BLASTX nr result
ID: Papaver22_contig00035458
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Papaver22_contig00035458
(597 letters)
Database: ./nr
23,641,837 sequences; 8,123,359,852 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gb|ABD63147.1| Integrase core domain containing protein [Asparag... 155 6e-52
gb|ABE60891.1| putative polyprotein [Oryza sativa Japonica Group] 122 4e-37
ref|NP_001063540.1| Os09g0491900 [Oryza sativa Japonica Group] g... 122 4e-37
gb|AAT85159.1| unknown protein [Oryza sativa Japonica Group] gi|... 122 4e-37
gb|ABI96971.1| putative gag-pol polyprotein [Triticum monococcum... 115 9e-37
>gb|ABD63147.1| Integrase core domain containing protein [Asparagus officinalis]
Length = 870
Score = 155 bits (393), Expect(2) = 6e-52
Identities = 75/118 (63%), Positives = 90/118 (76%)
Frame = +1
Query: 244 SNKKMGLYTPLPVPSRPWESISIDFLGGLNTTKTGIDYIFIIVDHFSKMALMIPCRKMVT 423
SN K GLY LPVPSR WESIS+DFLGGL + K G DY++I+VD FSK+ ++IPC+K VT
Sbjct: 479 SNGKRGLYLLLPVPSRSWESISMDFLGGLPSKKCGHDYLYIVVDRFSKVVILIPCKKTVT 538
Query: 424 PEGAASLFFQHVFVHFGLPCSIISDRDNIFLSSF*KNLWCIMDTKPKRSTAFRPQTDG 597
GAA LFF+HV+ HFGLP II DRD+ FL F +LW +MDTK K+S AF PQTDG
Sbjct: 539 GVGAAQLFFEHVWKHFGLPSLIILDRDSRFLGHFWDSLWSLMDTKLKKSMAFHPQTDG 596
Score = 74.3 bits (181), Expect(2) = 6e-52
Identities = 34/69 (49%), Positives = 50/69 (72%), Gaps = 1/69 (1%)
Frame = +2
Query: 35 DGLMFKENKLCIPPE-FRLTLIREAHTSLVAGHFVVKKTLENL*RYVYCPGMIREIERFV 211
DGL+++E LCIP + +RL LIREAHTS V G+F ++K L NL R ++ P M+ ++ ++V
Sbjct: 408 DGLLYRETSLCIPEDGYRLQLIREAHTSRVQGNFGIQKMLLNLRRLMFWPWMLDDVTKYV 467
Query: 212 KGCAICCTS 238
GC +CC S
Sbjct: 468 GGCKLCCIS 476
>gb|ABE60891.1| putative polyprotein [Oryza sativa Japonica Group]
Length = 1713
Score = 122 bits (305), Expect(2) = 4e-37
Identities = 63/113 (55%), Positives = 73/113 (64%)
Frame = +1
Query: 259 GLYTPLPVPSRPWESISIDFLGGLNTTKTGIDYIFIIVDHFSKMALMIPCRKMVTPEGAA 438
GLYTPLPVPS PWE IS+DF+ GL TK G D IF++VD FSKMA IPC K A
Sbjct: 1255 GLYTPLPVPSAPWEDISMDFVLGLPRTKRGRDSIFVVVDRFSKMAHFIPCHKSDDASHIA 1314
Query: 439 SLFFQHVFVHFGLPCSIISDRDNIFLSSF*KNLWCIMDTKPKRSTAFRPQTDG 597
SLFF + G+P +I+SDRD FLS F K LW + T+ ST PQTDG
Sbjct: 1315 SLFFSEIVRLHGMPKTIVSDRDTKFLSYFWKTLWAKLGTRLLFSTTCHPQTDG 1367
Score = 58.5 bits (140), Expect(2) = 4e-37
Identities = 28/68 (41%), Positives = 41/68 (60%), Gaps = 1/68 (1%)
Frame = +2
Query: 29 ISDGLMFKENKLCIPP-EFRLTLIREAHTSLVAGHFVVKKTLENL*RYVYCPGMIREIER 205
I DG +F+ NKLC+P RL L++E H + GHF +KT + L + Y P M R+++R
Sbjct: 1177 IHDGFLFRANKLCVPHCSVRLLLLQETHAGGLMGHFGWRKTYDMLADHFYWPKMRRDVQR 1236
Query: 206 FVKGCAIC 229
V+ C C
Sbjct: 1237 LVQRCVTC 1244
>ref|NP_001063540.1| Os09g0491900 [Oryza sativa Japonica Group]
gi|113631773|dbj|BAF25454.1| Os09g0491900 [Oryza sativa
Japonica Group]
Length = 681
Score = 122 bits (305), Expect(2) = 4e-37
Identities = 63/113 (55%), Positives = 73/113 (64%)
Frame = +1
Query: 259 GLYTPLPVPSRPWESISIDFLGGLNTTKTGIDYIFIIVDHFSKMALMIPCRKMVTPEGAA 438
GLYTPLPVPS PWE IS+DF+ GL TK G D IF++VD FSKMA IPC K A
Sbjct: 223 GLYTPLPVPSAPWEDISMDFVLGLPRTKRGRDSIFVVVDRFSKMAHFIPCHKSDDASHIA 282
Query: 439 SLFFQHVFVHFGLPCSIISDRDNIFLSSF*KNLWCIMDTKPKRSTAFRPQTDG 597
SLFF + G+P +I+SDRD FLS F K LW + T+ ST PQTDG
Sbjct: 283 SLFFSEIVRLHGMPKTIVSDRDTKFLSYFWKTLWAKLGTRLLFSTTCHPQTDG 335
Score = 58.5 bits (140), Expect(2) = 4e-37
Identities = 28/68 (41%), Positives = 41/68 (60%), Gaps = 1/68 (1%)
Frame = +2
Query: 29 ISDGLMFKENKLCIPP-EFRLTLIREAHTSLVAGHFVVKKTLENL*RYVYCPGMIREIER 205
I DG +F+ NKLC+P RL L++E H + GHF +KT + L + Y P M R+++R
Sbjct: 145 IHDGFLFRANKLCVPHCSVRLLLLQETHAGGLMGHFGWRKTYDMLADHFYWPKMRRDVQR 204
Query: 206 FVKGCAIC 229
V+ C C
Sbjct: 205 LVQRCVTC 212
>gb|AAT85159.1| unknown protein [Oryza sativa Japonica Group]
gi|52353557|gb|AAU44123.1| putative polyprotein [Oryza
sativa Japonica Group]
Length = 681
Score = 122 bits (305), Expect(2) = 4e-37
Identities = 63/113 (55%), Positives = 73/113 (64%)
Frame = +1
Query: 259 GLYTPLPVPSRPWESISIDFLGGLNTTKTGIDYIFIIVDHFSKMALMIPCRKMVTPEGAA 438
GLYTPLPVPS PWE IS+DF+ GL TK G D IF++VD FSKMA IPC K A
Sbjct: 223 GLYTPLPVPSAPWEDISMDFVLGLPRTKRGRDSIFVVVDRFSKMAHFIPCHKSDDASHIA 282
Query: 439 SLFFQHVFVHFGLPCSIISDRDNIFLSSF*KNLWCIMDTKPKRSTAFRPQTDG 597
SLFF + G+P +I+SDRD FLS F K LW + T+ ST PQTDG
Sbjct: 283 SLFFSEIVRLHGMPKTIVSDRDTKFLSYFWKTLWAKLGTRLLFSTTCHPQTDG 335
Score = 58.5 bits (140), Expect(2) = 4e-37
Identities = 28/68 (41%), Positives = 41/68 (60%), Gaps = 1/68 (1%)
Frame = +2
Query: 29 ISDGLMFKENKLCIPP-EFRLTLIREAHTSLVAGHFVVKKTLENL*RYVYCPGMIREIER 205
I DG +F+ NKLC+P RL L++E H + GHF +KT + L + Y P M R+++R
Sbjct: 145 IHDGFLFRANKLCVPHCSVRLLLLQETHAGGLMGHFGWRKTYDMLADHFYWPKMRRDVQR 204
Query: 206 FVKGCAIC 229
V+ C C
Sbjct: 205 LVQRCVTC 212
>gb|ABI96971.1| putative gag-pol polyprotein [Triticum monococcum subsp.
aegilopoides]
Length = 1704
Score = 115 bits (288), Expect(2) = 9e-37
Identities = 60/113 (53%), Positives = 71/113 (62%)
Frame = +1
Query: 259 GLYTPLPVPSRPWESISIDFLGGLNTTKTGIDYIFIIVDHFSKMALMIPCRKMVTPEGAA 438
GLY PLPVPS PWE IS+DF+ GL TK G D IF++VD FSKMA IPC K A
Sbjct: 1296 GLYMPLPVPSVPWEDISMDFVLGLPRTKKGRDSIFVVVDRFSKMAHFIPCHKSDDAVNVA 1355
Query: 439 SLFFQHVFVHFGLPCSIISDRDNIFLSSF*KNLWCIMDTKPKRSTAFRPQTDG 597
LFF+ + G+P +I+SDRD FLS F + LW + K ST PQTDG
Sbjct: 1356 DLFFREIIRLHGVPNTIVSDRDTKFLSHFWRCLWAKLGNKLLFSTTCHPQTDG 1408
Score = 63.9 bits (154), Expect(2) = 9e-37
Identities = 32/68 (47%), Positives = 44/68 (64%), Gaps = 1/68 (1%)
Frame = +2
Query: 29 ISDGLMFKENKLCIPPE-FRLTLIREAHTSLVAGHFVVKKTLENL*RYVYCPGMIREIER 205
++DG +F+ NKLCIP RL L++EAH + GHF VKKT + L + + P M R++ER
Sbjct: 1218 LNDGFVFRANKLCIPASSVRLLLLQEAHGGGLMGHFGVKKTEDILATHFFWPKMRRDVER 1277
Query: 206 FVKGCAIC 229
FV C C
Sbjct: 1278 FVARCTTC 1285