BLASTX nr result

ID: Papaver22_contig00028535 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Papaver22_contig00028535
         (739 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002322526.1| predicted protein [Populus trichocarpa] gi|2...   100   4e-19
ref|XP_004165193.1| PREDICTED: LOW QUALITY PROTEIN: E3 ubiquitin...    99   1e-18
ref|XP_004134983.1| PREDICTED: E3 ubiquitin-protein ligase UPL5-...    99   1e-18
dbj|BAK01618.1| predicted protein [Hordeum vulgare subsp. vulgare]     96   6e-18
emb|CAJ26384.1| polyubiquitin-like protein [Brachypodium sylvati...    96   1e-17

>ref|XP_002322526.1| predicted protein [Populus trichocarpa] gi|222867156|gb|EEF04287.1|
           predicted protein [Populus trichocarpa]
          Length = 294

 Score =  100 bits (248), Expect = 4e-19
 Identities = 47/68 (69%), Positives = 51/68 (75%)
 Frame = -3

Query: 737 TSVKYLPVNGFSGLPYPLTIYKTSNSHDHLPSSHTCFYRLSLPHYPSLAITQHRLSFICQ 558
           TSVKYLPV GF GL   L IYK++  H+HLPSSHTCFYRL  P YPS+AI Q RL  I Q
Sbjct: 225 TSVKYLPVEGFRGLASRLYIYKSTEPHNHLPSSHTCFYRLCFPPYPSMAIMQDRLRLITQ 284

Query: 557 THVGCSFG 534
            HVGCSFG
Sbjct: 285 EHVGCSFG 292


>ref|XP_004165193.1| PREDICTED: LOW QUALITY PROTEIN: E3 ubiquitin-protein ligase UPL5-like
            [Cucumis sativus]
          Length = 887

 Score = 98.6 bits (244), Expect = 1e-18
 Identities = 46/68 (67%), Positives = 52/68 (76%)
 Frame = -3

Query: 737  TSVKYLPVNGFSGLPYPLTIYKTSNSHDHLPSSHTCFYRLSLPHYPSLAITQHRLSFICQ 558
            TS+KYLPV GFSGL   L IYK+S+ +DHLPSSHTCFYRL  P YPS +I + RL  I Q
Sbjct: 818  TSLKYLPVQGFSGLTSKLYIYKSSSPYDHLPSSHTCFYRLCFPPYPSRSIMKSRLQIITQ 877

Query: 557  THVGCSFG 534
             HVGCSFG
Sbjct: 878  EHVGCSFG 885


>ref|XP_004134983.1| PREDICTED: E3 ubiquitin-protein ligase UPL5-like [Cucumis sativus]
          Length = 925

 Score = 98.6 bits (244), Expect = 1e-18
 Identities = 46/68 (67%), Positives = 52/68 (76%)
 Frame = -3

Query: 737  TSVKYLPVNGFSGLPYPLTIYKTSNSHDHLPSSHTCFYRLSLPHYPSLAITQHRLSFICQ 558
            TS+KYLPV GFSGL   L IYK+S+ +DHLPSSHTCFYRL  P YPS +I + RL  I Q
Sbjct: 856  TSLKYLPVQGFSGLTSKLYIYKSSSPYDHLPSSHTCFYRLCFPPYPSRSIMKSRLQIITQ 915

Query: 557  THVGCSFG 534
             HVGCSFG
Sbjct: 916  EHVGCSFG 923


>dbj|BAK01618.1| predicted protein [Hordeum vulgare subsp. vulgare]
          Length = 581

 Score = 96.3 bits (238), Expect = 6e-18
 Identities = 46/68 (67%), Positives = 50/68 (73%)
 Frame = -3

Query: 737 TSVKYLPVNGFSGLPYPLTIYKTSNSHDHLPSSHTCFYRLSLPHYPSLAITQHRLSFICQ 558
           TSVKYLP  GF GL   L IYKT+ S DHLPSSHTCFYRL LP YPSL + Q++L  I Q
Sbjct: 512 TSVKYLPSEGFGGLSSKLYIYKTTESADHLPSSHTCFYRLCLPPYPSLKVMQNQLQKITQ 571

Query: 557 THVGCSFG 534
            HV CSFG
Sbjct: 572 EHVSCSFG 579


>emb|CAJ26384.1| polyubiquitin-like protein [Brachypodium sylvaticum]
          Length = 849

 Score = 95.5 bits (236), Expect = 1e-17
 Identities = 46/68 (67%), Positives = 50/68 (73%)
 Frame = -3

Query: 737 TSVKYLPVNGFSGLPYPLTIYKTSNSHDHLPSSHTCFYRLSLPHYPSLAITQHRLSFICQ 558
           TSVKYLP +GF GL   L IYKT  S DHLPSSHTCFYRL LP YPSL + Q++L  I Q
Sbjct: 780 TSVKYLPSDGFGGLSSKLYIYKTLESADHLPSSHTCFYRLCLPPYPSLKVMQNQLQKITQ 839

Query: 557 THVGCSFG 534
            HV CSFG
Sbjct: 840 EHVSCSFG 847


Top