BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Papaver22_contig00032237
         (855 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_004147993.1| PREDICTED: DNA-directed RNA polymerase D sub...   282   8e-74
ref|XP_002275898.2| PREDICTED: LOW QUALITY PROTEIN: DNA-directed...   281   2e-73
emb|CBI34757.3| unnamed protein product [Vitis vinifera]              281   2e-73
ref|XP_002298071.1| RNA polymerase IV subunit [Populus trichocar...   266   6e-69
gb|AAY89360.1| RNA polymerase IV largest subunit [Solanum lycope...   262   8e-68

>ref|XP_004147993.1| PREDICTED: DNA-directed RNA polymerase D subunit 1-like [Cucumis
            sativus] gi|449494342|ref|XP_004159519.1| PREDICTED: LOW
            QUALITY PROTEIN: DNA-directed RNA polymerase D subunit
            1-like [Cucumis sativus]
          Length = 1469

 Score =  282 bits (721), Expect = 8e-74
 Identities = 145/277 (52%), Positives = 184/277 (66%), Gaps = 10/277 (3%)
 Frame = +1

Query: 43   LTEINIGAYQDVFRDVQRLVYHYASKENSMLAMVRSGSKGSLLKLVHQSLCLGLQHSSAP 222
            L + ++ A++ VFRD+Q LVY Y+ K+NS+L M ++GSKG+L+KLV  S+CLGLQHS   
Sbjct: 707  LNQASVDAFKKVFRDIQNLVYKYSGKDNSLLTMFKAGSKGNLMKLVQHSMCLGLQHSLVT 766

Query: 223  LSFRVPSMLSCSARNHSDF----------DTPGSHILYAVIENSFLSGLDPLECYVHSVS 372
            LSF +P  LSC+A N              D   S I YAV+ENSFLSGL+P EC+ HSV+
Sbjct: 767  LSFSLPHKLSCAAWNSQKMPRYIQKDGLPDRTQSFIPYAVVENSFLSGLNPFECFAHSVT 826

Query: 373  NRDSSFGENAEIPGTLFRKIMFYMRDLYLAYDGTVRNAYGNQLVQFCYGVSDKVTSTEDE 552
            NRDSSF +NAE+PGTL RK+ F MRD+Y AYDGTVRNAYGNQLVQFCY +    + +E E
Sbjct: 827  NRDSSFSDNAEVPGTLTRKLTFLMRDIYTAYDGTVRNAYGNQLVQFCYDIDRPTSESESE 886

Query: 553  ISCQISTGSDRRCGGEPVGSLAACSISEAAYSALDKPXXXXXXXXXXXXXXXXXXXXXXT 732
                 +   DR  GG PVGSLAAC+ISEAAYSALD+P                       
Sbjct: 887  -----NNNRDRGIGGHPVGSLAACAISEAAYSALDQPISLLEASPLLNLKRVLECGSKRN 941

Query: 733  AEVQNVTLFLSKKLKRLNYGSEYGAIAVKSHLEKVLF 843
            +  Q  +LFLS+KL + +YG EYGA+ VK+HLE+V+F
Sbjct: 942  STKQTFSLFLSEKLSKRSYGFEYGALGVKNHLERVMF 978


>ref|XP_002275898.2| PREDICTED: LOW QUALITY PROTEIN: DNA-directed RNA polymerase D subunit
            1-like [Vitis vinifera]
          Length = 1560

 Score =  281 bits (718), Expect = 2e-73
 Identities = 147/280 (52%), Positives = 195/280 (69%), Gaps = 13/280 (4%)
 Frame = +1

Query: 43   LTEINIGAYQDVFRDVQRLVYHYASKENSMLAMVRSGSKGSLLKLVHQSLCLGLQHSSAP 222
            L + ++ A++  FRD+Q LVY YA+K+NS+LAM+++GSKG+LLKLV Q LCLGLQHS  P
Sbjct: 729  LCQSSVCAFKQKFRDIQNLVYQYANKDNSLLAMLKAGSKGNLLKLVQQGLCLGLQHSLVP 788

Query: 223  LSFRVPSMLSCSARNHSDFDTPG-----------SHILYAVIENSFLSGLDPLECYVHSV 369
            LSF++P  LSC+A N      PG           S+I YAV+ENSFL GL+PLEC+VHSV
Sbjct: 789  LSFKIPHQLSCAAWNKQK--VPGLIQNDTSEYAESYIPYAVVENSFLMGLNPLECFVHSV 846

Query: 370  SNRDSSFGENAEIPGTLFRKIMFYMRDLYLAYDGTVRNAYGNQLVQFCYGVSDKVTSTE- 546
            ++RDSSF +NA++PGTL R++MF+MRDLY+AYDGTVRNAYGNQLVQF Y +    T ++ 
Sbjct: 847  TSRDSSFSDNADLPGTLTRRLMFFMRDLYIAYDGTVRNAYGNQLVQFSYNIEHTSTPSDG 906

Query: 547  -DEISCQISTGSDRRCGGEPVGSLAACSISEAAYSALDKPXXXXXXXXXXXXXXXXXXXX 723
             +E +C          GG+PVGS++AC+ISEAAYSALD+P                    
Sbjct: 907  INEDTCAYD------MGGQPVGSISACAISEAAYSALDQPISLLEPSPLLNLKRVLECGL 960

Query: 724  XXTAEVQNVTLFLSKKLKRLNYGSEYGAIAVKSHLEKVLF 843
              +   + V+LFLSKKL++  +G EYGA+ VK+HLEK+LF
Sbjct: 961  RKSTADRTVSLFLSKKLEKRKHGFEYGALEVKNHLEKLLF 1000


>emb|CBI34757.3| unnamed protein product [Vitis vinifera]
          Length = 1359

 Score =  281 bits (718), Expect = 2e-73
 Identities = 147/280 (52%), Positives = 195/280 (69%), Gaps = 13/280 (4%)
 Frame = +1

Query: 43   LTEINIGAYQDVFRDVQRLVYHYASKENSMLAMVRSGSKGSLLKLVHQSLCLGLQHSSAP 222
            L + ++ A++  FRD+Q LVY YA+K+NS+LAM+++GSKG+LLKLV Q LCLGLQHS  P
Sbjct: 598  LCQSSVCAFKQKFRDIQNLVYQYANKDNSLLAMLKAGSKGNLLKLVQQGLCLGLQHSLVP 657

Query: 223  LSFRVPSMLSCSARNHSDFDTPG-----------SHILYAVIENSFLSGLDPLECYVHSV 369
            LSF++P  LSC+A N      PG           S+I YAV+ENSFL GL+PLEC+VHSV
Sbjct: 658  LSFKIPHQLSCAAWNKQK--VPGLIQNDTSEYAESYIPYAVVENSFLMGLNPLECFVHSV 715

Query: 370  SNRDSSFGENAEIPGTLFRKIMFYMRDLYLAYDGTVRNAYGNQLVQFCYGVSDKVTSTE- 546
            ++RDSSF +NA++PGTL R++MF+MRDLY+AYDGTVRNAYGNQLVQF Y +    T ++ 
Sbjct: 716  TSRDSSFSDNADLPGTLTRRLMFFMRDLYIAYDGTVRNAYGNQLVQFSYNIEHTSTPSDG 775

Query: 547  -DEISCQISTGSDRRCGGEPVGSLAACSISEAAYSALDKPXXXXXXXXXXXXXXXXXXXX 723
             +E +C          GG+PVGS++AC+ISEAAYSALD+P                    
Sbjct: 776  INEDTCAYD------MGGQPVGSISACAISEAAYSALDQPISLLEPSPLLNLKRVLECGL 829

Query: 724  XXTAEVQNVTLFLSKKLKRLNYGSEYGAIAVKSHLEKVLF 843
              +   + V+LFLSKKL++  +G EYGA+ VK+HLEK+LF
Sbjct: 830  RKSTADRTVSLFLSKKLEKRKHGFEYGALEVKNHLEKLLF 869


>ref|XP_002298071.1| RNA polymerase IV subunit [Populus trichocarpa]
            gi|222845329|gb|EEE82876.1| RNA polymerase IV subunit
            [Populus trichocarpa]
          Length = 1517

 Score =  266 bits (679), Expect = 6e-69
 Identities = 142/276 (51%), Positives = 190/276 (68%), Gaps = 5/276 (1%)
 Frame = +1

Query: 31   RLCDLTEINIGAYQDVFRDVQRLVYHYASKENSMLAMVRSGSKGSLLKLVHQSLCLGLQH 210
            R   L++ ++ A++ VFRD+Q LVY YAS++NS LAM ++GSKG+LLKLV  S+CLGLQH
Sbjct: 746  RSAALSQSSVDAFRLVFRDIQSLVYKYASQDNSFLAMFKAGSKGNLLKLVQHSMCLGLQH 805

Query: 211  SSAPLSFRVPSMLSCSARNHSDFD----TPGSHILYAVIENSFLSGLDPLECYVHSVSNR 378
            + A LSFR+P  LSC+  N    D    +   +I +AV+E SFLSGL+P+EC+VHSV++R
Sbjct: 806  ALASLSFRIPHQLSCAGWNKQKADDATESAKRYIPHAVVEGSFLSGLNPIECFVHSVTSR 865

Query: 379  DSSFGENAEIPGTLFRKIMFYMRDLYLAYDGTVRNAYGNQLVQFCYGVSDKVTS-TEDEI 555
            DSSF +NA++PGTLFR++MF+MRDL+ AYDGTVRNAYGNQLVQF Y + D   S + DEI
Sbjct: 866  DSSFSDNADLPGTLFRRMMFFMRDLHGAYDGTVRNAYGNQLVQFSYNIDDMDPSGSVDEI 925

Query: 556  SCQISTGSDRRCGGEPVGSLAACSISEAAYSALDKPXXXXXXXXXXXXXXXXXXXXXXTA 735
            +      +     G PVG LAAC+ISEAAYSALD+P                       +
Sbjct: 926  N------NSDGIAGRPVGPLAACAISEAAYSALDQPISLLEKSPLLNLKNVLECGLKRNS 979

Query: 736  EVQNVTLFLSKKLKRLNYGSEYGAIAVKSHLEKVLF 843
              Q ++LFLS+KL R  +G EY A+ V++HLE++LF
Sbjct: 980  AHQTMSLFLSEKLGRQRHGFEYAALEVQNHLERLLF 1015


>gb|AAY89360.1| RNA polymerase IV largest subunit [Solanum lycopersicum]
          Length = 1138

 Score =  262 bits (669), Expect = 8e-68
 Identities = 135/284 (47%), Positives = 190/284 (66%), Gaps = 11/284 (3%)
 Frame = +1

Query: 22   IDNRLCDLTEINIGAYQDVFRDVQRLVYHYASKENSMLAMVRSGSKGSLLKLVHQSLCLG 201
            +  +   L++ +  A++ VFRD+Q LVY+YAS +NS+LAM+++GSKG+LLKLV  ++CLG
Sbjct: 367  MQQKSASLSQASASAFKKVFRDIQNLVYNYASNDNSLLAMLKAGSKGNLLKLVQHNMCLG 426

Query: 202  LQHSSAPLSFRVPSMLSCSARN-----------HSDFDTPGSHILYAVIENSFLSGLDPL 348
            LQ S  P+SFR+P  LSC A N           H   + PGS+I  AV+++SFL+GL+PL
Sbjct: 427  LQQSLVPVSFRMPRQLSCDAWNNHKSHLVIEKPHKVPECPGSYIPSAVVKSSFLAGLNPL 486

Query: 349  ECYVHSVSNRDSSFGENAEIPGTLFRKIMFYMRDLYLAYDGTVRNAYGNQLVQFCYGVSD 528
            EC+VHS++ RDSSF  +A++ GTL RK+MF+MRDLY+ YDGTVRNAYGNQ+VQF Y  ++
Sbjct: 487  ECFVHSLTTRDSSFSGHADVSGTLNRKLMFFMRDLYVGYDGTVRNAYGNQIVQFSYYEAE 546

Query: 529  KVTSTEDEISCQISTGSDRRCGGEPVGSLAACSISEAAYSALDKPXXXXXXXXXXXXXXX 708
            ++ ST  +++ +     +   GG PVGSLAAC+ISEAAY ALD+P               
Sbjct: 547  QIAST--KVTGEALESHNHAIGGHPVGSLAACAISEAAYCALDQPVSALESSPLLNLKKI 604

Query: 709  XXXXXXXTAEVQNVTLFLSKKLKRLNYGSEYGAIAVKSHLEKVL 840
                       +  ++FLSK+L R  +G EYGA+ VK HLE++L
Sbjct: 605  LESGAGSRTGEKTASMFLSKRLGRWAHGFEYGALEVKGHLERLL 648