BLASTX nr result

ID: Papaver22_contig00035120 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Papaver22_contig00035120
         (542 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI24510.3| unnamed protein product [Vitis vinifera]              329   2e-88
ref|XP_002268371.1| PREDICTED: cleavage and polyadenylation spec...   329   2e-88
ref|XP_002510905.1| cleavage and polyadenylation specificity fac...   315   3e-84
ref|XP_004169296.1| PREDICTED: cleavage and polyadenylation spec...   308   3e-82
ref|XP_004152876.1| PREDICTED: cleavage and polyadenylation spec...   308   3e-82

>emb|CBI24510.3| unnamed protein product [Vitis vinifera]
          Length = 1448

 Score =  329 bits (843), Expect = 2e-88
 Identities = 149/180 (82%), Positives = 173/180 (96%)
 Frame = +2

Query: 2    RLRIHPQLCDGSVVAFTVLHNVNCNHGLIYVTSQGFLKICQLPSILSYDNYWPVQKIPLR 181
            R+R+HPQLCDGS+VAFTVLHN+NCNHGLIYVTSQGFLKICQLP++ SYDNYWPVQKIPL+
Sbjct: 959  RIRVHPQLCDGSIVAFTVLHNINCNHGLIYVTSQGFLKICQLPAVSSYDNYWPVQKIPLK 1018

Query: 182  GTPHQVTYFSEKNLYPLIVSIPVVKPLNQVLSSLVDQDASHQIEHDNVGPDELQKTYTIE 361
            GTPHQVTYF+EKNLYPLIVS+PV+KPLN VLSSLVDQ+A HQ+E+DN+  DEL ++Y+++
Sbjct: 1019 GTPHQVTYFAEKNLYPLIVSVPVLKPLNHVLSSLVDQEAGHQLENDNLSSDELHRSYSVD 1078

Query: 362  EFEVRILEPEKSGGPWQTRATIPMQNSENALTVRMVTLFNTTTKENETLMAVGTAYVQGE 541
            EFEVR+LEPEKSG PWQTRATIPMQ+SENALTVR+VTLFNTTTKENETL+A+GTAYVQGE
Sbjct: 1079 EFEVRVLEPEKSGAPWQTRATIPMQSSENALTVRVVTLFNTTTKENETLLAIGTAYVQGE 1138


>ref|XP_002268371.1| PREDICTED: cleavage and polyadenylation specificity factor subunit
            1-like [Vitis vinifera]
          Length = 1442

 Score =  329 bits (843), Expect = 2e-88
 Identities = 149/180 (82%), Positives = 173/180 (96%)
 Frame = +2

Query: 2    RLRIHPQLCDGSVVAFTVLHNVNCNHGLIYVTSQGFLKICQLPSILSYDNYWPVQKIPLR 181
            R+R+HPQLCDGS+VAFTVLHN+NCNHGLIYVTSQGFLKICQLP++ SYDNYWPVQKIPL+
Sbjct: 953  RIRVHPQLCDGSIVAFTVLHNINCNHGLIYVTSQGFLKICQLPAVSSYDNYWPVQKIPLK 1012

Query: 182  GTPHQVTYFSEKNLYPLIVSIPVVKPLNQVLSSLVDQDASHQIEHDNVGPDELQKTYTIE 361
            GTPHQVTYF+EKNLYPLIVS+PV+KPLN VLSSLVDQ+A HQ+E+DN+  DEL ++Y+++
Sbjct: 1013 GTPHQVTYFAEKNLYPLIVSVPVLKPLNHVLSSLVDQEAGHQLENDNLSSDELHRSYSVD 1072

Query: 362  EFEVRILEPEKSGGPWQTRATIPMQNSENALTVRMVTLFNTTTKENETLMAVGTAYVQGE 541
            EFEVR+LEPEKSG PWQTRATIPMQ+SENALTVR+VTLFNTTTKENETL+A+GTAYVQGE
Sbjct: 1073 EFEVRVLEPEKSGAPWQTRATIPMQSSENALTVRVVTLFNTTTKENETLLAIGTAYVQGE 1132


>ref|XP_002510905.1| cleavage and polyadenylation specificity factor cpsf, putative
            [Ricinus communis] gi|223550020|gb|EEF51507.1| cleavage
            and polyadenylation specificity factor cpsf, putative
            [Ricinus communis]
          Length = 1461

 Score =  315 bits (807), Expect = 3e-84
 Identities = 148/180 (82%), Positives = 165/180 (91%)
 Frame = +2

Query: 2    RLRIHPQLCDGSVVAFTVLHNVNCNHGLIYVTSQGFLKICQLPSILSYDNYWPVQKIPLR 181
            RLR+HPQLCDGS+VAFTVLHNVNCNHGLIYVTSQG LKICQLPS  +YDNYWPVQKIPL+
Sbjct: 972  RLRVHPQLCDGSIVAFTVLHNVNCNHGLIYVTSQGNLKICQLPSFSNYDNYWPVQKIPLK 1031

Query: 182  GTPHQVTYFSEKNLYPLIVSIPVVKPLNQVLSSLVDQDASHQIEHDNVGPDELQKTYTIE 361
            GTPHQVTYF EKNLYPLIVS+PV KP+NQVLSSLVDQ+  HQIE+ N+  DEL +TY++E
Sbjct: 1032 GTPHQVTYFPEKNLYPLIVSVPVHKPVNQVLSSLVDQEVGHQIENHNLSSDELLQTYSVE 1091

Query: 362  EFEVRILEPEKSGGPWQTRATIPMQNSENALTVRMVTLFNTTTKENETLMAVGTAYVQGE 541
            EFEVRILE E  GGPWQT+ATIPMQ+SENALTVR+VTLFN TTKENETL+A+GTAYVQGE
Sbjct: 1092 EFEVRILESENGGGPWQTKATIPMQSSENALTVRVVTLFNATTKENETLLAIGTAYVQGE 1151


>ref|XP_004169296.1| PREDICTED: cleavage and polyadenylation specificity factor subunit
           1-like, partial [Cucumis sativus]
          Length = 741

 Score =  308 bits (789), Expect = 3e-82
 Identities = 144/180 (80%), Positives = 163/180 (90%)
 Frame = +2

Query: 2   RLRIHPQLCDGSVVAFTVLHNVNCNHGLIYVTSQGFLKICQLPSILSYDNYWPVQKIPLR 181
           RLR+HPQLCDG +VAF VLHNVNCNHGLIYVTSQG LKICQLPS  +YDNYWPVQK+PL+
Sbjct: 254 RLRVHPQLCDGPIVAFAVLHNVNCNHGLIYVTSQGVLKICQLPSTSNYDNYWPVQKVPLK 313

Query: 182 GTPHQVTYFSEKNLYPLIVSIPVVKPLNQVLSSLVDQDASHQIEHDNVGPDELQKTYTIE 361
           GTPHQVTYF EKNLYP+I+S PV KPLNQVLSS+VDQD  H +E+ N+  DELQ+TY++E
Sbjct: 314 GTPHQVTYFHEKNLYPVIISAPVQKPLNQVLSSMVDQDVGH-VENHNLSADELQQTYSVE 372

Query: 362 EFEVRILEPEKSGGPWQTRATIPMQNSENALTVRMVTLFNTTTKENETLMAVGTAYVQGE 541
           EFE+RILEPEKSGGPWQTRATI M +SENALT+R+VTL NTTTKENETL+AVGTAYVQGE
Sbjct: 373 EFEIRILEPEKSGGPWQTRATIAMHSSENALTIRVVTLLNTTTKENETLLAVGTAYVQGE 432


>ref|XP_004152876.1| PREDICTED: cleavage and polyadenylation specificity factor subunit
            1-like [Cucumis sativus]
          Length = 1504

 Score =  308 bits (789), Expect = 3e-82
 Identities = 144/180 (80%), Positives = 163/180 (90%)
 Frame = +2

Query: 2    RLRIHPQLCDGSVVAFTVLHNVNCNHGLIYVTSQGFLKICQLPSILSYDNYWPVQKIPLR 181
            RLR+HPQLCDG +VAF VLHNVNCNHGLIYVTSQG LKICQLPS  +YDNYWPVQK+PL+
Sbjct: 1017 RLRVHPQLCDGPIVAFAVLHNVNCNHGLIYVTSQGVLKICQLPSTSNYDNYWPVQKVPLK 1076

Query: 182  GTPHQVTYFSEKNLYPLIVSIPVVKPLNQVLSSLVDQDASHQIEHDNVGPDELQKTYTIE 361
            GTPHQVTYF EKNLYP+I+S PV KPLNQVLSS+VDQD  H +E+ N+  DELQ+TY++E
Sbjct: 1077 GTPHQVTYFHEKNLYPVIISAPVQKPLNQVLSSMVDQDVGH-VENHNLSADELQQTYSVE 1135

Query: 362  EFEVRILEPEKSGGPWQTRATIPMQNSENALTVRMVTLFNTTTKENETLMAVGTAYVQGE 541
            EFE+RILEPEKSGGPWQTRATI M +SENALT+R+VTL NTTTKENETL+AVGTAYVQGE
Sbjct: 1136 EFEIRILEPEKSGGPWQTRATIAMHSSENALTIRVVTLLNTTTKENETLLAVGTAYVQGE 1195


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