BLASTX nr result

ID: Papaver22_contig00032041 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Papaver22_contig00032041
         (528 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002524560.1| RNA binding protein, putative [Ricinus commu...   119   4e-25
ref|XP_003601310.1| Splicing factor, arginine/serine-rich [Medic...   117   8e-25
emb|CBI28491.3| unnamed protein product [Vitis vinifera]              117   1e-24
ref|XP_002266343.1| PREDICTED: uncharacterized protein LOC100249...   117   1e-24
gb|AAT41832.1| At4g12630 [Arabidopsis thaliana]                       117   1e-24

>ref|XP_002524560.1| RNA binding protein, putative [Ricinus communis]
           gi|223536113|gb|EEF37768.1| RNA binding protein,
           putative [Ricinus communis]
          Length = 929

 Score =  119 bits (297), Expect = 4e-25
 Identities = 53/95 (55%), Positives = 74/95 (77%)
 Frame = +1

Query: 145 HYSRSTEKSHSGRTSINAPSPSRRLWVGNLSHHVTETELSEQFLRFGEVESIAFHPGRSY 324
           +YSR  + + S     ++  PSR LWVGNLSH + E +L++ F+RFGE++S+AF PGRSY
Sbjct: 30  NYSRFEDSNSSSNKRSSSNPPSRHLWVGNLSHSIMENDLTDHFVRFGELDSVAFQPGRSY 89

Query: 325 AFVNFMNDEDALIAVTALQGFVLAGSPIKIEFAKA 429
           AF+NF ND++A+ A+ ALQGF LAG+P++IEFAKA
Sbjct: 90  AFINFKNDDEAIAALKALQGFPLAGNPLRIEFAKA 124


>ref|XP_003601310.1| Splicing factor, arginine/serine-rich [Medicago truncatula]
           gi|355490358|gb|AES71561.1| Splicing factor,
           arginine/serine-rich [Medicago truncatula]
          Length = 180

 Score =  117 bits (294), Expect = 8e-25
 Identities = 54/86 (62%), Positives = 69/86 (80%)
 Frame = +1

Query: 205 PSRRLWVGNLSHHVTETELSEQFLRFGEVESIAFHPGRSYAFVNFMNDEDALIAVTALQG 384
           PSR LWVGNLSH++ E EL+  F+RFG +E +AF PGRSYAF+NF  DEDA+ A+ +LQG
Sbjct: 41  PSRHLWVGNLSHNIVEDELAHPFIRFGPLEKVAFQPGRSYAFINFEVDEDAIDAMRSLQG 100

Query: 385 FVLAGSPIKIEFAKAVSCVNLNLYTN 462
           F+LAG+P++IEFAKAVS   L L+ N
Sbjct: 101 FLLAGNPLRIEFAKAVSVAKLILFVN 126


>emb|CBI28491.3| unnamed protein product [Vitis vinifera]
          Length = 1054

 Score =  117 bits (293), Expect = 1e-24
 Identities = 56/92 (60%), Positives = 73/92 (79%)
 Frame = +1

Query: 154 RSTEKSHSGRTSINAPSPSRRLWVGNLSHHVTETELSEQFLRFGEVESIAFHPGRSYAFV 333
           R  EKSHSGR+S     PSR LWVGNLSH ++E  L++ FL+FGE++++AF PGRSYAF+
Sbjct: 409 RFEEKSHSGRSS---HPPSRHLWVGNLSHSISENTLTDPFLQFGELDTVAFQPGRSYAFI 465

Query: 334 NFMNDEDALIAVTALQGFVLAGSPIKIEFAKA 429
           NF  +EDA+ A+ +LQGF +AG P+KIEFAKA
Sbjct: 466 NFKQEEDAIHAMRSLQGFSVAGMPLKIEFAKA 497


>ref|XP_002266343.1| PREDICTED: uncharacterized protein LOC100249524 [Vitis vinifera]
          Length = 953

 Score =  117 bits (293), Expect = 1e-24
 Identities = 56/92 (60%), Positives = 73/92 (79%)
 Frame = +1

Query: 154 RSTEKSHSGRTSINAPSPSRRLWVGNLSHHVTETELSEQFLRFGEVESIAFHPGRSYAFV 333
           R  EKSHSGR+S     PSR LWVGNLSH ++E  L++ FL+FGE++++AF PGRSYAF+
Sbjct: 38  RFEEKSHSGRSS---HPPSRHLWVGNLSHSISENTLTDPFLQFGELDTVAFQPGRSYAFI 94

Query: 334 NFMNDEDALIAVTALQGFVLAGSPIKIEFAKA 429
           NF  +EDA+ A+ +LQGF +AG P+KIEFAKA
Sbjct: 95  NFKQEEDAIHAMRSLQGFSVAGMPLKIEFAKA 126


>gb|AAT41832.1| At4g12630 [Arabidopsis thaliana]
          Length = 117

 Score =  117 bits (292), Expect = 1e-24
 Identities = 57/98 (58%), Positives = 71/98 (72%)
 Frame = +1

Query: 151 SRSTEKSHSGRTSINAPSPSRRLWVGNLSHHVTETELSEQFLRFGEVESIAFHPGRSYAF 330
           SR  E+            PSR LWVGNL H + E EL+++FLRFGE+ES+AF PGRSYAF
Sbjct: 3   SRGRERMMMKEDGRGRNPPSRHLWVGNLPHGILERELADRFLRFGELESLAFQPGRSYAF 62

Query: 331 VNFMNDEDALIAVTALQGFVLAGSPIKIEFAKAVSCVN 444
           VNF +DEDA  A+ +LQGF L+G+P++IEFAKAVS  N
Sbjct: 63  VNFNHDEDAFAAIESLQGFPLSGNPLRIEFAKAVSVEN 100


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