BLASTX nr result

ID: Papaver22_contig00028767 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Papaver22_contig00028767
         (556 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002525350.1| DNA binding protein, putative [Ricinus commu...    89   2e-22
ref|XP_002517349.1| DNA binding protein, putative [Ricinus commu...    99   4e-21
ref|XP_002274643.2| PREDICTED: methyl-CpG-binding domain-contain...    96   4e-20
ref|XP_002264500.2| PREDICTED: methyl-CpG-binding domain-contain...    96   5e-18
emb|CBI32139.3| unnamed protein product [Vitis vinifera]               96   5e-18

>ref|XP_002525350.1| DNA binding protein, putative [Ricinus communis]
            gi|223535313|gb|EEF36988.1| DNA binding protein, putative
            [Ricinus communis]
          Length = 1794

 Score = 88.6 bits (218), Expect(2) = 2e-22
 Identities = 48/98 (48%), Positives = 58/98 (59%), Gaps = 1/98 (1%)
 Frame = -1

Query: 493  PIGNWYCPTCFKSSEVMAPPDTHVIHHGIRKRYQGEGTHIFSETLNNLAAVIEEKESWDC 314
            P GNWYCP+C        P     + H  +KR QGE TH   E L +L   +E  + WD 
Sbjct: 954  PEGNWYCPSCITQGASQVP---QFVSHCRKKRRQGEFTHGVLEALAHLGTTMEITDYWDY 1010

Query: 313  ILEERVFLL-ILCDE*LNSIVCREHLDQCAEMSADVQQ 203
             +EER+FLL  L DE LNS   REHLDQCA +SAD+QQ
Sbjct: 1011 SVEERIFLLKFLGDEVLNSANIREHLDQCASVSADLQQ 1048



 Score = 42.0 bits (97), Expect(2) = 2e-22
 Identities = 22/50 (44%), Positives = 32/50 (64%)
 Frame = -3

Query: 200  LHSFSVELRNLKYKVEVITEESRVMLNGVGEAGKAAAVSMLVNRSRVIGQ 51
            L S S+E RNLK+K E+       MLNGVG++GK    ++L N  +++GQ
Sbjct: 1050 LRSLSMEWRNLKFKEEL-------MLNGVGKSGKEGTTTVLPNYDKLLGQ 1092


>ref|XP_002517349.1| DNA binding protein, putative [Ricinus communis]
            gi|223543360|gb|EEF44891.1| DNA binding protein, putative
            [Ricinus communis]
          Length = 2145

 Score = 99.0 bits (245), Expect(2) = 4e-21
 Identities = 52/99 (52%), Positives = 66/99 (66%), Gaps = 2/99 (2%)
 Frame = -1

Query: 493  PIGNWYCPTCFKSSEVM-APPDTHVIHHGIRKRYQGEGTHIFSETLNNLAAVIEEKESWD 317
            P GNWYCP+C     V  A   T VI     K+YQGE T I+ ETL +LA+ +EEK+ WD
Sbjct: 1258 PEGNWYCPSCVSVRMVQEASVSTQVIGQNSCKKYQGEMTRIYLETLVHLASAMEEKDYWD 1317

Query: 316  CILEERVFLL-ILCDE*LNSIVCREHLDQCAEMSADVQQ 203
              ++ER FLL  LCDE LNS + R+HL+QC E +A+VQQ
Sbjct: 1318 FGVDERTFLLKFLCDELLNSALVRQHLEQCMESTAEVQQ 1356



 Score = 27.3 bits (59), Expect(2) = 4e-21
 Identities = 17/56 (30%), Positives = 26/56 (46%)
 Frame = -3

Query: 200  LHSFSVELRNLKYKVEVITEESRVMLNGVGEAGKAAAVSMLVNRSRVIGQHQTLNN 33
            L +   E +NLK K E +  +S  M  G     K   VS L ++ + +GQ   L +
Sbjct: 1358 LRTLYAEWKNLKSKEEFMALKSAKMGTGASGEVKEGLVSALKDQGKSVGQPPVLGD 1413


>ref|XP_002274643.2| PREDICTED: methyl-CpG-binding domain-containing protein 9-like [Vitis
            vinifera]
          Length = 2164

 Score = 95.5 bits (236), Expect(2) = 4e-20
 Identities = 49/99 (49%), Positives = 65/99 (65%), Gaps = 2/99 (2%)
 Frame = -1

Query: 493  PIGNWYCPTCFKS-SEVMAPPDTHVIHHGIRKRYQGEGTHIFSETLNNLAAVIEEKESWD 317
            P GNWYCP+C    S V     THVI     K  QG+ TH + E+L +LAA +EEKE W+
Sbjct: 1256 PEGNWYCPSCVAGISMVDVSEHTHVIAQRQGKNCQGDFTHAYLESLAHLAAAMEEKEYWE 1315

Query: 316  CILEERVFLL-ILCDE*LNSIVCREHLDQCAEMSADVQQ 203
              +++R FL   LCDE LN+ + R+HL+QCAE SA++QQ
Sbjct: 1316 LSVDQRTFLFKFLCDELLNTALIRQHLEQCAESSAELQQ 1354



 Score = 27.7 bits (60), Expect(2) = 4e-20
 Identities = 20/61 (32%), Positives = 31/61 (50%), Gaps = 5/61 (8%)
 Frame = -3

Query: 200  LHSFSVELRNLKYKVEVITEESRVMLNGV----GEAGKAAAV-SMLVNRSRVIGQHQTLN 36
            L S SVE +NLK K E +   +  + +G+    GE G    + S L N  + I +  TL+
Sbjct: 1356 LRSISVEWKNLKLKEENLAARAPKVDSGMIYVAGEVGTEGGLSSALTNNGKCIAKPHTLS 1415

Query: 35   N 33
            +
Sbjct: 1416 D 1416


>ref|XP_002264500.2| PREDICTED: methyl-CpG-binding domain-containing protein 9-like [Vitis
            vinifera]
          Length = 2060

 Score = 95.5 bits (236), Expect = 5e-18
 Identities = 58/150 (38%), Positives = 76/150 (50%), Gaps = 34/150 (22%)
 Frame = -1

Query: 550  CGKEILKAP*EDDSVCRLC-------------------------------PIGNWYCPTC 464
            C  EI KAP  D+ +C++C                               P GNWYCP+C
Sbjct: 1029 CADEIPKAP-WDEGLCKVCGVDKDDDNVLLCDACDSEYHTYCLNPPLARIPEGNWYCPSC 1087

Query: 463  FKSSEVM--APPDTHVIHHGIRKRYQGEGTHIFSETLNNLAAVIEEKESWDCILEERVFL 290
              +  +         V     RKRYQGE T  + ETL +LA ++E KE  +  +EERVFL
Sbjct: 1088 VAAQRLSQGTSRSAEVFSRCRRKRYQGEFTRTYLETLTHLATIMEIKEYCELSIEERVFL 1147

Query: 289  L-ILCDE*LNSIVCREHLDQCAEMSADVQQ 203
            L   C+E LNS + REHL+QCA +SAD+QQ
Sbjct: 1148 LKFFCEEVLNSAIIREHLEQCASLSADLQQ 1177


>emb|CBI32139.3| unnamed protein product [Vitis vinifera]
          Length = 1789

 Score = 95.5 bits (236), Expect = 5e-18
 Identities = 58/150 (38%), Positives = 76/150 (50%), Gaps = 34/150 (22%)
 Frame = -1

Query: 550  CGKEILKAP*EDDSVCRLC-------------------------------PIGNWYCPTC 464
            C  EI KAP  D+ +C++C                               P GNWYCP+C
Sbjct: 926  CADEIPKAP-WDEGLCKVCGVDKDDDNVLLCDACDSEYHTYCLNPPLARIPEGNWYCPSC 984

Query: 463  FKSSEVM--APPDTHVIHHGIRKRYQGEGTHIFSETLNNLAAVIEEKESWDCILEERVFL 290
              +  +         V     RKRYQGE T  + ETL +LA ++E KE  +  +EERVFL
Sbjct: 985  VAAQRLSQGTSRSAEVFSRCRRKRYQGEFTRTYLETLTHLATIMEIKEYCELSIEERVFL 1044

Query: 289  L-ILCDE*LNSIVCREHLDQCAEMSADVQQ 203
            L   C+E LNS + REHL+QCA +SAD+QQ
Sbjct: 1045 LKFFCEEVLNSAIIREHLEQCASLSADLQQ 1074


Top