BLASTX nr result

ID: Papaver22_contig00035138 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Papaver22_contig00035138
         (684 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002312051.1| predicted protein [Populus trichocarpa] gi|2...   143   4e-32
ref|XP_002281393.1| PREDICTED: UPF0405 protein C3orf75 homolog [...   138   9e-31
ref|NP_567351.1| elongator protein 6 [Arabidopsis thaliana] gi|7...   137   2e-30
ref|XP_004163069.1| PREDICTED: elongator complex protein 6-like ...   137   3e-30
ref|XP_002872489.1| predicted protein [Arabidopsis lyrata subsp....   137   3e-30

>ref|XP_002312051.1| predicted protein [Populus trichocarpa] gi|222851871|gb|EEE89418.1|
           predicted protein [Populus trichocarpa]
          Length = 261

 Score =  143 bits (360), Expect = 4e-32
 Identities = 86/152 (56%), Positives = 103/152 (67%), Gaps = 7/152 (4%)
 Frame = -2

Query: 440 RSLNLLDETLVHIPSS-----KGRVILIEDQVETSGAFVLHHLIKRSLSIES-SEIVIFV 279
           RSLNLLDE L     +     +G+V+LIED VETSG FVLH L+KR+LS +S +  VIF+
Sbjct: 4   RSLNLLDEALGLDYQTDPWPLRGKVVLIEDCVETSGCFVLHQLLKRTLSSQSPNNTVIFL 63

Query: 278 ALSKPFSHYDRILRKLGCNLVAQRENGKFIFIDMLKLECPDXXXXXXXXXGLIDLYRKIQ 99
           A S P SHYDRILRKLGCNLVAQRENG+F F DMLKL CPD         G   LY KIQ
Sbjct: 64  AFSHPLSHYDRILRKLGCNLVAQRENGRFFFFDMLKLLCPDEKEGKTGKGGFTALYWKIQ 123

Query: 98  KSVEVNASTSPELNR-CITVMMDDLSLLEVAA 6
            ++       PE N+   T+M+DD+SL+EVAA
Sbjct: 124 NTI----CALPENNKNHATIMIDDMSLMEVAA 151


>ref|XP_002281393.1| PREDICTED: UPF0405 protein C3orf75 homolog [Vitis vinifera]
           gi|297736457|emb|CBI25328.3| unnamed protein product
           [Vitis vinifera]
          Length = 256

 Score =  138 bits (348), Expect = 9e-31
 Identities = 80/147 (54%), Positives = 105/147 (71%), Gaps = 2/147 (1%)
 Frame = -2

Query: 440 RSLNLLDETLVHIPSSKGRVILIEDQVETSGAFVLHHLIKRSLSIESSEI--VIFVALSK 267
           RS  LLDE L  +  ++ RVI+IED VET+GAFVLHH++KRSL++ +S    VIF+A S+
Sbjct: 5   RSSTLLDEALA-LDWTQPRVIVIEDCVETNGAFVLHHVLKRSLALHTSSTSAVIFLAFSQ 63

Query: 266 PFSHYDRILRKLGCNLVAQRENGKFIFIDMLKLECPDXXXXXXXXXGLIDLYRKIQKSVE 87
           PFSHYDRILRKLGCNLV  ++N +F+F ++L LECPD         GL  LYR+IQK   
Sbjct: 64  PFSHYDRILRKLGCNLVTPKDNKRFVFFNLLTLECPD-GDEGKTSGGLPSLYREIQK--- 119

Query: 86  VNASTSPELNRCITVMMDDLSLLEVAA 6
           V  +   E  + IT+M+DD+SL+EVAA
Sbjct: 120 VIIALHEENRKSITIMIDDISLMEVAA 146


>ref|NP_567351.1| elongator protein 6 [Arabidopsis thaliana]
           gi|75154680|sp|Q8L9Y2.1|ELP6_ARATH RecName:
           Full=Elongator complex protein 6; Short=AtELP6; AltName:
           Full=Elongator component 6; AltName: Full=UPF0405
           protein ELP6 gi|21593728|gb|AAM65695.1| unknown
           [Arabidopsis thaliana] gi|87116610|gb|ABD19669.1|
           At4g10090 [Arabidopsis thaliana]
           gi|110735719|dbj|BAE99839.1| hypothetical protein
           [Arabidopsis thaliana] gi|332657437|gb|AEE82837.1|
           elongator protein 6 [Arabidopsis thaliana]
          Length = 262

 Score =  137 bits (346), Expect = 2e-30
 Identities = 78/152 (51%), Positives = 103/152 (67%), Gaps = 6/152 (3%)
 Frame = -2

Query: 446 MERSLNLLDETL-----VHIPSS-KGRVILIEDQVETSGAFVLHHLIKRSLSIESSEIVI 285
           M+RSLNLLD  L     + IPS   G+VILIED VETSG+FVLH L+KR LS  SS+ +I
Sbjct: 1   MDRSLNLLDLALGFDEQLAIPSPLNGKVILIEDCVETSGSFVLHQLMKRVLSSNSSDALI 60

Query: 284 FVALSKPFSHYDRILRKLGCNLVAQRENGKFIFIDMLKLECPDXXXXXXXXXGLIDLYRK 105
           F+A ++PFSHYDRILRKLGCNL   + N + +F DML ++C D          +  L+R+
Sbjct: 61  FLAFARPFSHYDRILRKLGCNLATHKSNNRLVFFDMLMVKCSDGDQMEDNVSAVAKLFRE 120

Query: 104 IQKSVEVNASTSPELNRCITVMMDDLSLLEVA 9
           IQ++V    S +   +  ITVM+DD+SLLE+A
Sbjct: 121 IQETVRKLQSVT---SGNITVMVDDMSLLEIA 149


>ref|XP_004163069.1| PREDICTED: elongator complex protein 6-like [Cucumis sativus]
          Length = 260

 Score =  137 bits (344), Expect = 3e-30
 Identities = 77/148 (52%), Positives = 100/148 (67%), Gaps = 6/148 (4%)
 Frame = -2

Query: 431 NLLDETLVHIPSSK-----GRVILIEDQVETSGAFVLHHLIKRSLSI-ESSEIVIFVALS 270
           NLLDE +     +      GR++L+ED VETSGAFVLHHL+KR+ S   SS +VIF+A S
Sbjct: 7   NLLDEAIGFDDPTNPTPLIGRLLLVEDCVETSGAFVLHHLLKRAFSSPHSSNVVIFLAFS 66

Query: 269 KPFSHYDRILRKLGCNLVAQRENGKFIFIDMLKLECPDXXXXXXXXXGLIDLYRKIQKSV 90
           + F HYDRILRKLGCNL AQR++G+F+F DML L C D          L+ LY KIQ++V
Sbjct: 67  QSFIHYDRILRKLGCNLAAQRDSGRFVFFDMLTLGCSDRSGKETGEGVLVGLYCKIQRAV 126

Query: 89  EVNASTSPELNRCITVMMDDLSLLEVAA 6
               +   E  + IT+++DD+SLLEVAA
Sbjct: 127 H---ALIQENKKHITIVIDDISLLEVAA 151


>ref|XP_002872489.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
           gi|297318326|gb|EFH48748.1| predicted protein
           [Arabidopsis lyrata subsp. lyrata]
          Length = 262

 Score =  137 bits (344), Expect = 3e-30
 Identities = 76/152 (50%), Positives = 101/152 (66%), Gaps = 6/152 (3%)
 Frame = -2

Query: 446 MERSLNLLD------ETLVHIPSSKGRVILIEDQVETSGAFVLHHLIKRSLSIESSEIVI 285
           M+RSLNLLD      E L +     G+VILIED VETSG+FVLH L+KR LS  SS+ +I
Sbjct: 1   MDRSLNLLDLALGFDEQLANPSPLNGKVILIEDCVETSGSFVLHQLMKRVLSPNSSDALI 60

Query: 284 FVALSKPFSHYDRILRKLGCNLVAQRENGKFIFIDMLKLECPDXXXXXXXXXGLIDLYRK 105
           F+A ++PFSHYDRILRKLGCNL   + N + +F DML ++C D          +  L+R+
Sbjct: 61  FLAFARPFSHYDRILRKLGCNLATHKTNNRLVFFDMLMIKCSDSEEMEDNVSAVAKLFRE 120

Query: 104 IQKSVEVNASTSPELNRCITVMMDDLSLLEVA 9
           IQ++V    S +   +  ITVM+DD+SLLE+A
Sbjct: 121 IQETVRKLQSVT---SGNITVMVDDMSLLEIA 149


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