BLASTX nr result

ID: Papaver22_contig00030683 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Papaver22_contig00030683
         (566 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002512262.1| Pre-rRNA-processing protein TSR2, putative [...    64   2e-08
gb|AAS79569.1| hypothetical protein [Ipomoea trifida] gi|1171659...    59   4e-07
ref|XP_004136275.1| PREDICTED: pre-rRNA-processing protein TSR2 ...    57   3e-06
ref|XP_002319614.1| predicted protein [Populus trichocarpa] gi|2...    57   3e-06

>ref|XP_002512262.1| Pre-rRNA-processing protein TSR2, putative [Ricinus communis]
           gi|223548223|gb|EEF49714.1| Pre-rRNA-processing protein
           TSR2, putative [Ricinus communis]
          Length = 213

 Score = 63.5 bits (153), Expect = 2e-08
 Identities = 46/161 (28%), Positives = 77/161 (47%)
 Frame = -2

Query: 499 LPPECVPLFADGISLILFRWVKLQMAVARSCNRWIGVAEYLRLTCGKVKHEAVEKMAADI 320
           LPPE VPLF +GI LIL RW  LQ+AV    N W           G+   +  +++  DI
Sbjct: 19  LPPESVPLFQEGIFLILSRWSALQLAVE---NEW----------GGRGSRQLADQIGFDI 65

Query: 319 LAFFLQPEEHCHACIIQKANNKAEEPCNVDHVQYLLGELFRISFSHSAVGPSSLIEVGNK 140
            ++F Q                ++EP  +D ++ +L E   +   ++ +   S+ EV  K
Sbjct: 66  FSWFTQ----------------SKEPLYIDDLENILDE--GMISLNTMIEDGSVEEVAEK 107

Query: 139 LFNLHQDLLQGKYDSVEKLGKTLTWIGEDQLERLRKSEDEE 17
           L  +H++ L+G Y ++E+L +     G  Q  R   + D++
Sbjct: 108 LMIMHEECLEGNYHTIEQLRQARPTAGVHQHIRQAANGDDD 148


>gb|AAS79569.1| hypothetical protein [Ipomoea trifida] gi|117165980|dbj|BAF36282.1|
           hypothetical protein [Ipomoea trifida]
          Length = 201

 Score = 59.3 bits (142), Expect = 4e-07
 Identities = 41/151 (27%), Positives = 72/151 (47%)
 Frame = -2

Query: 469 DGISLILFRWVKLQMAVARSCNRWIGVAEYLRLTCGKVKHEAVEKMAADILAFFLQPEEH 290
           +GI+L+L RW  LQMAVA   N W           G+  H+  ++++  I +FF Q +E 
Sbjct: 21  EGINLVLSRWASLQMAVA---NEW----------GGRGSHQKSQELSERIFSFFTQSKEQ 67

Query: 289 CHACIIQKANNKAEEPCNVDHVQYLLGELFRISFSHSAVGPSSLIEVGNKLFNLHQDLLQ 110
            +                +D ++ +L E F +S  ++ VG  S+ EV  K+  +H+   +
Sbjct: 68  VY----------------IDDLEEILDE-FMLSDFNTEVGDGSIEEVAEKMMIMHEQCTE 110

Query: 109 GKYDSVEKLGKTLTWIGEDQLERLRKSEDEE 17
           G ++S+ +L +T          R   S+DE+
Sbjct: 111 GNFESINELKRTNPGNSAVTYSRQAASDDED 141


>ref|XP_004136275.1| PREDICTED: pre-rRNA-processing protein TSR2 homolog [Cucumis
           sativus] gi|449496991|ref|XP_004160283.1| PREDICTED:
           pre-rRNA-processing protein TSR2 homolog [Cucumis
           sativus]
          Length = 193

 Score = 56.6 bits (135), Expect = 3e-06
 Identities = 41/140 (29%), Positives = 65/140 (46%)
 Frame = -2

Query: 502 VLPPECVPLFADGISLILFRWVKLQMAVARSCNRWIGVAEYLRLTCGKVKHEAVEKMAAD 323
           +LP    PLF +GI L+L RW  LQ+AV    N W           G+     VE + A+
Sbjct: 8   LLPAHAFPLFQEGIGLVLSRWSALQLAVE---NEW----------GGRDSRRKVELLCAE 54

Query: 322 ILAFFLQPEEHCHACIIQKANNKAEEPCNVDHVQYLLGELFRISFSHSAVGPSSLIEVGN 143
           I  +F Q +E  +                +D ++ +L E   +S S + V   S+ EV  
Sbjct: 55  IFTWFTQNKEQLY----------------IDDLEIILDEAM-LSLS-TQVDDGSIEEVAE 96

Query: 142 KLFNLHQDLLQGKYDSVEKL 83
           KL  +H++ + G + S+E+L
Sbjct: 97  KLIIMHEECVDGNFSSIERL 116


>ref|XP_002319614.1| predicted protein [Populus trichocarpa] gi|222857990|gb|EEE95537.1|
           predicted protein [Populus trichocarpa]
          Length = 212

 Score = 56.6 bits (135), Expect = 3e-06
 Identities = 43/163 (26%), Positives = 77/163 (47%)
 Frame = -2

Query: 499 LPPECVPLFADGISLILFRWVKLQMAVARSCNRWIGVAEYLRLTCGKVKHEAVEKMAADI 320
           L  + +  F +GI LIL +W  LQ+AV    N W           G+  H   E++A+DI
Sbjct: 21  LTADSISQFREGIRLILSKWSALQLAVE---NEW----------GGRGSHLLAEQLASDI 67

Query: 319 LAFFLQPEEHCHACIIQKANNKAEEPCNVDHVQYLLGELFRISFSHSAVGPSSLIEVGNK 140
            ++F Q                ++EP  +D ++ ++ E   +S + + +   S+ EV  K
Sbjct: 68  FSWFTQ----------------SKEPLYIDDLESIMDEAM-LSLN-TMIEDGSVEEVAEK 109

Query: 139 LFNLHQDLLQGKYDSVEKLGKTLTWIGEDQLERLRKSEDEELE 11
           L  +H++ L+G Y S++KL      +G  Q  +    +D++ E
Sbjct: 110 LMIMHEECLEGNYSSIQKLRDEGPRMGAHQHVKQAVEDDDDSE 152


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