BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Papaver22_contig00028826
         (449 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|ABQ45352.1| RNA-dependent RNA polymerase [Gossypium hirsutum]      128   4e-28
gb|AAN64409.1| RNA-dependent RNA polymerase 1 [Arabidopsis thali...   125   3e-27
ref|NP_172932.1| RNA-dependent RNA polymerase 1 [Arabidopsis tha...   125   3e-27
emb|CCD74482.1| RNA-dependent RNA polymerase 1 [Arabidopsis hall...   125   4e-27
ref|XP_004146426.1| PREDICTED: RNA-dependent RNA polymerase 1-li...   124   6e-27

>gb|ABQ45352.1| RNA-dependent RNA polymerase [Gossypium hirsutum]
          Length = 1110

 Score =  128 bits (322), Expect = 4e-28
 Identities = 70/143 (48%), Positives = 96/143 (67%)
 Frame = +2

Query: 5   MGRTIHIYGFPAYVTAELIKDFLEDYTGKGTVYALQVTIPKNKGPNPRAYADIQFTTTQN 184
           MG+TI +YGF + V+A  +K FLE YTG+ TVYAL++   K  G   RA+A +QFT + +
Sbjct: 1   MGKTIQVYGFLSDVSAGEVKTFLEGYTGRETVYALKIRQHKKSG---RAFAIVQFTRSSD 57

Query: 185 ADYMSLLINRPQRLYYGTSYLKVFDRDRIFIPKPRVSMFHLKVPTLHFGCQVSNDCFYTL 364
           A  +  L N  QRLYYG SYLK  + +   +PKPRV +  ++  T++FGCQVS + FY L
Sbjct: 58  AGLIIRLAN--QRLYYGRSYLKAREMETDIVPKPRVFLHTMERVTVNFGCQVSEEKFYVL 115

Query: 365 CKTKDVSVDFGFGFRKLCFLLSY 433
            K  +V+++FG G RKL FLLSY
Sbjct: 116 WKADNVTLNFGTGMRKLEFLLSY 138


>gb|AAN64409.1| RNA-dependent RNA polymerase 1 [Arabidopsis thaliana]
          Length = 1107

 Score =  125 bits (315), Expect = 3e-27
 Identities = 67/143 (46%), Positives = 90/143 (62%)
 Frame = +2

Query: 5   MGRTIHIYGFPAYVTAELIKDFLEDYTGKGTVYALQVTIPKNKGPNPRAYADIQFTTTQN 184
           MG+TI ++GFP  V+AE +K FLE  TG GTVYA++V  PK  GP  R YA +QFT+ ++
Sbjct: 1   MGKTIQVFGFPNGVSAEEVKKFLERLTGSGTVYAIKVRQPKKGGP--RVYAIVQFTSERH 58

Query: 185 ADYMSLLINRPQRLYYGTSYLKVFDRDRIFIPKPRVSMFHLKVPTLHFGCQVSNDCFYTL 364
                ++    +RLYYG SYLK F+ ++  +PKPR S+  +    + FGCQVS   F TL
Sbjct: 59  TRL--IITAAAERLYYGRSYLKAFEVEQDIVPKPRASLHTISGLKMFFGCQVSTKKFLTL 116

Query: 365 CKTKDVSVDFGFGFRKLCFLLSY 433
              +DV V FG G RKL F  S+
Sbjct: 117 WSAQDVCVSFGIGMRKLHFSFSW 139


>ref|NP_172932.1| RNA-dependent RNA polymerase 1 [Arabidopsis thaliana]
           gi|75335341|sp|Q9LQV2.1|RDR1_ARATH RecName:
           Full=RNA-dependent RNA polymerase 1; Short=AtRDRP1;
           AltName: Full=RNA-directed RNA polymerase 1
           gi|8778232|gb|AAF79241.1|AC006917_26 F10B6.19
           [Arabidopsis thaliana] gi|110737376|dbj|BAF00633.1|
           putative RNA-directed RNA polymerase [Arabidopsis
           thaliana] gi|332191105|gb|AEE29226.1| RNA-dependent RNA
           polymerase 1 [Arabidopsis thaliana]
          Length = 1107

 Score =  125 bits (315), Expect = 3e-27
 Identities = 67/143 (46%), Positives = 90/143 (62%)
 Frame = +2

Query: 5   MGRTIHIYGFPAYVTAELIKDFLEDYTGKGTVYALQVTIPKNKGPNPRAYADIQFTTTQN 184
           MG+TI ++GFP  V+AE +K FLE  TG GTVYA++V  PK  GP  R YA +QFT+ ++
Sbjct: 1   MGKTIQVFGFPNGVSAEEVKKFLERLTGSGTVYAIKVRQPKKGGP--RVYAIVQFTSERH 58

Query: 185 ADYMSLLINRPQRLYYGTSYLKVFDRDRIFIPKPRVSMFHLKVPTLHFGCQVSNDCFYTL 364
                ++    +RLYYG SYLK F+ ++  +PKPR S+  +    + FGCQVS   F TL
Sbjct: 59  TRL--IITAAAERLYYGRSYLKAFEVEQDIVPKPRASLHTISGLKMFFGCQVSTKKFLTL 116

Query: 365 CKTKDVSVDFGFGFRKLCFLLSY 433
              +DV V FG G RKL F  S+
Sbjct: 117 WSAQDVCVSFGIGMRKLHFSFSW 139


>emb|CCD74482.1| RNA-dependent RNA polymerase 1 [Arabidopsis halleri subsp. halleri]
          Length = 1107

 Score =  125 bits (314), Expect = 4e-27
 Identities = 69/145 (47%), Positives = 90/145 (62%), Gaps = 2/145 (1%)
 Frame = +2

Query: 5   MGRTIHIYGFPAYVTAELIKDFLEDYTGKGTVYALQVTIPKNKGPNPRAYADIQFTTTQN 184
           MG+TI ++GFP  V+AE +K FLE  TG GTVYA++V  PK  GP  R +A +QFT   N
Sbjct: 1   MGKTIQVFGFPNGVSAEEVKKFLERLTGSGTVYAIKVRQPKKGGP--RVFAIVQFT---N 55

Query: 185 ADYMSLLIN--RPQRLYYGTSYLKVFDRDRIFIPKPRVSMFHLKVPTLHFGCQVSNDCFY 358
             Y   +I     +RLYYG SYL  F+ D+  +PKPR S+ ++    ++FGCQVS   F 
Sbjct: 56  ERYARQIITGAAERRLYYGRSYLNAFEVDQDIVPKPRASLHNISGLKMYFGCQVSTQKFL 115

Query: 359 TLCKTKDVSVDFGFGFRKLCFLLSY 433
           TL   +DV V FG G RKL F  S+
Sbjct: 116 TLWSAQDVCVSFGIGMRKLHFSFSW 140


>ref|XP_004146426.1| PREDICTED: RNA-dependent RNA polymerase 1-like [Cucumis sativus]
           gi|449491619|ref|XP_004158954.1| PREDICTED:
           RNA-dependent RNA polymerase 1-like [Cucumis sativus]
           gi|316989899|gb|ADU77015.1| RNA-dependent RNA polymerase
           1a [Cucumis sativus]
          Length = 1130

 Score =  124 bits (312), Expect = 6e-27
 Identities = 70/144 (48%), Positives = 92/144 (63%)
 Frame = +2

Query: 5   MGRTIHIYGFPAYVTAELIKDFLEDYTGKGTVYALQVTIPKNKGPNPRAYADIQFTTTQN 184
           MG+TIHI GFP++VTA+ +K+FLE +TG GTVYA++V  PK  G   R YA +QFT+   
Sbjct: 1   MGKTIHISGFPSHVTADAVKNFLEGHTGPGTVYAIKVRPPKRGGG--RLYAIVQFTSATQ 58

Query: 185 ADYMSLLINRPQRLYYGTSYLKVFDRDRIFIPKPRVSMFHLKVPTLHFGCQVSNDCFYTL 364
           A+ +  L N  QRL+YG+SYLK    +   +PKPR  M+ L+   L FGCQVS + F  L
Sbjct: 59  AELIISLAN--QRLWYGSSYLKARATEVDIVPKPRTYMYTLEELLLCFGCQVSTEKFRVL 116

Query: 365 CKTKDVSVDFGFGFRKLCFLLSYK 436
            +     V FG G RK+ F L YK
Sbjct: 117 WEGNVDLVTFGIGMRKMNFHLKYK 140