BLASTX nr result

ID: Papaver22_contig00037186 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Papaver22_contig00037186
         (458 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

dbj|BAB08714.1| non-LTR retroelement reverse transcriptase-like ...    64   1e-08
ref|XP_002450418.1| hypothetical protein SORBIDRAFT_05g005061 [S...    64   2e-08
ref|XP_002467234.1| hypothetical protein SORBIDRAFT_01g021750 [S...    64   2e-08
gb|AAB82639.1| putative non-LTR retroelement reverse transcripta...    62   4e-08
emb|CCA66036.1| hypothetical protein [Beta vulgaris subsp. vulga...    61   1e-07

>dbj|BAB08714.1| non-LTR retroelement reverse transcriptase-like protein
           [Arabidopsis thaliana]
          Length = 1197

 Score = 64.3 bits (155), Expect = 1e-08
 Identities = 34/90 (37%), Positives = 57/90 (63%), Gaps = 1/90 (1%)
 Frame = -2

Query: 268 IAWNCQGLGNTYKPKTISSLKDLLNQENPDIIFVSETKQQTGNVEQILLRLNLHNYWIVP 89
           ++WNCQG+GN   PKT+  ++++L + +PD+IF+ ET  Q   V + L  L  +N+++V 
Sbjct: 1   MSWNCQGIGN---PKTVRRVREILKKLSPDVIFLMETMNQDEVVLKKLDFLKRYNHFLVS 57

Query: 88  PKGIAR-GLFLAWKDNVKLTILDYKHNQIN 2
           P G  + GL L WK +V++ I+    N I+
Sbjct: 58  PSGQGKGGLALFWKHDVEMAIVSSCDNFID 87


>ref|XP_002450418.1| hypothetical protein SORBIDRAFT_05g005061 [Sorghum bicolor]
           gi|241936261|gb|EES09406.1| hypothetical protein
           SORBIDRAFT_05g005061 [Sorghum bicolor]
          Length = 753

 Score = 63.5 bits (153), Expect = 2e-08
 Identities = 32/92 (34%), Positives = 51/92 (55%)
 Frame = -2

Query: 277 IKTIAWNCQGLGNTYKPKTISSLKDLLNQENPDIIFVSETKQQTGNVEQILLRLNLHNYW 98
           +KT+ WNC+G+GN   P T+  L+DL     P ++F+ ET+     VE +   L+  N +
Sbjct: 1   MKTLCWNCRGIGN---PATVKELRDLAKDYAPSVMFIMETQISKYRVENLRYTLSFDNSF 57

Query: 97  IVPPKGIARGLFLAWKDNVKLTILDYKHNQIN 2
            V   G + GL L W ++V L+I  Y +  I+
Sbjct: 58  AVNSSGRSGGLGLFWNNDVLLSIQKYSNYHID 89


>ref|XP_002467234.1| hypothetical protein SORBIDRAFT_01g021750 [Sorghum bicolor]
           gi|241921088|gb|EER94232.1| hypothetical protein
           SORBIDRAFT_01g021750 [Sorghum bicolor]
          Length = 426

 Score = 63.5 bits (153), Expect = 2e-08
 Identities = 29/88 (32%), Positives = 50/88 (56%)
 Frame = -2

Query: 268 IAWNCQGLGNTYKPKTISSLKDLLNQENPDIIFVSETKQQTGNVEQILLRLNLHNYWIVP 89
           ++WNC+G G + +   ++ L  LL      + F+SET+  T +   ++ R N  + +I+P
Sbjct: 4   LSWNCRGSGGSLRSSKMNHLARLLTSTKSQVCFISETRNSTISRTSLINRFNALDAFIIP 63

Query: 88  PKGIARGLFLAWKDNVKLTILDYKHNQI 5
            +G + GL+L WK +  LTI+D   N I
Sbjct: 64  AQGQSGGLWLIWKQDFSLTIVDQSPNYI 91


>gb|AAB82639.1| putative non-LTR retroelement reverse transcriptase [Arabidopsis
           thaliana]
          Length = 1374

 Score = 62.4 bits (150), Expect = 4e-08
 Identities = 29/84 (34%), Positives = 52/84 (61%)
 Frame = -2

Query: 277 IKTIAWNCQGLGNTYKPKTISSLKDLLNQENPDIIFVSETKQQTGNVEQILLRLNLHNYW 98
           ++ ++WNCQG+GNT    T+  L+++     P++IF+ ETK++   +E ++  L   +  
Sbjct: 1   MRILSWNCQGVGNT---PTVRHLREIRGLYFPEVIFLCETKKRRNYLENVVGHLGFFDLH 57

Query: 97  IVPPKGIARGLFLAWKDNVKLTIL 26
            V P G + GL L WKD+V++ +L
Sbjct: 58  TVEPIGKSGGLALMWKDSVQIKVL 81


>emb|CCA66036.1| hypothetical protein [Beta vulgaris subsp. vulgaris]
          Length = 1369

 Score = 60.8 bits (146), Expect = 1e-07
 Identities = 30/93 (32%), Positives = 54/93 (58%), Gaps = 4/93 (4%)
 Frame = -2

Query: 268 IAWNCQGLGNTYKPKTISSLKDLLNQENPDIIFVSETKQQTGNVEQILLRLNLHNYWIVP 89
           ++WNC+G+G+   P  +S+L+ LL  ENP I+F+SETK ++  +E +  +L   +   V 
Sbjct: 5   LSWNCRGMGS---PSALSALRRLLASENPQIVFLSETKLKSYEMESVKKKLKWEHMVAVD 61

Query: 88  PKGIAR----GLFLAWKDNVKLTILDYKHNQIN 2
            +G  R    GL + W+  +K+ ++    N I+
Sbjct: 62  CEGECRKRRGGLAMLWRSEIKVQVMSMSSNHID 94


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