BLASTX nr result
ID: Papaver22_contig00035036
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Papaver22_contig00035036
(657 letters)
Database: ./nr
23,641,837 sequences; 8,123,359,852 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_004140941.1| PREDICTED: pentatricopeptide repeat-containi... 56 7e-19
ref|XP_004159440.1| PREDICTED: LOW QUALITY PROTEIN: pentatricope... 56 4e-18
ref|XP_002265412.1| PREDICTED: pentatricopeptide repeat-containi... 72 1e-15
ref|NP_174678.2| pentatricopeptide repeat-containing protein [Ar... 69 1e-14
ref|XP_002269269.1| PREDICTED: pentatricopeptide repeat-containi... 49 1e-14
>ref|XP_004140941.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g34160-like [Cucumis sativus]
Length = 576
Score = 56.2 bits (134), Expect(3) = 7e-19
Identities = 30/56 (53%), Positives = 37/56 (66%), Gaps = 1/56 (1%)
Frame = -3
Query: 400 HPYWRDNYKKLHEISLEINC-GYVAGTNLVLYDIGEEEKENLLLYHSDNFVVACGL 236
H R+ Y KL EI+L I GY A T+ VL+DIG+E+KEN L YHS+ VA GL
Sbjct: 463 HSSCREIYAKLDEINLRIKAYGYSADTSNVLHDIGDEDKENALCYHSEKLAVAFGL 518
Score = 46.6 bits (109), Expect(3) = 7e-19
Identities = 24/44 (54%), Positives = 30/44 (68%), Gaps = 1/44 (2%)
Frame = -2
Query: 620 LVELGSNSWDDSVLLSNTYAAHERWDAVGKVREA-EEKSCKENP 492
LVE+G S D VLLSN YAA +RWD VG+VR+A + K+ P
Sbjct: 399 LVEMGFISCGDFVLLSNVYAARQRWDDVGRVRDAMRRRDVKKTP 442
Score = 36.6 bits (83), Expect(3) = 7e-19
Identities = 15/28 (53%), Positives = 20/28 (71%)
Frame = -2
Query: 203 DCHAGVRIIS*IYKREVIVIDGARYHHF 120
DCH +++IS IY RE+IV D R+H F
Sbjct: 538 DCHVVIKLISKIYIREIIVRDRTRFHRF 565
>ref|XP_004159440.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
protein At1g34160-like [Cucumis sativus]
Length = 576
Score = 56.2 bits (134), Expect(3) = 4e-18
Identities = 30/56 (53%), Positives = 37/56 (66%), Gaps = 1/56 (1%)
Frame = -3
Query: 400 HPYWRDNYKKLHEISLEINC-GYVAGTNLVLYDIGEEEKENLLLYHSDNFVVACGL 236
H R+ Y KL EI+L I GY A T+ VL+DIG+E+KEN L YHS+ VA GL
Sbjct: 463 HSSCREIYAKLDEINLRIKAYGYSADTSNVLHDIGDEDKENALCYHSEKLAVAFGL 518
Score = 43.9 bits (102), Expect(3) = 4e-18
Identities = 23/44 (52%), Positives = 29/44 (65%), Gaps = 1/44 (2%)
Frame = -2
Query: 620 LVELGSNSWDDSVLLSNTYAAHERWDAVGKVREA-EEKSCKENP 492
LVE+G S VLLSN YAA +RWD VG+VR+A + K+ P
Sbjct: 399 LVEMGFISCGXFVLLSNVYAARQRWDDVGRVRDAMRRRDVKKTP 442
Score = 36.6 bits (83), Expect(3) = 4e-18
Identities = 15/28 (53%), Positives = 20/28 (71%)
Frame = -2
Query: 203 DCHAGVRIIS*IYKREVIVIDGARYHHF 120
DCH +++IS IY RE+IV D R+H F
Sbjct: 538 DCHVVIKLISKIYIREIIVRDRTRFHRF 565
>ref|XP_002265412.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g34160-like [Vitis vinifera]
Length = 573
Score = 71.6 bits (174), Expect(2) = 1e-15
Identities = 38/73 (52%), Positives = 48/73 (65%), Gaps = 1/73 (1%)
Frame = -3
Query: 442 IVHKYC*RFNT*SGHPYWRDNYKKLHEISLEINC-GYVAGTNLVLYDIGEEEKENLLLYH 266
++HK+ N HP WR+ Y KL EI I GYVA T+LVL+DIGEE+KEN L +H
Sbjct: 449 VIHKFV---NGDQSHPDWREIYAKLDEIRFRIKAFGYVAETSLVLHDIGEEDKENALCHH 505
Query: 265 SDNFVVACGLISS 227
S+ VA GLIS+
Sbjct: 506 SEKLAVAFGLIST 518
Score = 37.4 bits (85), Expect(2) = 1e-15
Identities = 15/28 (53%), Positives = 21/28 (75%)
Frame = -2
Query: 203 DCHAGVRIIS*IYKREVIVIDGARYHHF 120
DCH +++IS IY +E+IV D AR+H F
Sbjct: 535 DCHVVIKLISKIYDQEIIVRDRARFHRF 562
Score = 58.9 bits (141), Expect = 8e-07
Identities = 34/84 (40%), Positives = 48/84 (57%), Gaps = 12/84 (14%)
Frame = -2
Query: 653 NLQRS*IGYPSLVELGSNSWDDSVLLSNTYAAHERWDAVGKVREA-EEKSCKENPN*RF- 480
N++ + + LVE+GSNS D VLLSN YAA ERW+ VG+VREA + + ++ P +
Sbjct: 385 NVEMAEMASRKLVEMGSNSCGDFVLLSNVYAARERWEDVGRVREAMKSRDVRKVPGFSYI 444
Query: 479 ----------NT*SDHPYWRDIYS 438
N HP WR+IY+
Sbjct: 445 EVEGVIHKFVNGDQSHPDWREIYA 468
>ref|NP_174678.2| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|193806500|sp|Q9FX24.2|PPR71_ARATH RecName:
Full=Pentatricopeptide repeat-containing protein
At1g34160 gi|332193557|gb|AEE31678.1| pentatricopeptide
repeat-containing protein [Arabidopsis thaliana]
Length = 581
Score = 69.3 bits (168), Expect(2) = 1e-14
Identities = 36/74 (48%), Positives = 48/74 (64%), Gaps = 1/74 (1%)
Frame = -3
Query: 439 VHKYC*RFNT*SGHPYWRDNYKKLHEISLEIN-CGYVAGTNLVLYDIGEEEKENLLLYHS 263
+H++ +N+ H WR+ Y+K+ EI +I GYVA T LVL+DIGEEEKEN L YHS
Sbjct: 455 IHEF---YNSDKSHEQWREIYEKIDEIRFKIREDGYVAQTGLVLHDIGEEEKENALCYHS 511
Query: 262 DNFVVACGLISSGG 221
+ VA GL+ G
Sbjct: 512 EKLAVAYGLMMMDG 525
Score = 36.2 bits (82), Expect(2) = 1e-14
Identities = 16/28 (57%), Positives = 19/28 (67%)
Frame = -2
Query: 203 DCHAGVRIIS*IYKREVIVIDGARYHHF 120
DCH + IS IYKRE+IV D R+H F
Sbjct: 543 DCHVVFKHISKIYKREIIVRDRVRFHRF 570
>ref|XP_002269269.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g66520-like [Vitis vinifera]
Length = 640
Score = 48.5 bits (114), Expect(3) = 1e-14
Identities = 27/61 (44%), Positives = 34/61 (55%), Gaps = 1/61 (1%)
Frame = -3
Query: 406 SGHPYWRDNYKKLHEISLEINC-GYVAGTNLVLYDIGEEEKENLLLYHSDNFVVACGLIS 230
S HP Y KL E+S E+ GY T VL D+ EEEKE L +HS+ +A GLI
Sbjct: 525 SSHPQLEMIYAKLGEMSQELKAAGYKPDTGQVLLDMDEEEKETALCHHSEKLAIAFGLIK 584
Query: 229 S 227
+
Sbjct: 585 T 585
Score = 42.7 bits (99), Expect(3) = 1e-14
Identities = 17/29 (58%), Positives = 22/29 (75%)
Frame = -2
Query: 206 ADCHAGVRIIS*IYKREVIVIDGARYHHF 120
ADCH+ ++IS IY RE+IV D R+HHF
Sbjct: 601 ADCHSATKLISKIYNREIIVRDRCRFHHF 629
Score = 33.5 bits (75), Expect(3) = 1e-14
Identities = 20/48 (41%), Positives = 25/48 (52%), Gaps = 1/48 (2%)
Frame = -2
Query: 620 LVELGSNSWDDSVLLSNTYAAHERWDAVGKVRE-AEEKSCKENPN*RF 480
L+EL N VLLSN YAA RWD V ++R E+ + P F
Sbjct: 463 LLELDPNHGGRYVLLSNIYAACGRWDRVAELRRMMRERQVSKTPGCSF 510