDDPEKFIEDGGWEFLNME 261


>ref|NP_001105557.1| FACT complex subunit SPT16 [Zea mays]
            gi|75299841|sp|Q8H6B1.1|SPT16_MAIZE RecName: Full=FACT
            complex subunit SPT16; AltName: Full=Facilitates
            chromatin transcription complex subunit SPT16; AltName:
            Full=Global transcription factor group C protein 102
            gi|24021798|gb|AAN41252.1| global transcription factor
            group C 102 [Zea mays] gi|413935251|gb|AFW69802.1| FACT
            complex subunit SPT16 isoform 1 [Zea mays]
            gi|413935252|gb|AFW69803.1| FACT complex subunit SPT16
            isoform 2 [Zea mays]
          Length = 1055

 Score =  140 bits (353), Expect = 7e-31
 Identities = 97/291 (33%), Positives = 148/291 (50%), Gaps = 30/291 (10%)
 Frame = +3

Query: 99   GSLEAHEWGFMFTYCGS--QMHFKDTSVRRCFLRRGDDMMPPLLQFHFHHPIMVGTEETT 272
            G+LEAH  GF ++   S  ++     +++  F +  +  M  LL FH H+ IMVG ++T 
Sbjct: 683  GNLEAHFNGFRYSTSRSDERVDIMFGNIKHAFFQPAEKEMITLLHFHLHNHIMVGNKKTK 742

Query: 273  DIQFH-----------------LVPTSVERERSDTYASGNRDEDLVDFVRRIGMVRWDSH 401
            D+QF+                 L P  +E E+ +       + D  +FV ++     + H
Sbjct: 743  DVQFYVEVMDVVQTLGGSRRSALDPDEIEEEQRERDRKNRINMDFQNFVNKV-----NDH 797

Query: 402  VSFPRVEELNNCELYGVLPSYDKELTKFPVGASAVFALTFRALLLLVEIPFIVVPLDDIE 581
             S P+ + L   +L   +P  +      P  ASA    T   L+ L+E PF+VV L +IE
Sbjct: 798  WSQPQFKGL---DLEFDVPLRELGFHGVPYKASAFIIPTSTCLVELIETPFLVVSLSEIE 854

Query: 582  IVNLAKVGSG--EIDMTVVFKDFTRNVLQINSIPFASLTQMKHVLNLGCVKYYCNSKKLD 755
            IVNL +VG G    DM +VFKDF ++VL+I+SIP ASL  +K  L+   +KYY +   L+
Sbjct: 855  IVNLERVGFGTKNFDMAIVFKDFKKDVLRIDSIPSASLDAIKEWLDTTDLKYYESRLNLN 914

Query: 756  WDSILKDILKHPKQFVDSGGWRSYDLE---------DECTLSYYDEIAEPK 881
            W  ILK I+  P++F+D GGW   ++E         +E    Y    AEP+
Sbjct: 915  WRPILKTIIDDPQKFIDDGGWEFLNMEASDSETEDTEESDQGYVPSDAEPE 965


>ref|XP_004158653.1| PREDICTED: LOW QUALITY PROTEIN: FACT complex subunit SPT16-like
            [Cucumis sativus]
          Length = 1073

 Score =  140 bits (352), Expect = 9e-31
 Identities = 93/259 (35%), Positives = 139/259 (53%), Gaps = 13/259 (5%)
 Frame = +3

Query: 99   GSLEAHEWGFMFTYCGSQ--MHFKDTSVRRCFLRRGDDMMPPLLQFHFHHPIMVGTEETT 272
            G+LEAH  GF +    S+  +     +V+  F +  ++ M  LL FH H+ IMVG ++T 
Sbjct: 705  GTLEAHLNGFRYATTRSEERVDIMFGNVKHAFFQPAENEMITLLHFHLHNHIMVGNKKTK 764

Query: 273  DIQFHLVPTSVERERSDTYASGNRDEDLVDFVR---RIGMVRWDSHVSFPRVEELNNCEL 443
            D+QF++    V +       S    +++ +  R   R   +  D      RV +L     
Sbjct: 765  DVQFYVEVMDVVQTIGGGKRSAYDPDEIEEEQRERDRKNKINMDFQSFVNRVNDLWGQPQ 824

Query: 444  YGVLP-SYDKELTKF-----PVGASAVFALTFRALLLLVEIPFIVVPLDDIEIVNLAKVG 605
            +G L   +D+ L +      P  +SA    T   L+ L+E PF+VV L +IEIVNL +VG
Sbjct: 825  FGGLDLEFDQPLRELGFHGVPYKSSAFIVPTSTCLVELIETPFLVVTLGEIEIVNLERVG 884

Query: 606  SGE--IDMTVVFKDFTRNVLQINSIPFASLTQMKHVLNLGCVKYYCNSKKLDWDSILKDI 779
             G+   DMT+VFKDF R+VL+I+SIP  SL  +K  L+   +KYY +   L+W  ILK I
Sbjct: 885  FGQKNFDMTIVFKDFKRDVLRIDSIPSTSLDGIKEWLDTTDIKYYESKLNLNWRQILKTI 944

Query: 780  LKHPKQFVDSGGWRSYDLE 836
             + P+ F+D GGW   +LE
Sbjct: 945  TEDPQSFIDEGGWEFLNLE 963


>ref|XP_004134563.1| PREDICTED: FACT complex subunit SPT16-like [Cucumis sativus]
          Length = 1073

 Score =  140 bits (352), Expect = 9e-31
 Identities = 93/259 (35%), Positives = 139/259 (53%), Gaps = 13/259 (5%)
 Frame = +3

Query: 99   GSLEAHEWGFMFTYCGSQ--MHFKDTSVRRCFLRRGDDMMPPLLQFHFHHPIMVGTEETT 272
            G+LEAH  GF +    S+  +     +V+  F +  ++ M  LL FH H+ IMVG ++T 
Sbjct: 705  GTLEAHLNGFRYATTRSEERVDIMFGNVKHAFFQPAENEMITLLHFHLHNHIMVGNKKTK 764

Query: 273  DIQFHLVPTSVERERSDTYASGNRDEDLVDFVR---RIGMVRWDSHVSFPRVEELNNCEL 443
            D+QF++    V +       S    +++ +  R   R   +  D      RV +L     
Sbjct: 765  DVQFYVEVMDVVQTIGGGKRSAYDPDEIEEEQRERDRKNKINMDFQSFVNRVNDLWGQPQ 824

Query: 444  YGVLP-SYDKELTKF-----PVGASAVFALTFRALLLLVEIPFIVVPLDDIEIVNLAKVG 605
            +G L   +D+ L +      P  +SA    T   L+ L+E PF+VV L +IEIVNL +VG
Sbjct: 825  FGGLDLEFDQPLRELGFHGVPYKSSAFIVPTSTCLVELIETPFLVVTLGEIEIVNLERVG 884

Query: 606  SGE--IDMTVVFKDFTRNVLQINSIPFASLTQMKHVLNLGCVKYYCNSKKLDWDSILKDI 779
             G+   DMT+VFKDF R+VL+I+SIP  SL  +K  L+   +KYY +   L+W  ILK I
Sbjct: 885  FGQKNFDMTIVFKDFKRDVLRIDSIPSTSLDGIKEWLDTTDIKYYESKLNLNWRQILKTI 944

Query: 780  LKHPKQFVDSGGWRSYDLE 836
             + P+ F+D GGW   +LE
Sbjct: 945  TEDPQSFIDEGGWEFLNLE 963


>ref|XP_001783705.1| FACT complex subunit [Physcomitrella patens subsp. patens]
            gi|162664770|gb|EDQ51477.1| FACT complex subunit
            [Physcomitrella patens subsp. patens]
          Length = 1065

 Score =  140 bits (352), Expect = 9e-31
 Identities = 91/267 (34%), Positives = 141/267 (52%), Gaps = 21/267 (7%)
 Frame = +3

Query: 99   GSLEAHEWGFMFTYCGSQ--MHFKDTSVRRCFLRRGDDMMPPLLQFHFHHPIMVGTEETT 272
            G+LEAH  GF ++    +  +     +++  F +  +  M  L+ FH H+ IMVGT++T 
Sbjct: 693  GTLEAHTNGFRYSTMRQEEKVDIMYRNIKHAFFQPAEKEMITLVHFHLHNYIMVGTKKTK 752

Query: 273  DIQFHLV-----------------PTSVERERSDTYASGNRDEDLVDFVRRIGMVRWDSH 401
            D+QF++                  P  +E E+ +       +++   FV+R+  + WD  
Sbjct: 753  DVQFYVEVMEVVQTLGGSRRSMMDPDEIEEEQQERDRRNKINKEFEAFVKRMAEL-WDQ- 810

Query: 402  VSFPRVEELNNCELYGVLPSYDKELTKFPVGASAVFALTFRALLLLVEIPFIVVPLDDIE 581
               P   EL   +L   +P  +      P  +SA    T   L+ L+E PF+VV L+DIE
Sbjct: 811  ---PPWREL---DLEFDIPFRELGFHGVPNKSSAFIVPTVNCLVELIETPFLVVSLNDIE 864

Query: 582  IVNLAKVGSGE--IDMTVVFKDFTRNVLQINSIPFASLTQMKHVLNLGCVKYYCNSKKLD 755
            IVNL +VG G+   DM +VFKDF R VL+I++IP  SL  +K  LN   +KYY +   L+
Sbjct: 865  IVNLERVGLGQKAFDMAIVFKDFKREVLRIDAIPSTSLDGIKEWLNSMNIKYYESRMNLN 924

Query: 756  WDSILKDILKHPKQFVDSGGWRSYDLE 836
            W  ILK IL+ P +F++ GGW   ++E
Sbjct: 925  WRPILKTILEDPDKFIEDGGWEFLNME 951


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