BLASTX nr result

ID: Papaver22_contig00032275 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Papaver22_contig00032275
         (504 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003531700.1| PREDICTED: (6-4)DNA photolyase-like [Glycine...   174   4e-68
dbj|BAJ53248.1| JHL25H03.11 [Jatropha curcas]                         176   3e-67
ref|NP_566520.1| (6-4)DNA photolyase [Arabidopsis thaliana] gi|3...   172   1e-66
pdb|3FY4|A Chain A, (6-4) Photolyase Crystal Structure gi|228312...   172   1e-66
ref|XP_002285327.2| PREDICTED: (6-4)DNA photolyase [Vitis vinifera]   175   3e-66

>ref|XP_003531700.1| PREDICTED: (6-4)DNA photolyase-like [Glycine max]
          Length = 535

 Score =  174 bits (440), Expect(2) = 4e-68
 Identities = 75/84 (89%), Positives = 80/84 (95%)
 Frame = +1

Query: 1   HSVACFLTRGDLLIHWERGRDVFERLLIDSDWAINNGNWMWLSCSSFFYQYNRIYSPISF 180
           HSVACFLTRGDL +HWE+GRDVFERLLIDSDWAINNGNWMWLSCSSFFYQYNRIYSP +F
Sbjct: 365 HSVACFLTRGDLFVHWEKGRDVFERLLIDSDWAINNGNWMWLSCSSFFYQYNRIYSPTTF 424

Query: 181 GKKYDPKGNYIRHFLPVLKDMPAD 252
           GKKYDP G+YIRHFLPVLKDMP +
Sbjct: 425 GKKYDPNGDYIRHFLPVLKDMPRE 448



 Score =  109 bits (273), Expect(2) = 4e-68
 Identities = 54/87 (62%), Positives = 66/87 (75%), Gaps = 4/87 (4%)
 Frame = +3

Query: 252 YIYAPWTAPLAVQTKANCIIGRDYPRPVVDHDIASKECKRKMGEAYALNRQSNGSVISGE 431
           YIY PWTAP ++QTKANCIIG+DYP PVV HD ASKEC+RKMGEAYALN++ NG ++S +
Sbjct: 449 YIYEPWTAPKSIQTKANCIIGKDYPMPVVSHDSASKECRRKMGEAYALNKELNG-LVSED 507

Query: 432 HKKNSRKKSEE----EQNCKSQKQKLI 500
             KN R+K +E    E   K  KQ+LI
Sbjct: 508 DLKNLRRKLDESEGQEAGAKRYKQQLI 534


>dbj|BAJ53248.1| JHL25H03.11 [Jatropha curcas]
          Length = 536

 Score =  176 bits (445), Expect(2) = 3e-67
 Identities = 76/84 (90%), Positives = 80/84 (95%)
 Frame = +1

Query: 1   HSVACFLTRGDLLIHWERGRDVFERLLIDSDWAINNGNWMWLSCSSFFYQYNRIYSPISF 180
           H VACFLTRGDL +HWE+GRDVFERLLIDSDWAINNGNW+WLSCSSFFYQYNRIYSPISF
Sbjct: 368 HCVACFLTRGDLFVHWEKGRDVFERLLIDSDWAINNGNWLWLSCSSFFYQYNRIYSPISF 427

Query: 181 GKKYDPKGNYIRHFLPVLKDMPAD 252
           GKKYDP GNYIRHFLPVLKDMP +
Sbjct: 428 GKKYDPNGNYIRHFLPVLKDMPKE 451



 Score =  104 bits (260), Expect(2) = 3e-67
 Identities = 49/84 (58%), Positives = 62/84 (73%), Gaps = 3/84 (3%)
 Frame = +3

Query: 252 YIYAPWTAPLAVQTKANCIIGRDYPRPVVDHDIASKECKRKMGEAYALNRQSNGSVIS-- 425
           +IY PWTAPL+VQTKA CIIGRDYP+PVV HD ASKECKRK+ EAYALN++ NG +    
Sbjct: 452 FIYEPWTAPLSVQTKAKCIIGRDYPKPVVSHDSASKECKRKLAEAYALNQKLNGQLTEED 511

Query: 426 -GEHKKNSRKKSEEEQNCKSQKQK 494
            G  K+  ++  ++E+    QKQK
Sbjct: 512 LGNLKRKLQQDQDQERKITRQKQK 535


>ref|NP_566520.1| (6-4)DNA photolyase [Arabidopsis thaliana]
           gi|306756349|sp|O48652.2|UVR3_ARATH RecName:
           Full=(6-4)DNA photolyase; AltName: Full=Protein UV
           repair defective 3 gi|332642182|gb|AEE75703.1| (6-4)DNA
           photolyase [Arabidopsis thaliana]
          Length = 556

 Score =  172 bits (436), Expect(2) = 1e-66
 Identities = 76/82 (92%), Positives = 78/82 (95%)
 Frame = +1

Query: 1   HSVACFLTRGDLLIHWERGRDVFERLLIDSDWAINNGNWMWLSCSSFFYQYNRIYSPISF 180
           H VACFLTRGDL IHWE+GRDVFERLLIDSDWAINNGNWMWLSCSSFFYQ+NRIYSPISF
Sbjct: 387 HCVACFLTRGDLFIHWEQGRDVFERLLIDSDWAINNGNWMWLSCSSFFYQFNRIYSPISF 446

Query: 181 GKKYDPKGNYIRHFLPVLKDMP 246
           GKKYDP G YIRHFLPVLKDMP
Sbjct: 447 GKKYDPDGKYIRHFLPVLKDMP 468



 Score =  105 bits (263), Expect(2) = 1e-66
 Identities = 51/87 (58%), Positives = 67/87 (77%), Gaps = 4/87 (4%)
 Frame = +3

Query: 249 RYIYAPWTAPLAVQTKANCIIGRDYPRPVVDHDIASKECKRKMGEAYALNRQSNGSVISG 428
           +YIY PWTAPL+VQTKANCI+G+DYP+P+V HD ASKECKRKMGEAYALN++ +G V   
Sbjct: 470 QYIYEPWTAPLSVQTKANCIVGKDYPKPMVLHDSASKECKRKMGEAYALNKKMDGKV-DE 528

Query: 429 EHKKNSRKK----SEEEQNCKSQKQKL 497
           E+ ++ R+K      EE   ++Q+ KL
Sbjct: 529 ENLRDLRRKLQKDEHEESKIRNQRPKL 555


>pdb|3FY4|A Chain A, (6-4) Photolyase Crystal Structure gi|228312125|pdb|3FY4|B
           Chain B, (6-4) Photolyase Crystal Structure
           gi|228312126|pdb|3FY4|C Chain C, (6-4) Photolyase
           Crystal Structure gi|2804280|dbj|BAA24449.1| 6-4
           photolyase [Arabidopsis thaliana]
           gi|3929918|dbj|BAA34711.1| 6-4 photolyase [Arabidopsis
           thaliana] gi|11994334|dbj|BAB02293.1| 6-4 photolyase
           [Arabidopsis thaliana]
          Length = 537

 Score =  172 bits (436), Expect(2) = 1e-66
 Identities = 76/82 (92%), Positives = 78/82 (95%)
 Frame = +1

Query: 1   HSVACFLTRGDLLIHWERGRDVFERLLIDSDWAINNGNWMWLSCSSFFYQYNRIYSPISF 180
           H VACFLTRGDL IHWE+GRDVFERLLIDSDWAINNGNWMWLSCSSFFYQ+NRIYSPISF
Sbjct: 368 HCVACFLTRGDLFIHWEQGRDVFERLLIDSDWAINNGNWMWLSCSSFFYQFNRIYSPISF 427

Query: 181 GKKYDPKGNYIRHFLPVLKDMP 246
           GKKYDP G YIRHFLPVLKDMP
Sbjct: 428 GKKYDPDGKYIRHFLPVLKDMP 449



 Score =  105 bits (263), Expect(2) = 1e-66
 Identities = 51/87 (58%), Positives = 67/87 (77%), Gaps = 4/87 (4%)
 Frame = +3

Query: 249 RYIYAPWTAPLAVQTKANCIIGRDYPRPVVDHDIASKECKRKMGEAYALNRQSNGSVISG 428
           +YIY PWTAPL+VQTKANCI+G+DYP+P+V HD ASKECKRKMGEAYALN++ +G V   
Sbjct: 451 QYIYEPWTAPLSVQTKANCIVGKDYPKPMVLHDSASKECKRKMGEAYALNKKMDGKV-DE 509

Query: 429 EHKKNSRKK----SEEEQNCKSQKQKL 497
           E+ ++ R+K      EE   ++Q+ KL
Sbjct: 510 ENLRDLRRKLQKDEHEESKIRNQRPKL 536


>ref|XP_002285327.2| PREDICTED: (6-4)DNA photolyase [Vitis vinifera]
          Length = 564

 Score =  175 bits (444), Expect(2) = 3e-66
 Identities = 75/84 (89%), Positives = 80/84 (95%)
 Frame = +1

Query: 1   HSVACFLTRGDLLIHWERGRDVFERLLIDSDWAINNGNWMWLSCSSFFYQYNRIYSPISF 180
           H VACFLTRGDL +HWE+GRDVFERLLIDSDWAINNGNW+WLSCSSFFYQYNRIYSPISF
Sbjct: 394 HCVACFLTRGDLFVHWEKGRDVFERLLIDSDWAINNGNWLWLSCSSFFYQYNRIYSPISF 453

Query: 181 GKKYDPKGNYIRHFLPVLKDMPAD 252
           GKKYDP GNYIRHFLP+LKDMP +
Sbjct: 454 GKKYDPNGNYIRHFLPILKDMPKE 477



 Score =  101 bits (252), Expect(2) = 3e-66
 Identities = 50/86 (58%), Positives = 61/86 (70%), Gaps = 3/86 (3%)
 Frame = +3

Query: 252 YIYAPWTAPLAVQTKANCIIGRDYPRPVVDHDIASKECKRKMGEAYALNRQSNGSVISGE 431
           YIY PWTAP ++Q KA CIIG+DYP+PVV HD A KECKRK+ EAYALN++ +GSV   +
Sbjct: 478 YIYEPWTAPPSIQAKAKCIIGKDYPKPVVCHDSAIKECKRKLAEAYALNKRLDGSVTEED 537

Query: 432 HKKNSRKKSEE---EQNCKSQKQKLI 500
            KK  RK  E+   E N    +QKLI
Sbjct: 538 LKKLRRKLEEDENPESNTSRTRQKLI 563


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