BLASTX nr result

ID: Papaver22_contig00033920 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Papaver22_contig00033920
         (717 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002308835.1| predicted protein [Populus trichocarpa] gi|2...    75   2e-22
emb|CAN60235.1| hypothetical protein VITISV_028850 [Vitis vinifera]    75   5e-22
ref|XP_002284103.1| PREDICTED: DEAD-box ATP-dependent RNA helica...    75   8e-22
emb|CBI31778.3| unnamed protein product [Vitis vinifera]               75   8e-22
ref|NP_188872.2| DEAD-box ATP-dependent RNA helicase 53 [Arabido...    74   4e-21

>ref|XP_002308835.1| predicted protein [Populus trichocarpa] gi|222854811|gb|EEE92358.1|
           predicted protein [Populus trichocarpa]
          Length = 556

 Score = 75.5 bits (184), Expect(2) = 2e-22
 Identities = 44/123 (35%), Positives = 67/123 (54%)
 Frame = -3

Query: 430 SRQVQSAFRDTFPSVDIACAHYDHVKNKAYPTVIPKNIDAIVGTPGSIAHLLKGGGVNLS 251
           +RQVQ  F D+ PS+D  C  Y  V   +    +   +D +VGTPG I  L+K G +NLS
Sbjct: 154 ARQVQKEFHDSAPSLDTICL-YGGVPISSQMRELEYGVDVVVGTPGRIIDLMKRGSLNLS 212

Query: 250 ELLHTIFIEADDIHEGFETAALEVIFGKIPPSCKSMIFARGTMSTEIRKLANKWLRKPTE 71
           E+ + +  EAD +        +E I  ++P    SM F+  TM + I++L  K+L+ P  
Sbjct: 213 EIKYVVLDEADQMLGVGFVDDIETILSRLPKKRHSMCFS-ATMPSWIKQLVRKYLKDPLT 271

Query: 70  VDL 62
           +DL
Sbjct: 272 IDL 274



 Score = 56.2 bits (134), Expect(2) = 2e-22
 Identities = 39/91 (42%), Positives = 54/91 (59%)
 Frame = -2

Query: 695 DISDLEIEEETKNALSKKGITKLSPVQSLLLDIGITTGRCGVIGRTTRGTWKKLASWIQI 516
           +IS+L I +E  N+L+KKGITKL P+Q  +L+  +  G+  + GR   GT K LA  I I
Sbjct: 68  EISNLGISKEIVNSLAKKGITKLFPIQKAVLEPAM-QGK-DMFGRARTGTGKTLAFGIPI 125

Query: 515 ADTISKIKKDIAKHGNIKKGSDALALVFVPT 423
            D I +  K   +HG   KG + LA+V  PT
Sbjct: 126 LDKIIEFNK---QHG---KGRNPLAMVMAPT 150


>emb|CAN60235.1| hypothetical protein VITISV_028850 [Vitis vinifera]
          Length = 666

 Score = 75.5 bits (184), Expect(2) = 5e-22
 Identities = 46/124 (37%), Positives = 71/124 (57%), Gaps = 1/124 (0%)
 Frame = -3

Query: 430 SRQVQSAFRDTFPSVDIACAHYDHVKNKAYPTVIPKNIDAIVGTPGSIAHLLKGGGVNLS 251
           +RQV+  F ++ P++D  C  Y           +   +D +VGTPG I  L+K G +NLS
Sbjct: 202 ARQVEKEFXESAPNLDTLCV-YGGTPISRQMNSLDYGVDVVVGTPGRIIDLIKRGALNLS 260

Query: 250 ELLHTIFIEADD-IHEGFETAALEVIFGKIPPSCKSMIFARGTMSTEIRKLANKWLRKPT 74
           E+   +  EAD  +  GFE   +E+I  K+P + +SM+F+  TM + IRKL  K+L+ P 
Sbjct: 261 EVQFVVLDEADQMLAVGFE-EDVEMILEKLPQNRQSMMFS-ATMPSWIRKLTQKYLKNPL 318

Query: 73  EVDL 62
            +DL
Sbjct: 319 TIDL 322



 Score = 55.1 bits (131), Expect(2) = 5e-22
 Identities = 41/91 (45%), Positives = 54/91 (59%)
 Frame = -2

Query: 695 DISDLEIEEETKNALSKKGITKLSPVQSLLLDIGITTGRCGVIGRTTRGTWKKLASWIQI 516
           +IS L I +E  +AL+ KGITKL P+Q  +L+  +  GR  +IGR   GT K LA  I I
Sbjct: 116 EISKLGIAQEIVSALANKGITKLFPIQRAVLEPAM-QGR-DMIGRARTGTGKTLAFGIPI 173

Query: 515 ADTISKIKKDIAKHGNIKKGSDALALVFVPT 423
            D   K+ +  AKHG   +G + LALV  PT
Sbjct: 174 MD---KVIQYNAKHG---RGRNPLALVLAPT 198


>ref|XP_002284103.1| PREDICTED: DEAD-box ATP-dependent RNA helicase 53-like [Vitis
           vinifera]
          Length = 666

 Score = 74.7 bits (182), Expect(2) = 8e-22
 Identities = 46/124 (37%), Positives = 71/124 (57%), Gaps = 1/124 (0%)
 Frame = -3

Query: 430 SRQVQSAFRDTFPSVDIACAHYDHVKNKAYPTVIPKNIDAIVGTPGSIAHLLKGGGVNLS 251
           +RQV+  F ++ P++D  C  Y           +   +D +VGTPG I  L+K G +NLS
Sbjct: 202 ARQVEKEFCESAPNLDTLCV-YGGTPISRQMNSLDYGVDVVVGTPGRIIDLIKRGALNLS 260

Query: 250 ELLHTIFIEADD-IHEGFETAALEVIFGKIPPSCKSMIFARGTMSTEIRKLANKWLRKPT 74
           E+   +  EAD  +  GFE   +E+I  K+P + +SM+F+  TM + IRKL  K+L+ P 
Sbjct: 261 EVQFVVLDEADQMLAVGFE-EDVEMILEKLPQNRQSMMFS-ATMPSWIRKLTQKYLKNPL 318

Query: 73  EVDL 62
            +DL
Sbjct: 319 TIDL 322



 Score = 55.1 bits (131), Expect(2) = 8e-22
 Identities = 41/91 (45%), Positives = 54/91 (59%)
 Frame = -2

Query: 695 DISDLEIEEETKNALSKKGITKLSPVQSLLLDIGITTGRCGVIGRTTRGTWKKLASWIQI 516
           +IS L I +E  +AL+ KGITKL P+Q  +L+  +  GR  +IGR   GT K LA  I I
Sbjct: 116 EISKLGIAQEIVSALANKGITKLFPIQRAVLEPAM-QGR-DMIGRARTGTGKTLAFGIPI 173

Query: 515 ADTISKIKKDIAKHGNIKKGSDALALVFVPT 423
            D   K+ +  AKHG   +G + LALV  PT
Sbjct: 174 MD---KVIQYNAKHG---RGRNPLALVLAPT 198


>emb|CBI31778.3| unnamed protein product [Vitis vinifera]
          Length = 568

 Score = 74.7 bits (182), Expect(2) = 8e-22
 Identities = 46/124 (37%), Positives = 71/124 (57%), Gaps = 1/124 (0%)
 Frame = -3

Query: 430 SRQVQSAFRDTFPSVDIACAHYDHVKNKAYPTVIPKNIDAIVGTPGSIAHLLKGGGVNLS 251
           +RQV+  F ++ P++D  C  Y           +   +D +VGTPG I  L+K G +NLS
Sbjct: 202 ARQVEKEFCESAPNLDTLCV-YGGTPISRQMNSLDYGVDVVVGTPGRIIDLIKRGALNLS 260

Query: 250 ELLHTIFIEADD-IHEGFETAALEVIFGKIPPSCKSMIFARGTMSTEIRKLANKWLRKPT 74
           E+   +  EAD  +  GFE   +E+I  K+P + +SM+F+  TM + IRKL  K+L+ P 
Sbjct: 261 EVQFVVLDEADQMLAVGFE-EDVEMILEKLPQNRQSMMFS-ATMPSWIRKLTQKYLKNPL 318

Query: 73  EVDL 62
            +DL
Sbjct: 319 TIDL 322



 Score = 55.1 bits (131), Expect(2) = 8e-22
 Identities = 41/91 (45%), Positives = 54/91 (59%)
 Frame = -2

Query: 695 DISDLEIEEETKNALSKKGITKLSPVQSLLLDIGITTGRCGVIGRTTRGTWKKLASWIQI 516
           +IS L I +E  +AL+ KGITKL P+Q  +L+  +  GR  +IGR   GT K LA  I I
Sbjct: 116 EISKLGIAQEIVSALANKGITKLFPIQRAVLEPAM-QGR-DMIGRARTGTGKTLAFGIPI 173

Query: 515 ADTISKIKKDIAKHGNIKKGSDALALVFVPT 423
            D   K+ +  AKHG   +G + LALV  PT
Sbjct: 174 MD---KVIQYNAKHG---RGRNPLALVLAPT 198


>ref|NP_188872.2| DEAD-box ATP-dependent RNA helicase 53 [Arabidopsis thaliana]
           gi|75335516|sp|Q9LUW5.1|RH53_ARATH RecName:
           Full=DEAD-box ATP-dependent RNA helicase 53
           gi|9293867|dbj|BAB01770.1| DEAD-Box RNA helicase-like
           protein [Arabidopsis thaliana]
           gi|17064852|gb|AAL32580.1| DEAD-Box RNA helicase-like
           protein [Arabidopsis thaliana]
           gi|20259816|gb|AAM13255.1| DEAD-Box RNA helicase-like
           protein [Arabidopsis thaliana]
           gi|332643101|gb|AEE76622.1| DEAD-box ATP-dependent RNA
           helicase 53 [Arabidopsis thaliana]
          Length = 616

 Score = 73.6 bits (179), Expect(2) = 4e-21
 Identities = 44/123 (35%), Positives = 66/123 (53%)
 Frame = -3

Query: 430 SRQVQSAFRDTFPSVDIACAHYDHVKNKAYPTVIPKNIDAIVGTPGSIAHLLKGGGVNLS 251
           +RQV+  FR++ PS+D  C  Y           +   +D  VGTPG +  L+K G +NLS
Sbjct: 191 ARQVEKEFRESAPSLDTICL-YGGTPIGQQMRQLDYGVDVAVGTPGRVIDLMKRGALNLS 249

Query: 250 ELLHTIFIEADDIHEGFETAALEVIFGKIPPSCKSMIFARGTMSTEIRKLANKWLRKPTE 71
           E+   +  EAD + +      +E+I  K+P   +SM+F+  TM + IR L  K+L  P  
Sbjct: 250 EVQFVVLDEADQMLQVGFAEDVEIILEKLPEKRQSMMFS-ATMPSWIRSLTKKYLNNPLT 308

Query: 70  VDL 62
           VDL
Sbjct: 309 VDL 311



 Score = 53.9 bits (128), Expect(2) = 4e-21
 Identities = 42/90 (46%), Positives = 50/90 (55%)
 Frame = -2

Query: 692 ISDLEIEEETKNALSKKGITKLSPVQSLLLDIGITTGRCGVIGRTTRGTWKKLASWIQIA 513
           IS+L I  E   ALS KGI KL P+Q  +L+  +  GR  +IGR   GT K LA  I I 
Sbjct: 106 ISELGISPEIVKALSSKGIEKLFPIQKAVLEPAM-EGR-DMIGRARTGTGKTLAFGIPII 163

Query: 512 DTISKIKKDIAKHGNIKKGSDALALVFVPT 423
           D   KI K  AKHG   +G + L LV  PT
Sbjct: 164 D---KIIKYNAKHG---RGRNPLCLVLAPT 187


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