BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Papaver22_contig00033926
         (914 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002265253.1| PREDICTED: pentatricopeptide repeat-containi...   436   e-120
emb|CAN73397.1| hypothetical protein VITISV_016435 [Vitis vinifera]   436   e-120
emb|CBI24272.3| unnamed protein product [Vitis vinifera]              231   2e-58
ref|XP_004137054.1| PREDICTED: pentatricopeptide repeat-containi...   195   1e-47
ref|XP_002528032.1| pentatricopeptide repeat-containing protein,...   192   9e-47

>ref|XP_002265253.1| PREDICTED: pentatricopeptide repeat-containing protein At3g57430,
            chloroplastic-like [Vitis vinifera]
          Length = 972

 Score =  436 bits (1122), Expect = e-120
 Identities = 217/304 (71%), Positives = 245/304 (80%)
 Frame = +2

Query: 2    RKMVIEKVKPNSITIASVVSACTNLSLLRHGKEIRGYCIKAERLDLDVLVGNSFVDFYAK 181
            RKMV+E VKPNSITIAS VSACTNLSLLRHG+EI GYCIK E LD D+LVGNS VD+YAK
Sbjct: 351  RKMVLEGVKPNSITIASAVSACTNLSLLRHGREIHGYCIKVEELDSDLLVGNSLVDYYAK 410

Query: 182  CRNPEVARRNFDLIKQKDLVSWNAMLAGYALRGCREEALELLDAMKVQGVKPDIITWNGL 361
            CR+ EVARR F +IKQ DLVSWNAMLAGYALRG  EEA+ELL  MK QG++PDIITWNGL
Sbjct: 411  CRSVEVARRKFGMIKQTDLVSWNAMLAGYALRGSHEEAIELLSEMKFQGIEPDIITWNGL 470

Query: 362  ITGYTQSRDGKTALEFFSKMRQTDVYPNTITISGALAACALTDNLKLGKEIHGFVIRNQM 541
            +TG+TQ  DGK ALEFF +M    + PNT TISGALAAC    NLKLGKEIHG+V+RN +
Sbjct: 471  VTGFTQYGDGKAALEFFQRMHSMGMDPNTTTISGALAACGQVRNLKLGKEIHGYVLRNHI 530

Query: 542  ELSTGVGSALISMYSSCGQLRLGLSVFRELSTRDVVIWNSIVAACAQGGQGTNALNLLTD 721
            ELSTGVGSALISMYS C  L +  SVF ELSTRDVV+WNSI++ACAQ G+  NAL+LL +
Sbjct: 531  ELSTGVGSALISMYSGCDSLEVACSVFSELSTRDVVVWNSIISACAQSGRSVNALDLLRE 590

Query: 722  MKLSNVEPNTVTMVSXXXXXXXXXXXXQGKEIHQYILRHGLETCNFIWNSLIDMYGRCGE 901
            M LSNVE NTVTMVS            QGKEIHQ+I+R GL+TCNFI NSLIDMYGRCG 
Sbjct: 591  MNLSNVEVNTVTMVSALPACSKLAALRQGKEIHQFIIRCGLDTCNFILNSLIDMYGRCGS 650

Query: 902  IRKA 913
            I+K+
Sbjct: 651  IQKS 654



 Score =  164 bits (414), Expect = 3e-38
 Identities = 109/374 (29%), Positives = 170/374 (45%), Gaps = 72/374 (19%)
 Frame = +2

Query: 8    MVIEKVKPNSITIASVVSACTNLSLLRHGKEIRGYCIKAERLDLDVLVGNSFVDFYAKCR 187
            MV E V+P+      V  AC+ L   R GK++  Y +     + +  V  S +D + KC 
Sbjct: 181  MVNEGVRPDHFVFPKVFKACSELKNYRVGKDVYDYMLSIG-FEGNSCVKGSILDMFIKCG 239

Query: 188  NPEVARRNFDLIKQKDLVSWNAMLAGYALRGCREEALELLDAMKVQGVKPDIITWNGLIT 367
              ++ARR F+ I+ KD+  WN M++GY  +G  ++AL+ +  MK+ GVKPD +TWN +I+
Sbjct: 240  RMDIARRFFEEIEFKDVFMWNIMVSGYTSKGEFKKALKCISDMKLSGVKPDQVTWNAIIS 299

Query: 368  GYTQS----------------RDGK--------------------TALEFFSKMRQTDVY 439
            GY QS                +D K                     AL  F KM    V 
Sbjct: 300  GYAQSGQFEEASKYFLEMGGLKDFKPNVVSWTALIAGSEQNGYDFEALSVFRKMVLEGVK 359

Query: 440  PNTITISGALAACALTDNLKLGKEIHGFVIR-NQMELSTGVGSALISMYSSCGQLRLGLS 616
            PN+ITI+ A++AC     L+ G+EIHG+ I+  +++    VG++L+  Y+ C  + +   
Sbjct: 360  PNSITIASAVSACTNLSLLRHGREIHGYCIKVEELDSDLLVGNSLVDYYAKCRSVEVARR 419

Query: 617  VFRELSTRDVVIWNSIVAACAQGGQGTNALNLLTDMKLSNVE------------------ 742
             F  +   D+V WN+++A  A  G    A+ LL++MK   +E                  
Sbjct: 420  KFGMIKQTDLVSWNAMLAGYALRGSHEEAIELLSEMKFQGIEPDIITWNGLVTGFTQYGD 479

Query: 743  -----------------PNTVTMVSXXXXXXXXXXXXQGKEIHQYILRHGLETCNFIWNS 871
                             PNT T+               GKEIH Y+LR+ +E    + ++
Sbjct: 480  GKAALEFFQRMHSMGMDPNTTTISGALAACGQVRNLKLGKEIHGYVLRNHIELSTGVGSA 539

Query: 872  LIDMYGRCGEIRKA 913
            LI MY  C  +  A
Sbjct: 540  LISMYSGCDSLEVA 553



 Score =  118 bits (296), Expect = 2e-24
 Identities = 73/295 (24%), Positives = 133/295 (45%), Gaps = 1/295 (0%)
 Frame = +2

Query: 29   PNSITIASVVSACTNLSLLRHGKEIRGYCIKAERLDLDVLVGNSFVDFYAKCRNPEVARR 208
            PN+ TI+  ++AC  +  L+ GKEI GY ++   ++L   VG++ +  Y+ C + EVA  
Sbjct: 497  PNTTTISGALAACGQVRNLKLGKEIHGYVLR-NHIELSTGVGSALISMYSGCDSLEVACS 555

Query: 209  NFDLIKQKDLVSWNAMLAGYALRGCREEALELLDAMKVQGVKPDIITWNGLITGYTQSRD 388
             F  +  +D                                   ++ WN +I+   QS  
Sbjct: 556  VFSELSTRD-----------------------------------VVVWNSIISACAQSGR 580

Query: 389  GKTALEFFSKMRQTDVYPNTITISGALAACALTDNLKLGKEIHGFVIRNQMELSTGVGSA 568
               AL+   +M  ++V  NT+T+  AL AC+    L+ GKEIH F+IR  ++    + ++
Sbjct: 581  SVNALDLLREMNLSNVEVNTVTMVSALPACSKLAALRQGKEIHQFIIRCGLDTCNFILNS 640

Query: 569  LISMYSSCGQLRLGLSVFRELSTRDVVIWNSIVAACAQGGQGTNALNLLTDMKLSNVEPN 748
            LI MY  CG ++    +F  +  RD+V WN +++     G G +A+NL    +   ++PN
Sbjct: 641  LIDMYGRCGSIQKSRRIFDLMPQRDLVSWNVMISVYGMHGFGMDAVNLFQQFRTMGLKPN 700

Query: 749  TVTMVSXXXXXXXXXXXXQG-KEIHQYILRHGLETCNFIWNSLIDMYGRCGEIRK 910
             +T  +            +G K        + ++     +  ++D+  R G+  +
Sbjct: 701  HITFTNLLSACSHSGLIEEGWKYFKMMKTEYAMDPAVEQYACMVDLLSRAGQFNE 755



 Score = 97.1 bits (240), Expect = 5e-18
 Identities = 49/141 (34%), Positives = 84/141 (59%)
 Frame = +2

Query: 2    RKMVIEKVKPNSITIASVVSACTNLSLLRHGKEIRGYCIKAERLDLDVLVGNSFVDFYAK 181
            R+M +  V+ N++T+ S + AC+ L+ LR GKEI  + I+   LD    + NS +D Y +
Sbjct: 589  REMNLSNVEVNTVTMVSALPACSKLAALRQGKEIHQFIIRCG-LDTCNFILNSLIDMYGR 647

Query: 182  CRNPEVARRNFDLIKQKDLVSWNAMLAGYALRGCREEALELLDAMKVQGVKPDIITWNGL 361
            C + + +RR FDL+ Q+DLVSWN M++ Y + G   +A+ L    +  G+KP+ IT+  L
Sbjct: 648  CGSIQKSRRIFDLMPQRDLVSWNVMISVYGMHGFGMDAVNLFQQFRTMGLKPNHITFTNL 707

Query: 362  ITGYTQSRDGKTALEFFSKMR 424
            ++  + S   +   ++F  M+
Sbjct: 708  LSACSHSGLIEEGWKYFKMMK 728



 Score = 94.7 bits (234), Expect = 3e-17
 Identities = 60/237 (25%), Positives = 112/237 (47%)
 Frame = +2

Query: 47  ASVVSACTNLSLLRHGKEIRGYCIKAERLDLDVLVGNSFVDFYAKCRNPEVARRNFDLIK 226
           AS++  C  L  LR G ++    +    +D+   +G+  ++ Y +    E ARR FD + 
Sbjct: 93  ASILQKCRKLYNLRLGFQVHAQLV-VNGVDVCEFLGSRLLEVYCQTGCVEDARRMFDKMS 151

Query: 227 QKDLVSWNAMLAGYALRGCREEALELLDAMKVQGVKPDIITWNGLITGYTQSRDGKTALE 406
           ++++ SW A++  Y   G  EE ++L   M  +GV+PD                      
Sbjct: 152 ERNVFSWTAIMEMYCGLGDYEETIKLFYLMVNEGVRPDHF-------------------- 191

Query: 407 FFSKMRQTDVYPNTITISGALAACALTDNLKLGKEIHGFVIRNQMELSTGVGSALISMYS 586
                    V+P          AC+   N ++GK+++ +++    E ++ V  +++ M+ 
Sbjct: 192 ---------VFPK------VFKACSELKNYRVGKDVYDYMLSIGFEGNSCVKGSILDMFI 236

Query: 587 SCGQLRLGLSVFRELSTRDVVIWNSIVAACAQGGQGTNALNLLTDMKLSNVEPNTVT 757
            CG++ +    F E+  +DV +WN +V+     G+   AL  ++DMKLS V+P+ VT
Sbjct: 237 KCGRMDIARRFFEEIEFKDVFMWNIMVSGYTSKGEFKKALKCISDMKLSGVKPDQVT 293



 Score = 59.7 bits (143), Expect = 9e-07
 Identities = 35/146 (23%), Positives = 66/146 (45%)
 Frame = +2

Query: 467 LAACALTDNLKLGKEIHGFVIRNQMELSTGVGSALISMYSSCGQLRLGLSVFRELSTRDV 646
           L  C    NL+LG ++H  ++ N +++   +GS L+ +Y   G +     +F ++S R+V
Sbjct: 96  LQKCRKLYNLRLGFQVHAQLVVNGVDVCEFLGSRLLEVYCQTGCVEDARRMFDKMSERNV 155

Query: 647 VIWNSIVAACAQGGQGTNALNLLTDMKLSNVEPNTVTMVSXXXXXXXXXXXXQGKEIHQY 826
             W +I+      G     + L   M    V P+                   GK+++ Y
Sbjct: 156 FSWTAIMEMYCGLGDYEETIKLFYLMVNEGVRPDHFVFPKVFKACSELKNYRVGKDVYDY 215

Query: 827 ILRHGLETCNFIWNSLIDMYGRCGEI 904
           +L  G E  + +  S++DM+ +CG +
Sbjct: 216 MLSIGFEGNSCVKGSILDMFIKCGRM 241


>emb|CAN73397.1| hypothetical protein VITISV_016435 [Vitis vinifera]
          Length = 929

 Score =  436 bits (1122), Expect = e-120
 Identities = 217/304 (71%), Positives = 245/304 (80%)
 Frame = +2

Query: 2    RKMVIEKVKPNSITIASVVSACTNLSLLRHGKEIRGYCIKAERLDLDVLVGNSFVDFYAK 181
            RKMV+E VKPNSITIAS VSACTNLSLLRHG+EI GYCIK E LD D+LVGNS VD+YAK
Sbjct: 351  RKMVLEGVKPNSITIASAVSACTNLSLLRHGREIHGYCIKVEELDSDLLVGNSLVDYYAK 410

Query: 182  CRNPEVARRNFDLIKQKDLVSWNAMLAGYALRGCREEALELLDAMKVQGVKPDIITWNGL 361
            CR+ EVARR F +IKQ DLVSWNAMLAGYALRG  EEA+ELL  MK QG++PDIITWNGL
Sbjct: 411  CRSVEVARRKFGMIKQTDLVSWNAMLAGYALRGSHEEAIELLSEMKFQGIEPDIITWNGL 470

Query: 362  ITGYTQSRDGKTALEFFSKMRQTDVYPNTITISGALAACALTDNLKLGKEIHGFVIRNQM 541
            +TG+TQ  DGK ALEFF +M    + PNT TISGALAAC    NLKLGKEIHG+V+RN +
Sbjct: 471  VTGFTQYGDGKAALEFFQRMHSMGMDPNTTTISGALAACGQVRNLKLGKEIHGYVLRNHI 530

Query: 542  ELSTGVGSALISMYSSCGQLRLGLSVFRELSTRDVVIWNSIVAACAQGGQGTNALNLLTD 721
            ELSTGVGSALISMYS C  L +  SVF ELSTRDVV+WNSI++ACAQ G+  NAL+LL +
Sbjct: 531  ELSTGVGSALISMYSGCDSLEVACSVFSELSTRDVVVWNSIISACAQSGRSVNALDLLRE 590

Query: 722  MKLSNVEPNTVTMVSXXXXXXXXXXXXQGKEIHQYILRHGLETCNFIWNSLIDMYGRCGE 901
            M LSNVE NTVTMVS            QGKEIHQ+I+R GL+TCNFI NSLIDMYGRCG 
Sbjct: 591  MNLSNVEVNTVTMVSALPACSKLAALRQGKEIHQFIIRCGLDTCNFILNSLIDMYGRCGS 650

Query: 902  IRKA 913
            I+K+
Sbjct: 651  IQKS 654



 Score =  164 bits (414), Expect = 3e-38
 Identities = 109/374 (29%), Positives = 170/374 (45%), Gaps = 72/374 (19%)
 Frame = +2

Query: 8    MVIEKVKPNSITIASVVSACTNLSLLRHGKEIRGYCIKAERLDLDVLVGNSFVDFYAKCR 187
            MV E V+P+      V  AC+ L   R GK++  Y +     + +  V  S +D + KC 
Sbjct: 181  MVNEGVRPDHFVFPKVFKACSELKNYRVGKDVYDYMLSIG-FEGNSCVKGSILDMFIKCG 239

Query: 188  NPEVARRNFDLIKQKDLVSWNAMLAGYALRGCREEALELLDAMKVQGVKPDIITWNGLIT 367
              ++ARR F+ I+ KD+  WN M++GY  +G  ++AL+ +  MK+ GVKPD +TWN +I+
Sbjct: 240  RMDIARRFFEEIEFKDVFMWNIMVSGYTSKGEFKKALKCISDMKLSGVKPDQVTWNAIIS 299

Query: 368  GYTQS----------------RDGK--------------------TALEFFSKMRQTDVY 439
            GY QS                +D K                     AL  F KM    V 
Sbjct: 300  GYAQSGQFEEASKYFLEMGGLKDFKPNVVSWTALIAGSEQNGYDFEALSVFRKMVLEGVK 359

Query: 440  PNTITISGALAACALTDNLKLGKEIHGFVIR-NQMELSTGVGSALISMYSSCGQLRLGLS 616
            PN+ITI+ A++AC     L+ G+EIHG+ I+  +++    VG++L+  Y+ C  + +   
Sbjct: 360  PNSITIASAVSACTNLSLLRHGREIHGYCIKVEELDSDLLVGNSLVDYYAKCRSVEVARR 419

Query: 617  VFRELSTRDVVIWNSIVAACAQGGQGTNALNLLTDMKLSNVE------------------ 742
             F  +   D+V WN+++A  A  G    A+ LL++MK   +E                  
Sbjct: 420  KFGMIKQTDLVSWNAMLAGYALRGSHEEAIELLSEMKFQGIEPDIITWNGLVTGFTQYGD 479

Query: 743  -----------------PNTVTMVSXXXXXXXXXXXXQGKEIHQYILRHGLETCNFIWNS 871
                             PNT T+               GKEIH Y+LR+ +E    + ++
Sbjct: 480  GKAALEFFQRMHSMGMDPNTTTISGALAACGQVRNLKLGKEIHGYVLRNHIELSTGVGSA 539

Query: 872  LIDMYGRCGEIRKA 913
            LI MY  C  +  A
Sbjct: 540  LISMYSGCDSLEVA 553



 Score =  118 bits (295), Expect = 2e-24
 Identities = 73/295 (24%), Positives = 133/295 (45%), Gaps = 1/295 (0%)
 Frame = +2

Query: 29   PNSITIASVVSACTNLSLLRHGKEIRGYCIKAERLDLDVLVGNSFVDFYAKCRNPEVARR 208
            PN+ TI+  ++AC  +  L+ GKEI GY ++   ++L   VG++ +  Y+ C + EVA  
Sbjct: 497  PNTTTISGALAACGQVRNLKLGKEIHGYVLR-NHIELSTGVGSALISMYSGCDSLEVACS 555

Query: 209  NFDLIKQKDLVSWNAMLAGYALRGCREEALELLDAMKVQGVKPDIITWNGLITGYTQSRD 388
             F  +  +D                                   ++ WN +I+   QS  
Sbjct: 556  VFSELSTRD-----------------------------------VVVWNSIISACAQSGR 580

Query: 389  GKTALEFFSKMRQTDVYPNTITISGALAACALTDNLKLGKEIHGFVIRNQMELSTGVGSA 568
               AL+   +M  ++V  NT+T+  AL AC+    L+ GKEIH F+IR  ++    + ++
Sbjct: 581  SVNALDLLREMNLSNVEVNTVTMVSALPACSKLAALRQGKEIHQFIIRCGLDTCNFILNS 640

Query: 569  LISMYSSCGQLRLGLSVFRELSTRDVVIWNSIVAACAQGGQGTNALNLLTDMKLSNVEPN 748
            LI MY  CG ++    +F  +  RD+V WN +++     G G +A+NL    +   ++PN
Sbjct: 641  LIDMYGRCGSIQKSRRIFDLMPQRDLVSWNVMISVYGMHGFGMDAVNLFQXFRTMGLKPN 700

Query: 749  TVTMVSXXXXXXXXXXXXQG-KEIHQYILRHGLETCNFIWNSLIDMYGRCGEIRK 910
             +T  +            +G K        + ++     +  ++D+  R G+  +
Sbjct: 701  HITFTNLLSACSHSGLIEEGWKYFKMMKTEYAMDPAVEQYACMVDLLSRAGQFNE 755



 Score = 97.1 bits (240), Expect = 5e-18
 Identities = 49/141 (34%), Positives = 84/141 (59%)
 Frame = +2

Query: 2    RKMVIEKVKPNSITIASVVSACTNLSLLRHGKEIRGYCIKAERLDLDVLVGNSFVDFYAK 181
            R+M +  V+ N++T+ S + AC+ L+ LR GKEI  + I+   LD    + NS +D Y +
Sbjct: 589  REMNLSNVEVNTVTMVSALPACSKLAALRQGKEIHQFIIRCG-LDTCNFILNSLIDMYGR 647

Query: 182  CRNPEVARRNFDLIKQKDLVSWNAMLAGYALRGCREEALELLDAMKVQGVKPDIITWNGL 361
            C + + +RR FDL+ Q+DLVSWN M++ Y + G   +A+ L    +  G+KP+ IT+  L
Sbjct: 648  CGSIQKSRRIFDLMPQRDLVSWNVMISVYGMHGFGMDAVNLFQXFRTMGLKPNHITFTNL 707

Query: 362  ITGYTQSRDGKTALEFFSKMR 424
            ++  + S   +   ++F  M+
Sbjct: 708  LSACSHSGLIEEGWKYFKMMK 728



 Score = 94.7 bits (234), Expect = 3e-17
 Identities = 60/237 (25%), Positives = 112/237 (47%)
 Frame = +2

Query: 47  ASVVSACTNLSLLRHGKEIRGYCIKAERLDLDVLVGNSFVDFYAKCRNPEVARRNFDLIK 226
           AS++  C  L  LR G ++    +    +D+   +G+  ++ Y +    E ARR FD + 
Sbjct: 93  ASILQKCRKLYNLRLGFQVHAQLV-VNGVDVCEFLGSRLLEVYCQTGCVEDARRMFDKMS 151

Query: 227 QKDLVSWNAMLAGYALRGCREEALELLDAMKVQGVKPDIITWNGLITGYTQSRDGKTALE 406
           ++++ SW A++  Y   G  EE ++L   M  +GV+PD                      
Sbjct: 152 ERNVFSWTAIMEMYCGLGDYEETIKLFYLMVNEGVRPDHF-------------------- 191

Query: 407 FFSKMRQTDVYPNTITISGALAACALTDNLKLGKEIHGFVIRNQMELSTGVGSALISMYS 586
                    V+P          AC+   N ++GK+++ +++    E ++ V  +++ M+ 
Sbjct: 192 ---------VFPK------VFKACSELKNYRVGKDVYDYMLSIGFEGNSCVKGSILDMFI 236

Query: 587 SCGQLRLGLSVFRELSTRDVVIWNSIVAACAQGGQGTNALNLLTDMKLSNVEPNTVT 757
            CG++ +    F E+  +DV +WN +V+     G+   AL  ++DMKLS V+P+ VT
Sbjct: 237 KCGRMDIARRFFEEIEFKDVFMWNIMVSGYTSKGEFKKALKCISDMKLSGVKPDQVT 293



 Score = 59.7 bits (143), Expect = 9e-07
 Identities = 35/146 (23%), Positives = 66/146 (45%)
 Frame = +2

Query: 467 LAACALTDNLKLGKEIHGFVIRNQMELSTGVGSALISMYSSCGQLRLGLSVFRELSTRDV 646
           L  C    NL+LG ++H  ++ N +++   +GS L+ +Y   G +     +F ++S R+V
Sbjct: 96  LQKCRKLYNLRLGFQVHAQLVVNGVDVCEFLGSRLLEVYCQTGCVEDARRMFDKMSERNV 155

Query: 647 VIWNSIVAACAQGGQGTNALNLLTDMKLSNVEPNTVTMVSXXXXXXXXXXXXQGKEIHQY 826
             W +I+      G     + L   M    V P+                   GK+++ Y
Sbjct: 156 FSWTAIMEMYCGLGDYEETIKLFYLMVNEGVRPDHFVFPKVFKACSELKNYRVGKDVYDY 215

Query: 827 ILRHGLETCNFIWNSLIDMYGRCGEI 904
           +L  G E  + +  S++DM+ +CG +
Sbjct: 216 MLSIGFEGNSCVKGSILDMFIKCGRM 241


>emb|CBI24272.3| unnamed protein product [Vitis vinifera]
          Length = 729

 Score =  231 bits (589), Expect = 2e-58
 Identities = 127/312 (40%), Positives = 180/312 (57%), Gaps = 9/312 (2%)
 Frame = +2

Query: 2    RKMVIEKVKPNSITIASVVSACTNLSLLRHGKEIRGYCIKAERLDLDVLVGNSFVDFYAK 181
            RKMV+E VKPNSITIAS VSACTNLSLLRHG+EI GYCIK E LD D+LVGNS VD+YAK
Sbjct: 201  RKMVLEGVKPNSITIASAVSACTNLSLLRHGREIHGYCIKVEELDSDLLVGNSLVDYYAK 260

Query: 182  CRNPEVARRNFDLIKQKDLVSWNAMLA--GYALRGCREEALELLDAMKV------QGVKP 337
            CR+ EVARR F +IKQ DLVSWNAMLA  G+   G  + ALE    M +      +    
Sbjct: 261  CRSVEVARRKFGMIKQTDLVSWNAMLAVTGFTQYGDGKAALEFFQRMHIACSVFSELSTR 320

Query: 338  DIITWNGLITGYTQSRDGKTALEFFSKMRQTDVYPNTITISGALAACALTDNLKLGKEIH 517
            D++ WN +I+   QS     AL+   +M  ++V  NT+T+  AL AC+    L+ GKEIH
Sbjct: 321  DVVVWNSIISACAQSGRSVNALDLLREMNLSNVEVNTVTMVSALPACSKLAALRQGKEIH 380

Query: 518  GFVIRNQMELSTGVGSALISMYSSCGQLRLGLSVFRELSTRDVVIWNSIVAACAQGGQGT 697
             F+IR  ++    + ++LI MY  CG ++    +F  +  RD+V WN +++     G G 
Sbjct: 381  QFIIRCGLDTCNFILNSLIDMYGRCGSIQKSRRIFDLMPQRDLVSWNVMISVYGMHGFGM 440

Query: 698  NALNLLTDMKLSNVEPNTVTMVSXXXXXXXXXXXXQG-KEIHQYILRHGLETCNFIWNSL 874
            +A+NL    +   ++PN +T  +            +G K        + ++     +  +
Sbjct: 441  DAVNLFQQFRTMGLKPNHITFTNLLSACSHSGLIEEGWKYFKMMKTEYAMDPAVEQYACM 500

Query: 875  IDMYGRCGEIRK 910
            +D+  R G+  +
Sbjct: 501  VDLLSRAGQFNE 512



 Score =  202 bits (514), Expect = 9e-50
 Identities = 124/346 (35%), Positives = 176/346 (50%), Gaps = 44/346 (12%)
 Frame = +2

Query: 8    MVIEKVKPNSITIASVVSACTNLSLLRHGKEIRGYCIKAERLDLDVLVGNSFVDFYAKCR 187
            MV E V+P+      V  AC+ L   R GK++  Y +     + +  V  S +D + KC 
Sbjct: 102  MVNEGVRPDHFVFPKVFKACSELKNYRVGKDVYDYMLSIG-FEGNSCVKGSILDMFIKCG 160

Query: 188  NPEVARRNFDLIKQKDLVSWNAMLAGYALRGCREEALELLDAMKVQGVKPDIITWNGLIT 367
              ++ARR F+ I+ KD+  WN M++GY  +G  ++AL +   M ++GVK           
Sbjct: 161  RMDIARRFFEEIEFKDVFMWNIMVSGYTSKGEFKKALNVFRKMVLEGVK----------- 209

Query: 368  GYTQSRDGKTALEFFSKMRQTDVYPNTITISGALAACALTDNLKLGKEIHGFVIR-NQME 544
                                    PN+ITI+ A++AC     L+ G+EIHG+ I+  +++
Sbjct: 210  ------------------------PNSITIASAVSACTNLSLLRHGREIHGYCIKVEELD 245

Query: 545  LSTGVGSALISMYSSC-------------------------------------------G 595
                VG++L+  Y+ C                                            
Sbjct: 246  SDLLVGNSLVDYYAKCRSVEVARRKFGMIKQTDLVSWNAMLAVTGFTQYGDGKAALEFFQ 305

Query: 596  QLRLGLSVFRELSTRDVVIWNSIVAACAQGGQGTNALNLLTDMKLSNVEPNTVTMVSXXX 775
            ++ +  SVF ELSTRDVV+WNSI++ACAQ G+  NAL+LL +M LSNVE NTVTMVS   
Sbjct: 306  RMHIACSVFSELSTRDVVVWNSIISACAQSGRSVNALDLLREMNLSNVEVNTVTMVSALP 365

Query: 776  XXXXXXXXXQGKEIHQYILRHGLETCNFIWNSLIDMYGRCGEIRKA 913
                     QGKEIHQ+I+R GL+TCNFI NSLIDMYGRCG I+K+
Sbjct: 366  ACSKLAALRQGKEIHQFIIRCGLDTCNFILNSLIDMYGRCGSIQKS 411



 Score =  104 bits (259), Expect = 3e-20
 Identities = 57/221 (25%), Positives = 106/221 (47%), Gaps = 1/221 (0%)
 Frame = +2

Query: 254 MLAGYALRGCREEALELLDAMKVQGVKPDIITWNGLITGYTQSRDGKTALEFFSKMRQTD 433
           +L  Y   GC E+A  + D M  + V     +W  ++  Y    D +  ++ F  M    
Sbjct: 51  LLEVYCQTGCVEDARRMFDKMSERNV----FSWTAIMEMYCGLGDYEETIKLFYLMVNEG 106

Query: 434 VYPNTITISGALAACALTDNLKLGKEIHGFVIRNQMELSTGVGSALISMYSSCGQLRLGL 613
           V P+         AC+   N ++GK+++ +++    E ++ V  +++ M+  CG++ +  
Sbjct: 107 VRPDHFVFPKVFKACSELKNYRVGKDVYDYMLSIGFEGNSCVKGSILDMFIKCGRMDIAR 166

Query: 614 SVFRELSTRDVVIWNSIVAACAQGGQGTNALNLLTDMKLSNVEPNTVTMVSXXXXXXXXX 793
             F E+  +DV +WN +V+     G+   ALN+   M L  V+PN++T+ S         
Sbjct: 167 RFFEEIEFKDVFMWNIMVSGYTSKGEFKKALNVFRKMVLEGVKPNSITIASAVSACTNLS 226

Query: 794 XXXQGKEIHQYILR-HGLETCNFIWNSLIDMYGRCGEIRKA 913
               G+EIH Y ++   L++   + NSL+D Y +C  +  A
Sbjct: 227 LLRHGREIHGYCIKVEELDSDLLVGNSLVDYYAKCRSVEVA 267



 Score = 59.7 bits (143), Expect = 9e-07
 Identities = 35/146 (23%), Positives = 66/146 (45%)
 Frame = +2

Query: 467 LAACALTDNLKLGKEIHGFVIRNQMELSTGVGSALISMYSSCGQLRLGLSVFRELSTRDV 646
           L  C    NL+LG ++H  ++ N +++   +GS L+ +Y   G +     +F ++S R+V
Sbjct: 17  LQKCRKLYNLRLGFQVHAQLVVNGVDVCEFLGSRLLEVYCQTGCVEDARRMFDKMSERNV 76

Query: 647 VIWNSIVAACAQGGQGTNALNLLTDMKLSNVEPNTVTMVSXXXXXXXXXXXXQGKEIHQY 826
             W +I+      G     + L   M    V P+                   GK+++ Y
Sbjct: 77  FSWTAIMEMYCGLGDYEETIKLFYLMVNEGVRPDHFVFPKVFKACSELKNYRVGKDVYDY 136

Query: 827 ILRHGLETCNFIWNSLIDMYGRCGEI 904
           +L  G E  + +  S++DM+ +CG +
Sbjct: 137 MLSIGFEGNSCVKGSILDMFIKCGRM 162


>ref|XP_004137054.1| PREDICTED: pentatricopeptide repeat-containing protein At5g16860-like
            [Cucumis sativus] gi|449479088|ref|XP_004155501.1|
            PREDICTED: pentatricopeptide repeat-containing protein
            At5g16860-like [Cucumis sativus]
          Length = 855

 Score =  195 bits (496), Expect = 1e-47
 Identities = 106/310 (34%), Positives = 176/310 (56%), Gaps = 12/310 (3%)
 Frame = +2

Query: 20   KVKPNSITIASVVSACTNLSLLRHGKEIRGYCIKAERLDLDVLVGNSFVDFYAKCRNPEV 199
            K++P++IT+ +++ AC ++  L+HGK++ G+ ++   +D DV VGN+ V  YAKC     
Sbjct: 229  KLRPDAITLVNILPACASVFALQHGKQVHGFSVRNGLVD-DVFVGNALVSMYAKCSKMNE 287

Query: 200  ARRNFDLIKQKDLVSWNAMLAGYALRGCREEALELLDAMKVQGVKPDIITWNGLITGYTQ 379
            A + F+ IK+KD+VSWNAM+ GY+  G  + AL L   M+ + +K D+ITW+ +I GY Q
Sbjct: 288  ANKVFEGIKKKDVVSWNAMVTGYSQIGSFDSALSLFKMMQEEDIKLDVITWSAVIAGYAQ 347

Query: 380  SRDGKTALEFFSKMRQTDVYPNTITISGALAACALTDNLKLGKEIHGFVIRNQMELSTG- 556
               G  AL+ F +M+   + PN +T++  L+ CA    L  GK+ H +VI+N + L+   
Sbjct: 348  KGHGFEALDVFRQMQLYGLEPNVVTLASLLSGCASVGALLYGKQTHAYVIKNILNLNWND 407

Query: 557  ------VGSALISMYSSCGQLRLGLSVFRELSTRD--VVIWNSIVAACAQGGQGTNALNL 712
                  V + LI MY+ C   R+  S+F  +  +D  VV W  ++   AQ G+  +AL L
Sbjct: 408  KEDDLLVLNGLIDMYAKCKSYRVARSIFDSIEGKDKNVVTWTVMIGGYAQHGEANDALKL 467

Query: 713  LTDM--KLSNVEPNTVTMVSXXXXXXXXXXXXQGKEIHQYILRHGLET-CNFIWNSLIDM 883
               +  + ++++PN  T+               G+++H Y LR+  E+   ++ N LIDM
Sbjct: 468  FAQIFKQKTSLKPNAFTLSCALMACARLGELRLGRQLHAYALRNENESEVLYVGNCLIDM 527

Query: 884  YGRCGEIRKA 913
            Y + G+I  A
Sbjct: 528  YSKSGDIDAA 537



 Score =  137 bits (346), Expect = 3e-30
 Identities = 91/315 (28%), Positives = 150/315 (47%), Gaps = 11/315 (3%)
 Frame = +2

Query: 2    RKMVIEKVKPNSITIASVVSACTNLSLLRHGKEIRGYCIKAERLDL-------DVLVGNS 160
            R+M +  ++PN +T+AS++S C ++  L +GK+   Y IK   L+L       D+LV N 
Sbjct: 359  RQMQLYGLEPNVVTLASLLSGCASVGALLYGKQTHAYVIK-NILNLNWNDKEDDLLVLNG 417

Query: 161  FVDFYAKCRNPEVARRNFDLIKQKDLVSWNAMLAGYALRGCREEALELLDAMKVQGVKPD 340
             +D YAKC++  VAR  FD I+ KD                                  +
Sbjct: 418  LIDMYAKCKSYRVARSIFDSIEGKD---------------------------------KN 444

Query: 341  IITWNGLITGYTQSRDGKTALEFFSKM--RQTDVYPNTITISGALAACALTDNLKLGKEI 514
            ++TW  +I GY Q  +   AL+ F+++  ++T + PN  T+S AL ACA    L+LG+++
Sbjct: 445  VVTWTVMIGGYAQHGEANDALKLFAQIFKQKTSLKPNAFTLSCALMACARLGELRLGRQL 504

Query: 515  HGFVIRNQMELST-GVGSALISMYSSCGQLRLGLSVFRELSTRDVVIWNSIVAACAQGGQ 691
            H + +RN+ E     VG+ LI MYS  G +    +VF  +  R+VV W S++      G+
Sbjct: 505  HAYALRNENESEVLYVGNCLIDMYSKSGDIDAARAVFDNMKLRNVVSWTSLMTGYGMHGR 564

Query: 692  GTNALNLLTDMKLSNVEPNTVTMVSXXXXXXXXXXXXQGK-EIHQYILRHGLETCNFIWN 868
            G  AL+L   M+      + +T +             QG    H  +   G+      + 
Sbjct: 565  GEEALHLFDQMQKLGFAVDGITFLVVLYACSHSGMVDQGMIYFHDMVKGFGITPGAEHYA 624

Query: 869  SLIDMYGRCGEIRKA 913
             ++D+ GR G + +A
Sbjct: 625  CMVDLLGRAGRLNEA 639



 Score =  125 bits (315), Expect = 1e-26
 Identities = 95/340 (27%), Positives = 142/340 (41%), Gaps = 45/340 (13%)
 Frame = +2

Query: 29   PNSITIASVVSACTNLSLLRHGKEIRGYCIKAERLDLDVLVGNSFVDFYAKCRNPEVARR 208
            P+  T   V+ AC  +  LRHG  +    + A  L  +V + NS V  Y +C   + A +
Sbjct: 125  PDHYTFPFVLKACGEIPSLRHGASVHAI-VCANGLGSNVFICNSIVAMYGRCGALDDAHQ 183

Query: 209  NFDLI---KQKDLVSWNAMLAGYALRGCREEALELLDAMKVQGVKPDIITWNGLITGYTQ 379
             FD +   K +D+VSWN++LA Y   G    AL +   M                     
Sbjct: 184  MFDEVLERKIEDIVSWNSILAAYVQGGQSRTALRIAFRM--------------------- 222

Query: 380  SRDGKTALEFFSKMRQTDVYPNTITISGALAACALTDNLKLGKEIHGFVIRNQMELSTGV 559
                     +  K+R     P+ IT+   L ACA    L+ GK++HGF +RN +     V
Sbjct: 223  ------GNHYSLKLR-----PDAITLVNILPACASVFALQHGKQVHGFSVRNGLVDDVFV 271

Query: 560  GSALISMYSSCGQLRLGLSVFRELSTRDVVIWN--------------------------- 658
            G+AL+SMY+ C ++     VF  +  +DVV WN                           
Sbjct: 272  GNALVSMYAKCSKMNEANKVFEGIKKKDVVSWNAMVTGYSQIGSFDSALSLFKMMQEEDI 331

Query: 659  --------SIVAACAQGGQGTNALNLLTDMKLSNVEPNTVTMVSXXXXXXXXXXXXQGKE 814
                    +++A  AQ G G  AL++   M+L  +EPN VT+ S             GK+
Sbjct: 332  KLDVITWSAVIAGYAQKGHGFEALDVFRQMQLYGLEPNVVTLASLLSGCASVGALLYGKQ 391

Query: 815  IHQYILRHGL-------ETCNFIWNSLIDMYGRCGEIRKA 913
             H Y++++ L       E    + N LIDMY +C   R A
Sbjct: 392  THAYVIKNILNLNWNDKEDDLLVLNGLIDMYAKCKSYRVA 431



 Score = 95.9 bits (237), Expect = 1e-17
 Identities = 62/225 (27%), Positives = 105/225 (46%), Gaps = 6/225 (2%)
 Frame = +2

Query: 257 LAGYALRGCREEALELLDAMKVQGVKPDIITWNGLITGYTQSRDGKTALEFFSKMRQTDV 436
           +  Y   G   EA+ LL  +        +  WN LI    +       L F+ +M++   
Sbjct: 66  VGAYIECGASAEAVSLLQRLIPS--HSTVFWWNALIRRSVKLGLLDDTLGFYCQMQRLGW 123

Query: 437 YPNTITISGALAACALTDNLKLGKEIHGFVIRNQMELSTGVGSALISMYSSCGQLRLGLS 616
            P+  T    L AC    +L+ G  +H  V  N +  +  + +++++MY  CG L     
Sbjct: 124 LPDHYTFPFVLKACGEIPSLRHGASVHAIVCANGLGSNVFICNSIVAMYGRCGALDDAHQ 183

Query: 617 VFRELSTR---DVVIWNSIVAACAQGGQGTNALNLLTDM---KLSNVEPNTVTMVSXXXX 778
           +F E+  R   D+V WNSI+AA  QGGQ   AL +   M       + P+ +T+V+    
Sbjct: 184 MFDEVLERKIEDIVSWNSILAAYVQGGQSRTALRIAFRMGNHYSLKLRPDAITLVNILPA 243

Query: 779 XXXXXXXXQGKEIHQYILRHGLETCNFIWNSLIDMYGRCGEIRKA 913
                    GK++H + +R+GL    F+ N+L+ MY +C ++ +A
Sbjct: 244 CASVFALQHGKQVHGFSVRNGLVDDVFVGNALVSMYAKCSKMNEA 288


>ref|XP_002528032.1| pentatricopeptide repeat-containing protein, putative [Ricinus
            communis] gi|223532562|gb|EEF34350.1| pentatricopeptide
            repeat-containing protein, putative [Ricinus communis]
          Length = 730

 Score =  192 bits (488), Expect = 9e-47
 Identities = 110/305 (36%), Positives = 169/305 (55%), Gaps = 1/305 (0%)
 Frame = +2

Query: 2    RKMVIEKVKPNSITIASVVSACTNLSLLRHGKEIRGYCIKAERLDLDVLVGNSFVDFYAK 181
            ++M  + ++P+  T  SV+ AC     +  GK++    I A  L  ++ V NS V  YAK
Sbjct: 183  KQMTHKGIRPDKFTYPSVLKACGEKLDIAFGKKLHA-SINASCLGWNLFVHNSLVSMYAK 241

Query: 182  CRNPEVARRNFDLIKQKDLVSWNAMLAGYALRGCREEALELLDAMKVQGVKPDIITWNGL 361
                  AR  F+ + ++D VSWN M++GYA +G  +EA EL   M+V+G++ +IITWN +
Sbjct: 242  TGELSTARCLFENMLERDDVSWNTMISGYASKGMWKEAFELFGKMRVEGIELNIITWNTI 301

Query: 362  ITGYTQSRDGKTALEFFSKMRQTDVYPNTITISGALAACALTDNLKLGKEIHGFVIRNQM 541
              G  QS + + ALE  S MR   +  +++     L AC+    +KLG+EIHG  IR+  
Sbjct: 302  AGGCVQSGNFEEALELLSHMRSYGIDMDSVATIIGLGACSHIGAIKLGREIHGSAIRSFY 361

Query: 542  ELSTGVGSALISMYSSCGQLRLGLSVFRELSTRDVVIWNSIVAACAQGGQGTNALNLLTD 721
            +    V +ALI+MYS C  LR   ++F+   T++++ WNS+++      +   A  L  +
Sbjct: 362  DGVDNVKNALITMYSRCKYLRHAYNLFQSTRTKNIITWNSMLSGYTHMDRSEEASFLFRE 421

Query: 722  MKLSNVEPNTVTMVSXXXXXXXXXXXXQGKEIHQYILRH-GLETCNFIWNSLIDMYGRCG 898
            M LS +EPN VT+ S             GKE H YILR  G +    +WNSL+DMY R G
Sbjct: 422  MLLSGIEPNYVTIASILPLCARVANLQHGKEFHCYILRRAGFKDYLLLWNSLVDMYARSG 481

Query: 899  EIRKA 913
            ++ +A
Sbjct: 482  KVLEA 486



 Score =  101 bits (251), Expect = 3e-19
 Identities = 72/295 (24%), Positives = 139/295 (47%), Gaps = 4/295 (1%)
 Frame = +2

Query: 41   TIASVVS--ACTNLSLLRHGKEIRGYCIKAERLDLDVLVGNSFVDFYAKCRNPEVARRNF 214
            ++A+++   AC+++  ++ G+EI G  I++    +D  V N+ +  Y++C+    A   F
Sbjct: 330  SVATIIGLGACSHIGAIKLGREIHGSAIRSFYDGVDN-VKNALITMYSRCKYLRHAYNLF 388

Query: 215  DLIKQKDLVSWNAMLAGYALRGCREEALELLDAMKVQGVKPDIITWNGLITGYTQSRDGK 394
               + K+                                   IITWN +++GYT     +
Sbjct: 389  QSTRTKN-----------------------------------IITWNSMLSGYTHMDRSE 413

Query: 395  TALEFFSKMRQTDVYPNTITISGALAACALTDNLKLGKEIHGFVIRNQ-MELSTGVGSAL 571
             A   F +M  + + PN +TI+  L  CA   NL+ GKE H +++R    +    + ++L
Sbjct: 414  EASFLFREMLLSGIEPNYVTIASILPLCARVANLQHGKEFHCYILRRAGFKDYLLLWNSL 473

Query: 572  ISMYSSCGQLRLGLSVFRELSTRDVVIWNSIVAACAQGGQGTNALNLLTDMKLSNVEPNT 751
            + MY+  G++     +F  +S RD V + S++A     G+G  AL L  +MK  +++P+ 
Sbjct: 474  VDMYARSGKVLEAKRLFDSISRRDEVTYTSLIAGYGIQGEGREALKLFDEMKKRHIKPDH 533

Query: 752  VTMVSXXXXXXXXXXXXQGKEIHQYI-LRHGLETCNFIWNSLIDMYGRCGEIRKA 913
            VTMV+            +G ++ + +   +G+      +  ++D++GR G + KA
Sbjct: 534  VTMVAVLSACSHSGLVTEGIKLFELMPSAYGIIPRLEHFACMVDLFGRAGLLHKA 588



 Score = 92.4 bits (228), Expect = 1e-16
 Identities = 47/140 (33%), Positives = 83/140 (59%)
 Frame = +2

Query: 2   RKMVIEKVKPNSITIASVVSACTNLSLLRHGKEIRGYCIKAERLDLDVLVGNSFVDFYAK 181
           R+M++  ++PN +TIAS++  C  ++ L+HGKE   Y ++       +L+ NS VD YA+
Sbjct: 420 REMLLSGIEPNYVTIASILPLCARVANLQHGKEFHCYILRRAGFKDYLLLWNSLVDMYAR 479

Query: 182 CRNPEVARRNFDLIKQKDLVSWNAMLAGYALRGCREEALELLDAMKVQGVKPDIITWNGL 361
                 A+R FD I ++D V++ +++AGY ++G   EAL+L D MK + +KPD +T   +
Sbjct: 480 SGKVLEAKRLFDSISRRDEVTYTSLIAGYGIQGEGREALKLFDEMKKRHIKPDHVTMVAV 539

Query: 362 ITGYTQSRDGKTALEFFSKM 421
           ++  + S      ++ F  M
Sbjct: 540 LSACSHSGLVTEGIKLFELM 559



 Score = 86.7 bits (213), Expect = 7e-15
 Identities = 67/305 (21%), Positives = 126/305 (41%), Gaps = 14/305 (4%)
 Frame = +2

Query: 41  TIASVVSACTNLSLLRHGKEIRGYCIKAERLDLDVLVGNSFVDFYAKCRNPEVARRNFDL 220
           +++S++ +C NL  L  GK++    I        ++V    V FY           NFDL
Sbjct: 95  SVSSLLLSCVNLKSLSQGKQLHTLIISLGFEQHPIIVPK-LVTFYT----------NFDL 143

Query: 221 IKQKDLVS----------WNAMLAGYALRGCREEALELLDAMKVQGVKPDIITWNGLITG 370
           +     ++          WN +++ Y   G   EAL     M  +G++PD  T+  ++  
Sbjct: 144 LADAHTITENSNILHPLPWNLLISSYVRNGLHGEALSAYKQMTHKGIRPDKFTYPSVLKA 203

Query: 371 YTQSRDGKTALEFFSKMRQTDVYPNTITISGALAACALTDNLKLGKEIHGFVIRNQMELS 550
             +  D     +  + +  + +  N    +  ++  A T  L   +     +  N +E  
Sbjct: 204 CGEKLDIAFGKKLHASINASCLGWNLFVHNSLVSMYAKTGELSTAR----CLFENMLERD 259

Query: 551 TGVGSALISMYSSCGQLRLGLSVFRELSTR----DVVIWNSIVAACAQGGQGTNALNLLT 718
               + +IS Y+S G  +    +F ++       +++ WN+I   C Q G    AL LL+
Sbjct: 260 DVSWNTMISGYASKGMWKEAFELFGKMRVEGIELNIITWNTIAGGCVQSGNFEEALELLS 319

Query: 719 DMKLSNVEPNTVTMVSXXXXXXXXXXXXQGKEIHQYILRHGLETCNFIWNSLIDMYGRCG 898
            M+   ++ ++V  +              G+EIH   +R   +  + + N+LI MY RC 
Sbjct: 320 HMRSYGIDMDSVATIIGLGACSHIGAIKLGREIHGSAIRSFYDGVDNVKNALITMYSRCK 379

Query: 899 EIRKA 913
            +R A
Sbjct: 380 YLRHA 384