BLASTX nr result

ID: Papaver22_contig00028537 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Papaver22_contig00028537
         (494 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002284611.2| PREDICTED: DNA topoisomerase 2-binding prote...    94   1e-17
emb|CBI18968.3| unnamed protein product [Vitis vinifera]               94   1e-17
ref|XP_003548358.1| PREDICTED: DNA topoisomerase 2-binding prote...    91   1e-16
ref|XP_002520311.1| topbp1, putative [Ricinus communis] gi|22354...    84   1e-14
gb|AAG29194.1|AC078898_4 hypothetical protein [Arabidopsis thali...    77   1e-12

>ref|XP_002284611.2| PREDICTED: DNA topoisomerase 2-binding protein 1-B-like [Vitis
            vinifera]
          Length = 962

 Score = 94.0 bits (232), Expect = 1e-17
 Identities = 52/88 (59%), Positives = 63/88 (71%)
 Frame = +1

Query: 1    IFSPDHSIIAQNPANSHSAIQISTSWLSRKEKQDDGNQCDSSSVQGVNEQRTYDGFSETQ 180
            +FS D S + Q+ A+SHS+  +S  WL+R EK+DD       +  G  +  TYDGFSETQ
Sbjct: 879  LFSSDCSPLGQDHADSHSSFDLSKHWLNRIEKKDD-----ICNPPGDVKASTYDGFSETQ 933

Query: 181  TESQVVVYEEDLSGRQMMIDRHRTRSSM 264
            TESQVV YEEDLSGRQM+IDR RTRSSM
Sbjct: 934  TESQVVGYEEDLSGRQMIIDRVRTRSSM 961


>emb|CBI18968.3| unnamed protein product [Vitis vinifera]
          Length = 952

 Score = 94.0 bits (232), Expect = 1e-17
 Identities = 52/88 (59%), Positives = 63/88 (71%)
 Frame = +1

Query: 1    IFSPDHSIIAQNPANSHSAIQISTSWLSRKEKQDDGNQCDSSSVQGVNEQRTYDGFSETQ 180
            +FS D S + Q+ A+SHS+  +S  WL+R EK+DD       +  G  +  TYDGFSETQ
Sbjct: 869  LFSSDCSPLGQDHADSHSSFDLSKHWLNRIEKKDD-----ICNPPGDVKASTYDGFSETQ 923

Query: 181  TESQVVVYEEDLSGRQMMIDRHRTRSSM 264
            TESQVV YEEDLSGRQM+IDR RTRSSM
Sbjct: 924  TESQVVGYEEDLSGRQMIIDRVRTRSSM 951


>ref|XP_003548358.1| PREDICTED: DNA topoisomerase 2-binding protein 1-A-like [Glycine max]
          Length = 970

 Score = 90.5 bits (223), Expect = 1e-16
 Identities = 44/88 (50%), Positives = 60/88 (68%)
 Frame = +1

Query: 1    IFSPDHSIIAQNPANSHSAIQISTSWLSRKEKQDDGNQCDSSSVQGVNEQRTYDGFSETQ 180
            I+  D S+++++ +N H+   +S  WL+R  ++DD  +       G+     YDGFSETQ
Sbjct: 887  IYPSDRSVLSEDNSNPHTVFGLSKHWLNRSGRKDDNGEASQDRRAGI-----YDGFSETQ 941

Query: 181  TESQVVVYEEDLSGRQMMIDRHRTRSSM 264
            TESQVV YEEDLSGRQM+IDR RTRSS+
Sbjct: 942  TESQVVSYEEDLSGRQMLIDRVRTRSSL 969


>ref|XP_002520311.1| topbp1, putative [Ricinus communis] gi|223540530|gb|EEF42097.1|
            topbp1, putative [Ricinus communis]
          Length = 950

 Score = 84.0 bits (206), Expect = 1e-14
 Identities = 45/85 (52%), Positives = 56/85 (65%)
 Frame = +1

Query: 10   PDHSIIAQNPANSHSAIQISTSWLSRKEKQDDGNQCDSSSVQGVNEQRTYDGFSETQTES 189
            P   I+ ++   SHS I +   WL+R  K+DD +       +GV     YD F+ETQTES
Sbjct: 870  PSDPILGEDHGGSHSVIGVPNHWLNRTGKRDDLSNPSREVNRGV-----YDNFTETQTES 924

Query: 190  QVVVYEEDLSGRQMMIDRHRTRSSM 264
            QVV+YEEDLSGRQM+IDR RTRSSM
Sbjct: 925  QVVLYEEDLSGRQMIIDRVRTRSSM 949


>gb|AAG29194.1|AC078898_4 hypothetical protein [Arabidopsis thaliana]
          Length = 783

 Score = 77.0 bits (188), Expect = 1e-12
 Identities = 44/83 (53%), Positives = 51/83 (61%)
 Frame = +1

Query: 19  SIIAQNPANSHSAIQISTSWLSRKEKQDDGNQCDSSSVQGVNEQRTYDGFSETQTESQVV 198
           S+  Q    +HS   +S  W++R  K DD       S  G     TY  FSETQTESQVV
Sbjct: 706 SLNEQYNTGNHSVTGLSRHWINRVHKNDD-----MGSPPGDATTDTYGNFSETQTESQVV 760

Query: 199 VYEEDLSGRQMMIDRHRTRSSMT 267
            YEEDLSGRQM+IDR RTRSS+T
Sbjct: 761 GYEEDLSGRQMLIDRVRTRSSLT 783


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