BLASTX nr result

ID: Papaver22_contig00035976 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Papaver22_contig00035976
         (686 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002527133.1| ATP-dependent RNA helicase, putative [Ricinu...   303   3e-80
ref|XP_003542053.1| PREDICTED: pre-mRNA-splicing factor ATP-depe...   301   6e-80
ref|XP_002264955.2| PREDICTED: pre-mRNA-splicing factor ATP-depe...   300   2e-79
ref|XP_002462912.1| hypothetical protein SORBIDRAFT_02g034295 [S...   286   3e-75
dbj|BAK00252.1| predicted protein [Hordeum vulgare subsp. vulgare]    284   1e-74

>ref|XP_002527133.1| ATP-dependent RNA helicase, putative [Ricinus communis]
            gi|223533556|gb|EEF35296.1| ATP-dependent RNA helicase,
            putative [Ricinus communis]
          Length = 1269

 Score =  303 bits (775), Expect = 3e-80
 Identities = 161/253 (63%), Positives = 188/253 (74%), Gaps = 26/253 (10%)
 Frame = -1

Query: 683  LVSPWMGGDTPSA--AVSSSWDFVSPSPVPIRAVGNC---KGNAAGERXXXXXXXXXXM- 522
            LVSPW+GG TPS+  + +S WD ++PSPVPIRA G+     G+  GER            
Sbjct: 256  LVSPWLGGHTPSSTGSAASPWDHIAPSPVPIRASGSSAKSSGSRHGERSHQLTFSSTSSR 315

Query: 521  --------------------TEDLRLQMEYEADRAWYDRDDEGNTAFDGDGSLAFLGDEA 402
                                TE++RL+MEY +DRAWYDR+ EG+T FD D S  +LGDEA
Sbjct: 316  PLEGEREDKPYTSEEHHHEITENMRLEMEYNSDRAWYDRE-EGSTMFDADSSSFYLGDEA 374

Query: 401  SFTKKKAEMAKKLVRRDGSLMSLAQSKKLSQRTKDNAQWEDRQLLRSGAVRGTNVQTEFE 222
            SF KK+AE+AK+LVRRDGS M+LAQSK+LSQ T DNAQWEDRQLLRSGAVRGT VQTEF+
Sbjct: 375  SFQKKEAELAKRLVRRDGSRMTLAQSKRLSQLTADNAQWEDRQLLRSGAVRGTEVQTEFD 434

Query: 221  DEDECRFNLLIHDTKPNFLDERVVFTKQADPIVPLKDPTSDMAIISRKGSALVREIHEKR 42
            DEDE +  LL+HDTKP FLD RVVFTKQA+PI+P+KDPTSDMAIISRKGSALVREIHEK+
Sbjct: 435  DEDERKVILLVHDTKPPFLDGRVVFTKQAEPIMPIKDPTSDMAIISRKGSALVREIHEKQ 494

Query: 41   MQNKSRQRFWELA 3
              NKSRQRFWELA
Sbjct: 495  SMNKSRQRFWELA 507


>ref|XP_003542053.1| PREDICTED: pre-mRNA-splicing factor ATP-dependent RNA helicase
            PRP16-like [Glycine max]
          Length = 1270

 Score =  301 bits (772), Expect = 6e-80
 Identities = 163/253 (64%), Positives = 187/253 (73%), Gaps = 26/253 (10%)
 Frame = -1

Query: 683  LVSPWMGGDTPSAAVSSS--WDFVSPSPVPIRAVG------------------------N 582
            LVSPW+GG TP ++ +SS  WD VSPSPVPIRA G                        N
Sbjct: 258  LVSPWLGGHTPHSSFTSSSPWDHVSPSPVPIRASGSSTKSSVSKHNGRSHQLSFSSETSN 317

Query: 581  CKGNAAGERXXXXXXXXXXMTEDLRLQMEYEADRAWYDRDDEGNTAFDGDGSLAFLGDEA 402
               +   ++          +TE +RL+MEY+ADRAWYDR +EG+T FDGD S  FLGDEA
Sbjct: 318  RYEDEVADKSDLGEEHKYEITESMRLEMEYDADRAWYDR-EEGST-FDGDNSSLFLGDEA 375

Query: 401  SFTKKKAEMAKKLVRRDGSLMSLAQSKKLSQRTKDNAQWEDRQLLRSGAVRGTNVQTEFE 222
            SF KK+AE+AK+LVRRDG+ MSLAQSKKLSQ T DNAQWEDRQLLRSGAVRGT VQTEF+
Sbjct: 376  SFQKKEAELAKRLVRRDGTKMSLAQSKKLSQLTADNAQWEDRQLLRSGAVRGTEVQTEFD 435

Query: 221  DEDECRFNLLIHDTKPNFLDERVVFTKQADPIVPLKDPTSDMAIISRKGSALVREIHEKR 42
            DE+E +  LL+HDTKP FLD RVVFTKQA+PI+PLKDPTSDMAIISRKGS LVREIHEK+
Sbjct: 436  DEEEHKVILLVHDTKPPFLDGRVVFTKQAEPIMPLKDPTSDMAIISRKGSTLVREIHEKQ 495

Query: 41   MQNKSRQRFWELA 3
              NKSRQRFWELA
Sbjct: 496  SMNKSRQRFWELA 508


>ref|XP_002264955.2| PREDICTED: pre-mRNA-splicing factor ATP-dependent RNA helicase
            PRP16-like [Vitis vinifera]
          Length = 1289

 Score =  300 bits (767), Expect = 2e-79
 Identities = 159/250 (63%), Positives = 184/250 (73%), Gaps = 23/250 (9%)
 Frame = -1

Query: 683  LVSPWMGGDTP--SAAVSSSWDFVSPSPVPIRAVGNCKGNAAG----------------- 561
            LVSPW GG TP  + + +S WD +SPSPVPIRA G    +++                  
Sbjct: 279  LVSPWFGGQTPHTTGSAASPWDTISPSPVPIRASGASVRSSSSKHSGRSHQLNFSVENLQ 338

Query: 560  ----ERXXXXXXXXXXMTEDLRLQMEYEADRAWYDRDDEGNTAFDGDGSLAFLGDEASFT 393
                +           +TE +RL+MEY +DRAWYDR +EGNT FDG  S  FLGDEASF 
Sbjct: 339  SFEDKEDDKSYLANQEITESMRLEMEYNSDRAWYDR-EEGNTMFDGGTSSFFLGDEASFQ 397

Query: 392  KKKAEMAKKLVRRDGSLMSLAQSKKLSQRTKDNAQWEDRQLLRSGAVRGTNVQTEFEDED 213
            KK+AE+AKKLVRRDG+ M+LAQSKKLSQ T DNAQWEDRQLLRSGAVRGT VQTEF+DE+
Sbjct: 398  KKEAELAKKLVRRDGTKMTLAQSKKLSQLTADNAQWEDRQLLRSGAVRGTEVQTEFDDEE 457

Query: 212  ECRFNLLIHDTKPNFLDERVVFTKQADPIVPLKDPTSDMAIISRKGSALVREIHEKRMQN 33
            E +  LL+HDTKP FLD RVVFTKQA+PI+PLKDPTSDMAIISRKGSALVRE+HEK+  N
Sbjct: 458  ERKVILLVHDTKPPFLDGRVVFTKQAEPIMPLKDPTSDMAIISRKGSALVREVHEKQSMN 517

Query: 32   KSRQRFWELA 3
            KSRQRFWELA
Sbjct: 518  KSRQRFWELA 527


>ref|XP_002462912.1| hypothetical protein SORBIDRAFT_02g034295 [Sorghum bicolor]
            gi|241926289|gb|EER99433.1| hypothetical protein
            SORBIDRAFT_02g034295 [Sorghum bicolor]
          Length = 1271

 Score =  286 bits (731), Expect = 3e-75
 Identities = 152/249 (61%), Positives = 182/249 (73%), Gaps = 22/249 (8%)
 Frame = -1

Query: 683  LVSPWMGGDTPSAAVSSSWDFVSPSPVPIRAVGNCKGNAAG------------------- 561
            LVSPW+GG TP +A +S WD VSPSP PIRA G+ KG++                     
Sbjct: 264  LVSPWLGGSTPRSA-ASPWDNVSPSPAPIRASGSSKGSSYSHSSGRSHQLSFSSTTSSNI 322

Query: 560  ---ERXXXXXXXXXXMTEDLRLQMEYEADRAWYDRDDEGNTAFDGDGSLAFLGDEASFTK 390
               +R          +TE++  +M+Y ADRAWYD + E  T FDGD S+ +LGD+ S+ K
Sbjct: 323  FDADRSPSNPDRNYEITEEMMQEMDYNADRAWYDCE-EHTTMFDGDNSM-YLGDDNSYKK 380

Query: 389  KKAEMAKKLVRRDGSLMSLAQSKKLSQRTKDNAQWEDRQLLRSGAVRGTNVQTEFEDEDE 210
            K+AEM KKL RRDGSLM+LAQSKKLSQ T DNAQWEDRQLLRSGAV+GT VQTEF+DE+E
Sbjct: 381  KEAEMPKKLTRRDGSLMTLAQSKKLSQMTADNAQWEDRQLLRSGAVKGTEVQTEFDDEEE 440

Query: 209  CRFNLLIHDTKPNFLDERVVFTKQADPIVPLKDPTSDMAIISRKGSALVREIHEKRMQNK 30
             +  LL+HDTKP FLD RVVFTKQA+P++PLKDPTSDMAII+RKGS+LVREI EK+  NK
Sbjct: 441  RKVILLVHDTKPPFLDGRVVFTKQAEPVMPLKDPTSDMAIIARKGSSLVREIREKQSMNK 500

Query: 29   SRQRFWELA 3
            SRQRFWELA
Sbjct: 501  SRQRFWELA 509


>dbj|BAK00252.1| predicted protein [Hordeum vulgare subsp. vulgare]
          Length = 1263

 Score =  284 bits (727), Expect = 1e-74
 Identities = 149/244 (61%), Positives = 179/244 (73%), Gaps = 17/244 (6%)
 Frame = -1

Query: 683 LVSPWMGGDTPSAAVSSSWDFVSPSPVPIRAVGNCKGN-----------------AAGER 555
           LVSPW+GG TP  AVS  WD VSPSP P+RA G+ KG+                 A  +R
Sbjct: 263 LVSPWLGGHTPRYAVSP-WDHVSPSPAPVRASGSSKGSSYSSSSGRSHQLTFSNDAEADR 321

Query: 554 XXXXXXXXXXMTEDLRLQMEYEADRAWYDRDDEGNTAFDGDGSLAFLGDEASFTKKKAEM 375
                     +TE++  +M+Y ADRAWYD + E NT FDGD    +  D++S+ KK+A++
Sbjct: 322 SLSAADRNYEITEEMMQEMDYNADRAWYDCE-EHNTVFDGDN---YAADDSSYKKKEAQL 377

Query: 374 AKKLVRRDGSLMSLAQSKKLSQRTKDNAQWEDRQLLRSGAVRGTNVQTEFEDEDECRFNL 195
            KKL R+DGSLM+L+QSKKLSQ T DNAQWEDRQLLRSGAVRGT VQTEF+DEDE +  L
Sbjct: 378 PKKLTRKDGSLMTLSQSKKLSQMTADNAQWEDRQLLRSGAVRGTEVQTEFDDEDERKVIL 437

Query: 194 LIHDTKPNFLDERVVFTKQADPIVPLKDPTSDMAIISRKGSALVREIHEKRMQNKSRQRF 15
           L+HDTKP FLD RVV+TKQA+P++PLKDPTSDMAII+RKGS LVREI EK+ QNKSRQRF
Sbjct: 438 LVHDTKPPFLDGRVVYTKQAEPVMPLKDPTSDMAIIARKGSVLVREIREKQSQNKSRQRF 497

Query: 14  WELA 3
           WELA
Sbjct: 498 WELA 501


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