BLASTX nr result

ID: Papaver22_contig00034027 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Papaver22_contig00034027
         (534 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AAN77868.1| putative heterogeneous nuclear ribonucleoprotein ...    65   5e-09
ref|XP_002270340.2| PREDICTED: uncharacterized protein LOC100232...    64   1e-08
ref|XP_002526479.1| RNA binding protein, putative [Ricinus commu...    64   2e-08
ref|XP_003636168.1| Heterogeneous nuclear ribonucleoprotein Q [M...    63   2e-08
ref|XP_002302501.1| predicted protein [Populus trichocarpa] gi|2...    63   2e-08

>gb|AAN77868.1| putative heterogeneous nuclear ribonucleoprotein [Vitis vinifera]
          Length = 342

 Score = 65.5 bits (158), Expect = 5e-09
 Identities = 33/53 (62%), Positives = 40/53 (75%)
 Frame = -3

Query: 205 KRK*LVVFFGVLDKGATDEDVKEVFREVGEVS*VWLIMNSQTKKNKGFCFFTF 47
           KRK   VF G LDK AT++D+K+VF +VGEV+ V L+MN QTKKNKGF F  F
Sbjct: 27  KRKEFEVFVGGLDKDATEDDLKKVFSQVGEVTEVRLMMNPQTKKNKGFAFLRF 79


>ref|XP_002270340.2| PREDICTED: uncharacterized protein LOC100232913 [Vitis vinifera]
           gi|297734640|emb|CBI16691.3| unnamed protein product
           [Vitis vinifera]
          Length = 812

 Score = 64.3 bits (155), Expect = 1e-08
 Identities = 32/53 (60%), Positives = 40/53 (75%)
 Frame = -3

Query: 205 KRK*LVVFFGVLDKGATDEDVKEVFREVGEVS*VWLIMNSQTKKNKGFCFFTF 47
           KRK   VF G LDK AT++D+++VF +VGEV+ V L+MN QTKKNKGF F  F
Sbjct: 228 KRKEFEVFVGGLDKDATEDDLRKVFSQVGEVTEVRLMMNPQTKKNKGFAFLRF 280


>ref|XP_002526479.1| RNA binding protein, putative [Ricinus communis]
           gi|223534154|gb|EEF35870.1| RNA binding protein,
           putative [Ricinus communis]
          Length = 784

 Score = 63.5 bits (153), Expect = 2e-08
 Identities = 32/53 (60%), Positives = 39/53 (73%)
 Frame = -3

Query: 205 KRK*LVVFFGVLDKGATDEDVKEVFREVGEVS*VWLIMNSQTKKNKGFCFFTF 47
           KRK   VF G LDK AT++D+++VF  VGEV+ V L+MN QTKKNKGF F  F
Sbjct: 209 KRKEFEVFVGGLDKDATEDDLRKVFTRVGEVTEVRLMMNPQTKKNKGFAFLRF 261


>ref|XP_003636168.1| Heterogeneous nuclear ribonucleoprotein Q [Medicago truncatula]
           gi|355502103|gb|AES83306.1| Heterogeneous nuclear
           ribonucleoprotein Q [Medicago truncatula]
          Length = 824

 Score = 63.2 bits (152), Expect = 2e-08
 Identities = 33/60 (55%), Positives = 41/60 (68%)
 Frame = -3

Query: 205 KRK*LVVFFGVLDKGATDEDVKEVFREVGEVS*VWLIMNSQTKKNKGFCFFTFGHCRTRK 26
           KRK   VF G LDK AT++D+++VF EVG V+ V L+MN QTKKNKGF F  F +    K
Sbjct: 211 KRKEFEVFVGGLDKDATEDDLRKVFSEVGVVTEVRLMMNPQTKKNKGFAFLRFENVEQAK 270


>ref|XP_002302501.1| predicted protein [Populus trichocarpa] gi|222844227|gb|EEE81774.1|
           predicted protein [Populus trichocarpa]
          Length = 341

 Score = 63.2 bits (152), Expect = 2e-08
 Identities = 31/53 (58%), Positives = 39/53 (73%)
 Frame = -3

Query: 205 KRK*LVVFFGVLDKGATDEDVKEVFREVGEVS*VWLIMNSQTKKNKGFCFFTF 47
           KRK   VF G LDK AT++D++++F  VGEV+ V L+MN QTKKNKGF F  F
Sbjct: 28  KRKEFEVFVGGLDKDATEDDLRKIFSRVGEVTEVRLMMNPQTKKNKGFAFLRF 80


Top