BLASTX nr result

ID: Papaver22_contig00032090 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Papaver22_contig00032090
         (655 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002301951.1| predicted protein [Populus trichocarpa] gi|2...   109   4e-22
ref|XP_002510592.1| ring finger protein, putative [Ricinus commu...   107   2e-21
ref|XP_002306953.1| predicted protein [Populus trichocarpa] gi|2...   107   3e-21
ref|XP_003527526.1| PREDICTED: E3 ubiquitin-protein ligase ATL23...   104   1e-20
ref|XP_003523302.1| PREDICTED: E3 ubiquitin-protein ligase ATL23...   102   8e-20

>ref|XP_002301951.1| predicted protein [Populus trichocarpa] gi|222843677|gb|EEE81224.1|
           predicted protein [Populus trichocarpa]
          Length = 165

 Score =  109 bits (273), Expect = 4e-22
 Identities = 50/92 (54%), Positives = 65/92 (70%), Gaps = 1/92 (1%)
 Frame = +2

Query: 182 LLWYATNGSVDNQD-DEKSSKMKGLSELELKELPVGKAMEEIKGTDCVICLDEIEVDQLI 358
           LLWYA N   +N     K+   KGLS  EL++LP     E + GT+C +CLD+IE +QL 
Sbjct: 58  LLWYAANNQPENIPLPVKTVTEKGLSSSELEKLPKVTGKELVLGTECAVCLDDIESEQLA 117

Query: 359 RLLPVCNHGFHLECADSWLSRNSVCPICRTKL 454
           R++P CNHGFHLECAD+WLS++ VCP+CR KL
Sbjct: 118 RIVPGCNHGFHLECADTWLSKHPVCPVCRAKL 149


>ref|XP_002510592.1| ring finger protein, putative [Ricinus communis]
           gi|223551293|gb|EEF52779.1| ring finger protein,
           putative [Ricinus communis]
          Length = 175

 Score =  107 bits (267), Expect = 2e-21
 Identities = 52/93 (55%), Positives = 64/93 (68%), Gaps = 2/93 (2%)
 Frame = +2

Query: 182 LLWYATNGSVDNQ--DDEKSSKMKGLSELELKELPVGKAMEEIKGTDCVICLDEIEVDQL 355
           LLWYA N    ++     K S  KGLS  +L++LP     E I GT+C +CLDEIE +Q 
Sbjct: 70  LLWYAANHHHHSEIVTPVKPSAEKGLSASDLEKLPKMTGKELILGTECAVCLDEIESEQP 129

Query: 356 IRLLPVCNHGFHLECADSWLSRNSVCPICRTKL 454
            RL+P CNHGFHLECAD+WLS +SVCP+CR KL
Sbjct: 130 ARLVPGCNHGFHLECADTWLSNHSVCPVCRAKL 162


>ref|XP_002306953.1| predicted protein [Populus trichocarpa] gi|222856402|gb|EEE93949.1|
           predicted protein [Populus trichocarpa]
          Length = 134

 Score =  107 bits (266), Expect = 3e-21
 Identities = 46/91 (50%), Positives = 63/91 (69%)
 Frame = +2

Query: 182 LLWYATNGSVDNQDDEKSSKMKGLSELELKELPVGKAMEEIKGTDCVICLDEIEVDQLIR 361
           LLWY  N   + +   K+   KGLS  EL++LP     E + GT+C +CLD+IE +Q+ R
Sbjct: 26  LLWYTANNQPEIRLPVKTVTEKGLSSSELEKLPKVTGKELVLGTECAVCLDDIESEQVAR 85

Query: 362 LLPVCNHGFHLECADSWLSRNSVCPICRTKL 454
           ++P CNHGFHLECAD+WL++  VCP+CR KL
Sbjct: 86  MVPGCNHGFHLECADTWLTKRPVCPVCRAKL 116


>ref|XP_003527526.1| PREDICTED: E3 ubiquitin-protein ligase ATL23-like [Glycine max]
          Length = 130

 Score =  104 bits (260), Expect = 1e-20
 Identities = 49/94 (52%), Positives = 65/94 (69%), Gaps = 3/94 (3%)
 Frame = +2

Query: 182 LLWYATNGSVDNQDDEKSSKM---KGLSELELKELPVGKAMEEIKGTDCVICLDEIEVDQ 352
           LLWYAT        D +  K    KGLS LEL++LP     E + GT+C +CLDEIE +Q
Sbjct: 26  LLWYATTRRNQPPIDGQPVKPVTDKGLSALELEKLPKITGKELVLGTECAVCLDEIESEQ 85

Query: 353 LIRLLPVCNHGFHLECADSWLSRNSVCPICRTKL 454
             R++P CNHGFH++CAD+WLS++ +CP+CRTKL
Sbjct: 86  PARVVPGCNHGFHVQCADTWLSKHPICPVCRTKL 119


>ref|XP_003523302.1| PREDICTED: E3 ubiquitin-protein ligase ATL23-like [Glycine max]
          Length = 131

 Score =  102 bits (253), Expect = 8e-20
 Identities = 50/96 (52%), Positives = 64/96 (66%), Gaps = 5/96 (5%)
 Frame = +2

Query: 182 LLWYATNGS-----VDNQDDEKSSKMKGLSELELKELPVGKAMEEIKGTDCVICLDEIEV 346
           LLWYAT        +D Q   K    KGLS LEL++LP     E + G +C +CLDEIE 
Sbjct: 26  LLWYATTRHHQQPPIDGQP-VKPVADKGLSALELEKLPRVTGKELVLGNECAVCLDEIES 84

Query: 347 DQLIRLLPVCNHGFHLECADSWLSRNSVCPICRTKL 454
           +Q  RL+P CNHGFH+ CAD+WLS++ +CP+CRTKL
Sbjct: 85  EQPARLVPGCNHGFHVHCADTWLSKHPLCPVCRTKL 120


Top