BLASTX nr result
ID: Papaver22_contig00028478
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Papaver22_contig00028478
(595 letters)
Database: ./nr
23,641,837 sequences; 8,123,359,852 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gb|AAX96193.1| retrotransposon protein, putative, Ty1-copia sub-... 112 9e-33
gb|ABA98286.2| retrotransposon protein, putative, Ty1-copia subc... 112 9e-33
emb|CCH50966.1| T4.5 [Malus x robusta] 116 1e-32
gb|AAB82754.1| retrofit [Oryza longistaminata] 110 1e-32
gb|ABA98049.1| retrotransposon protein, putative, Ty1-copia subc... 112 1e-32
>gb|AAX96193.1| retrotransposon protein, putative, Ty1-copia sub-class [Oryza sativa
Japonica Group]
Length = 1621
Score = 112 bits (281), Expect(2) = 9e-33
Identities = 64/129 (49%), Positives = 79/129 (61%), Gaps = 10/129 (7%)
Frame = -3
Query: 359 ERYKSRLVD-------GVDYFDTFRPVSKATTIRIILTLRLKTG--V*NSYVSNAFLHGF 207
+RYK+RLV G+DY DTF PV KA TIRIIL+L + G + V NAFLHG+
Sbjct: 725 DRYKARLVAKGFKQRYGIDYEDTFSPVVKAATIRIILSLAVSKGWSLRQLDVQNAFLHGY 784
Query: 206 LNEDAYMTQPPGFIDSSKANHVCKLNRSLY-LKQAPRAWFERFYASLPQSGILDPLVIIQ 30
L E+ YM QPPGF D +K +HVCKL+++LY LKQAPRAWF R L G
Sbjct: 785 LEEEVYMLQPPGFEDPTKPHHVCKLDKALYGLKQAPRAWFSRLSKKLMDLGFKGSKADTS 844
Query: 29 RLFFNKMEL 3
F NK ++
Sbjct: 845 LFFLNKGDI 853
Score = 53.1 bits (126), Expect(2) = 9e-33
Identities = 24/43 (55%), Positives = 29/43 (67%)
Frame = -1
Query: 511 KDPKWQTAIIREKTALDENETWTLVPFNPSYNILGCKWVYKIK 383
KD W+ A+ E AL +N+TW LVP NI+GCKWVYKIK
Sbjct: 675 KDKNWKLAMDSEYDALVKNKTWHLVPPQRGRNIIGCKWVYKIK 717
>gb|ABA98286.2| retrotransposon protein, putative, Ty1-copia subclass [Oryza sativa
Japonica Group]
Length = 1478
Score = 112 bits (281), Expect(2) = 9e-33
Identities = 64/129 (49%), Positives = 79/129 (61%), Gaps = 10/129 (7%)
Frame = -3
Query: 359 ERYKSRLVD-------GVDYFDTFRPVSKATTIRIILTLRLKTG--V*NSYVSNAFLHGF 207
+RYK+RLV G+DY DTF PV KA TIRIIL+L + G + V NAFLHG+
Sbjct: 996 DRYKARLVAKGFKQRYGIDYEDTFSPVVKAATIRIILSLAVSKGWSLRQLDVQNAFLHGY 1055
Query: 206 LNEDAYMTQPPGFIDSSKANHVCKLNRSLY-LKQAPRAWFERFYASLPQSGILDPLVIIQ 30
L E+ YM QPPGF D +K +HVCKL+++LY LKQAPRAWF R L G
Sbjct: 1056 LEEEVYMLQPPGFEDPTKPHHVCKLDKALYGLKQAPRAWFSRLSKKLMDLGFKGSKADTS 1115
Query: 29 RLFFNKMEL 3
F NK ++
Sbjct: 1116 LFFLNKGDI 1124
Score = 53.1 bits (126), Expect(2) = 9e-33
Identities = 24/43 (55%), Positives = 29/43 (67%)
Frame = -1
Query: 511 KDPKWQTAIIREKTALDENETWTLVPFNPSYNILGCKWVYKIK 383
KD W+ A+ E AL +N+TW LVP NI+GCKWVYKIK
Sbjct: 946 KDKNWKLAMDSEYDALVKNKTWHLVPPQRGRNIIGCKWVYKIK 988
>emb|CCH50966.1| T4.5 [Malus x robusta]
Length = 1670
Score = 116 bits (290), Expect(2) = 1e-32
Identities = 61/111 (54%), Positives = 78/111 (70%), Gaps = 10/111 (9%)
Frame = -3
Query: 359 ERYKSRLV-------DGVDYFDTFRPVSKATTIRIILTLRLKTG--V*NSYVSNAFLHGF 207
ERYK+RLV +G+D+ +TF PV+K TTIRI+L++ + + VSNAFLHG
Sbjct: 1207 ERYKARLVAKGFHQQEGLDFSETFSPVAKPTTIRILLSIAVSYYWFIHQLDVSNAFLHGH 1266
Query: 206 LNEDAYMTQPPGFIDSSKANHVCKLNRSLY-LKQAPRAWFERFYASLPQSG 57
L ED YM QPPGF+D SK +HVCKL +SLY LKQAPRAW+E FY ++ G
Sbjct: 1267 LKEDVYMVQPPGFVDPSKPHHVCKLRKSLYGLKQAPRAWYEAFYTAILSLG 1317
Score = 49.3 bits (116), Expect(2) = 1e-32
Identities = 21/43 (48%), Positives = 27/43 (62%)
Frame = -1
Query: 511 KDPKWQTAIIREKTALDENETWTLVPFNPSYNILGCKWVYKIK 383
K W A+ E AL TW LVP + +YNI+GCKWV+K+K
Sbjct: 1157 KSSHWMEAMQFEFQALQSTGTWELVPNHSTYNIVGCKWVFKVK 1199
>gb|AAB82754.1| retrofit [Oryza longistaminata]
Length = 1445
Score = 110 bits (274), Expect(2) = 1e-32
Identities = 63/126 (50%), Positives = 78/126 (61%), Gaps = 10/126 (7%)
Frame = -3
Query: 359 ERYKSRLVD-------GVDYFDTFRPVSKATTIRIILTLRLKTG--V*NSYVSNAFLHGF 207
+RYK+RLV G+DY DTF PV KA TIRIIL++ + G + V NAFLHGF
Sbjct: 995 DRYKARLVAKGFKQRYGIDYEDTFSPVVKAATIRIILSIAVSRGWSLRQLDVQNAFLHGF 1054
Query: 206 LNEDAYMTQPPGFIDSSKANHVCKLNRSLY-LKQAPRAWFERFYASLPQSGILDPLVIIQ 30
L E+ YM QPPGF SSK ++VCKL+++LY LKQAPRAW+ R L + G
Sbjct: 1055 LEEEVYMQQPPGFESSSKPDYVCKLDKALYGLKQAPRAWYSRLSKKLVELGFEASKADTS 1114
Query: 29 RLFFNK 12
F NK
Sbjct: 1115 LFFLNK 1120
Score = 55.5 bits (132), Expect(2) = 1e-32
Identities = 23/42 (54%), Positives = 29/42 (69%)
Frame = -1
Query: 508 DPKWQTAIIREKTALDENETWTLVPFNPSYNILGCKWVYKIK 383
D W+ A+ E AL +N+TW LVP+ NI+GCKWVYKIK
Sbjct: 946 DKNWRDAMETEYNALIKNDTWHLVPYEKGQNIIGCKWVYKIK 987
>gb|ABA98049.1| retrotransposon protein, putative, Ty1-copia subclass [Oryza sativa
Japonica Group]
Length = 1460
Score = 112 bits (279), Expect(2) = 1e-32
Identities = 64/129 (49%), Positives = 79/129 (61%), Gaps = 10/129 (7%)
Frame = -3
Query: 359 ERYKSRLVD-------GVDYFDTFRPVSKATTIRIILTLRLKTG--V*NSYVSNAFLHGF 207
+RYK+RLV G+DY DTF PV KA TIRIIL+L + G + V NAFLHG+
Sbjct: 1003 DRYKARLVAKGFKQRYGIDYEDTFSPVVKAATIRIILSLAVSKGWSLRQLDVQNAFLHGY 1062
Query: 206 LNEDAYMTQPPGFIDSSKANHVCKLNRSLY-LKQAPRAWFERFYASLPQSGILDPLVIIQ 30
L E+ YM QPPGF D +K +HVCKL+++LY LKQAPRAWF R L G
Sbjct: 1063 LEEEVYMLQPPGFEDPTKPHHVCKLDKALYGLKQAPRAWFSRLSKKLMDLGFKGSKPDTS 1122
Query: 29 RLFFNKMEL 3
F NK ++
Sbjct: 1123 LFFLNKGDI 1131
Score = 53.1 bits (126), Expect(2) = 1e-32
Identities = 24/43 (55%), Positives = 29/43 (67%)
Frame = -1
Query: 511 KDPKWQTAIIREKTALDENETWTLVPFNPSYNILGCKWVYKIK 383
KD W+ A+ E AL +N+TW LVP NI+GCKWVYKIK
Sbjct: 953 KDKNWKLAMDSEYDALVKNKTWHLVPPQRGRNIIGCKWVYKIK 995