BLASTX nr result

ID: Papaver22_contig00033501 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Papaver22_contig00033501
         (1014 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CCA66040.1| hypothetical protein [Beta vulgaris subsp. vulga...    78   4e-12
emb|CCA66036.1| hypothetical protein [Beta vulgaris subsp. vulga...    72   2e-10
ref|XP_002454676.1| hypothetical protein SORBIDRAFT_04g035460 [S...    70   1e-09
pir||T00833 RNA-directed DNA polymerase homolog T13L16.7 - Arabi...    69   1e-09
gb|AAD24601.1| putative non-LTR retroelement reverse transcripta...    68   3e-09

>emb|CCA66040.1| hypothetical protein [Beta vulgaris subsp. vulgaris]
          Length = 1362

 Score = 77.8 bits (190), Expect = 4e-12
 Identities = 61/220 (27%), Positives = 94/220 (42%), Gaps = 7/220 (3%)
 Frame = +3

Query: 3    VFTTSSCYKLLCQQDNISSTTLNLSPR---FWLKFWKLNMPYKYQIFLWKGLHNALPVKA 173
            +F+  SCY  L +   + +  L    R    W + W+L  P K   FLW+    +L VK 
Sbjct: 1015 IFSVRSCY-WLGRLGPVRTWQLQHGERETELWRRVWQLQGPPKLSHFLWRACKGSLAVKG 1073

Query: 174  RLFTPMNYVDQQCVLCNSSHSEDIDHLLLNCPFSRAIWR---YFFPQQHTSMMQFASLLS 344
            RLF+    VD  C +C     E I+H L +C F+RAIW+   +     +  +  F+  L 
Sbjct: 1074 RLFSRHISVDATCSVCGDP-DESINHALFDCTFARAIWQVSGFASLMMNAPLSSFSERLE 1132

Query: 345  WVQTWQSHDSQINIHSTPRVIRIIVFIMHFIRKHRCKVIFSNLSPNHTSVIHQVSFYIAK 524
            W+            H+T    R +   M      R K+IF N   +   V  + S  +A 
Sbjct: 1133 WLAK----------HATKEEFRTMCSFMWAGWFCRNKLIFENELSDAPLVAKRFSKLVAD 1182

Query: 525  HQLHAASSIPAFFKYVVND-VWNPPPLNVLKINIDASYKP 641
            +  +A S          +  +W+PPP  + K+N DA   P
Sbjct: 1183 YCEYAGSVFRGSGGGCGSSALWSPPPTGMFKVNFDAHLSP 1222


>emb|CCA66036.1| hypothetical protein [Beta vulgaris subsp. vulgaris]
          Length = 1369

 Score = 72.4 bits (176), Expect = 2e-10
 Identities = 54/212 (25%), Positives = 89/212 (41%), Gaps = 3/212 (1%)
 Frame = +3

Query: 6    FTTSSCY--KLLCQQDNISSTTLNLSPRFWLKFWKLNMPYKYQIFLWKGLHNALPVKARL 179
            FT  S Y  +LL  +    ST+   + + W K WK  +P K ++F WK +HN L V   +
Sbjct: 1022 FTVRSAYYHELLEDRKTGPSTSRGPNLKLWQKIWKAKIPPKVKLFSWKAIHNGLAVYTNM 1081

Query: 180  FTPMNYVDQQCVLCNSSHSEDIDHLLLNCPFSRAIWRYFFPQQ-HTSMMQFASLLSWVQT 356
                  +D  C  C     E  +HL+  C  S   W Y  P + HT  ++  S   WV  
Sbjct: 1082 RKRGMNIDGACPRCGEK-EETTEHLIWGCDESSRAW-YISPLRIHTGNIEAGSFRIWV-- 1137

Query: 357  WQSHDSQINIHSTPRVIRIIVFIMHFIRKHRCKVIFSNLSPNHTSVIHQVSFYIAKHQLH 536
                +S ++ H       +   I   I   R K +F         V+ +    + + +  
Sbjct: 1138 ----ESLLDTHKDTEWWALFWMICWNIWLGRNKWVFEKKKLAFQEVVERAVRGVMEFEEE 1193

Query: 537  AASSIPAFFKYVVNDVWNPPPLNVLKINIDAS 632
             A + P        + W+ PP+ ++K+N+DA+
Sbjct: 1194 CAHTSPVETLNTHENGWSVPPVGMVKLNVDAA 1225


>ref|XP_002454676.1| hypothetical protein SORBIDRAFT_04g035460 [Sorghum bicolor]
           gi|241934507|gb|EES07652.1| hypothetical protein
           SORBIDRAFT_04g035460 [Sorghum bicolor]
          Length = 276

 Score = 69.7 bits (169), Expect = 1e-09
 Identities = 55/222 (24%), Positives = 97/222 (43%), Gaps = 9/222 (4%)
 Frame = +3

Query: 3   VFTTSSCY---------KLLCQQDNISSTTLNLSPRFWLKFWKLNMPYKYQIFLWKGLHN 155
           VF+  S Y         KL+ Q+   SS +L    + W K W++  P K +  +W+  HN
Sbjct: 16  VFSVKSAYHVLEDEAESKLVRQRGESSSQSLGSRKQMWKKLWRVPRPPKIKQCVWRVAHN 75

Query: 156 ALPVKARLFTPMNYVDQQCVLCNSSHSEDIDHLLLNCPFSRAIWRYFFPQQHTSMMQFAS 335
           +L  K  + +    +D +C +C   + ED  H    C   R +WR       T  ++ A+
Sbjct: 76  SLAHKMNIKSKKISLDTRCPVC-LKYDEDGAHCFFKCKEVRKVWREL--GLETLRLKLAN 132

Query: 336 LLSWVQTWQSHDSQINIHSTPRVIRIIVFIMHFIRKHRCKVIFSNLSPNHTSVIHQVSFY 515
           LLS V+      ++I        + + V I  +    R KV    L P+  + ++ +   
Sbjct: 133 LLSAVEV----VAEILRQREDICLAVFVLIWKW-WSMRNKVNVGELMPSAQATVNAIRDM 187

Query: 516 IAKHQLHAASSIPAFFKYVVNDVWNPPPLNVLKINIDASYKP 641
           + ++ L     +     + V   W+PP   +LK+N+D S+ P
Sbjct: 188 V-QNILKEGCKMHQHQSFEVQQTWSPPAEGILKVNVDGSFLP 228


>pir||T00833 RNA-directed DNA polymerase homolog T13L16.7 - Arabidopsis thaliana
            (fragment)
          Length = 1365

 Score = 69.3 bits (168), Expect = 1e-09
 Identities = 51/182 (28%), Positives = 87/182 (47%), Gaps = 5/182 (2%)
 Frame = +3

Query: 93   KFWKLNMPYKYQIFLWKGLHNALPVKARLFTPMNYVDQQCVLCNSSHSEDIDHLLLNCPF 272
            K W L+   K +IFLWK LH A+PV+ RL T     D  C++C+ + +E I+H+L  CP 
Sbjct: 1044 KIWNLHTAPKIRIFLWKALHGAIPVEDRLRTRGIRSDDGCLMCD-TENETINHILFECPL 1102

Query: 273  SRAIWRYFFPQQHTSMMQ---FASLLSWVQTWQSHDSQINIHSTPRVIRII-VFIMHFIR 440
            +R +W         S      + ++   +   Q +D        P  +R +  +I+ F+ 
Sbjct: 1103 ARQVWAITHLSSAGSEFSNSVYTNMSRLIDLTQQND-------LPHHLRFVSPWILWFLW 1155

Query: 441  KHRCKVIFSNLSPNHTSVIHQVSFYIAKHQLHAASS-IPAFFKYVVNDVWNPPPLNVLKI 617
            K+R  ++F       T+++ +   Y A H+  +A + +    K++    W PP    LK 
Sbjct: 1156 KNRNALLFEGKGSITTTLVDKA--YEAYHEWFSAQTHMQNDEKHLKITKWCPPLPGELKC 1213

Query: 618  NI 623
            NI
Sbjct: 1214 NI 1215


>gb|AAD24601.1| putative non-LTR retroelement reverse transcriptase [Arabidopsis
            thaliana]
          Length = 1319

 Score = 68.2 bits (165), Expect = 3e-09
 Identities = 52/198 (26%), Positives = 85/198 (42%), Gaps = 8/198 (4%)
 Frame = +3

Query: 93   KFWKLNMPYKYQIFLWKGLHNALPVKARLFTPMNYVDQQCVLCNSSHSEDIDHLLLNCPF 272
            K W L    K ++F+WK L  AL V+ RL +        C+ C     E I+HLL  CPF
Sbjct: 997  KVWSLETVPKIKVFMWKALKGALAVEDRLRSRGIRTADGCLFC-KEEIETINHLLFQCPF 1055

Query: 273  SRAIWRYFF---PQQHTSMMQFASLLSWVQTWQSHDSQINIHSTPRVIRII-VFIMHFIR 440
            +R +W       P        F+++   +Q  Q+          PR +R +  +++  I 
Sbjct: 1056 ARQVWALSLIQAPATGFGTSIFSNINHVIQNSQN-------FGIPRHMRTVSPWLLWEIW 1108

Query: 441  KHRCKVIFSNLSPNHTSVI----HQVSFYIAKHQLHAASSIPAFFKYVVNDVWNPPPLNV 608
            K+R K +F       + ++     + + +I   +  +    P+  K      WNPPP   
Sbjct: 1109 KNRNKTLFQGTGLTSSEIVAKAYEECNLWINAQEKSSGGVSPSEHK------WNPPPAGE 1162

Query: 609  LKINIDASYKPLSLLAGI 662
            LK NI  ++     LAG+
Sbjct: 1163 LKCNIGVAWSRQKQLAGV 1180


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