BLASTX nr result
ID: Papaver22_contig00028390
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Papaver22_contig00028390
(538 letters)
Database: ./nr
23,641,837 sequences; 8,123,359,852 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_002306348.1| predicted protein [Populus trichocarpa] gi|2... 145 3e-38
ref|XP_003523263.1| PREDICTED: E3 ubiquitin-protein ligase RKP-l... 141 2e-37
ref|XP_003526825.1| PREDICTED: E3 ubiquitin-protein ligase RKP-l... 144 4e-37
ref|XP_002276278.2| PREDICTED: E3 ubiquitin-protein ligase RKP-l... 140 6e-37
emb|CBI21499.3| unnamed protein product [Vitis vinifera] 140 6e-37
>ref|XP_002306348.1| predicted protein [Populus trichocarpa] gi|222855797|gb|EEE93344.1|
predicted protein [Populus trichocarpa]
Length = 827
Score = 145 bits (367), Expect(2) = 3e-38
Identities = 74/126 (58%), Positives = 86/126 (68%), Gaps = 2/126 (1%)
Frame = +2
Query: 14 RVGDQSFPISLSLKSDPHWINISRLGGSFNHFLKSHL*LKEE--VIQWGEGCMDDEETRI 187
R G+QSFP+ L LK+DPH +ISRLGGSF+H KSH +E VI+W EGCMDDEETR+
Sbjct: 595 RGGEQSFPVDLFLKNDPHRTDISRLGGSFSHLSKSHPVYDQEAEVIRWEEGCMDDEETRV 654
Query: 188 THSTTQKLCCCPXXXXXXXXXXXXPIRGAAKGSRGLCSRIPERSAYVATECSSGSLNDDL 367
TH TTQK CCC IR AKGSR C IP+RSA+VA ECS GSLND++
Sbjct: 655 THKTTQKPCCCSSHDIELSKISKHQIRYNAKGSRVHCGPIPDRSAHVAAECSEGSLNDEI 714
Query: 368 VGKPST 385
KPST
Sbjct: 715 ADKPST 720
Score = 37.7 bits (86), Expect(2) = 3e-38
Identities = 20/52 (38%), Positives = 27/52 (51%)
Frame = +1
Query: 382 YGDRPMQQLRSVPKASHLSTATXXXXXXXXXXXXXXXXXXAPNFKQASYYSS 537
+G RPM+ +R V + S +S+AT APNFKQAS+Y S
Sbjct: 728 FGYRPMRDIRIVQRESDVSSATLREEELLDTLLLLYHIGVAPNFKQASHYMS 779
>ref|XP_003523263.1| PREDICTED: E3 ubiquitin-protein ligase RKP-like [Glycine max]
Length = 1269
Score = 141 bits (355), Expect(2) = 2e-37
Identities = 70/126 (55%), Positives = 84/126 (66%), Gaps = 2/126 (1%)
Frame = +2
Query: 14 RVGDQSFPISLSLKSDPHWINISRLGGSFNHFLKSHL*LKEE--VIQWGEGCMDDEETRI 187
R G+Q+FP+ L LK+DPH +ISRLGGS++H K H + E VIQW EGCMD EETR+
Sbjct: 595 RGGEQTFPVHLFLKNDPHRADISRLGGSYSHLSKLHPTIDHEMEVIQWDEGCMDSEETRV 654
Query: 188 THSTTQKLCCCPXXXXXXXXXXXXPIRGAAKGSRGLCSRIPERSAYVATECSSGSLNDDL 367
THST QK CCC P + AKGS G CS IPER A+VA ECS GSLND++
Sbjct: 655 THSTRQKPCCCSSYDSDFTRNFKVPAKYLAKGSSGHCSSIPERPAHVAAECSDGSLNDEI 714
Query: 368 VGKPST 385
KPS+
Sbjct: 715 TDKPSS 720
Score = 40.0 bits (92), Expect(2) = 2e-37
Identities = 20/53 (37%), Positives = 28/53 (52%)
Frame = +1
Query: 373 QTKYGDRPMQQLRSVPKASHLSTATXXXXXXXXXXXXXXXXXXAPNFKQASYY 531
+ +YG R + ++SVPK +++ST T APNFKQASYY
Sbjct: 725 EPEYGYRQVHHMKSVPKDTNMSTDTLQEEELLDALLWLYHVGLAPNFKQASYY 777
>ref|XP_003526825.1| PREDICTED: E3 ubiquitin-protein ligase RKP-like [Glycine max]
Length = 1269
Score = 144 bits (364), Expect(2) = 4e-37
Identities = 72/126 (57%), Positives = 86/126 (68%), Gaps = 2/126 (1%)
Frame = +2
Query: 14 RVGDQSFPISLSLKSDPHWINISRLGGSFNHFLKSHL*L--KEEVIQWGEGCMDDEETRI 187
R G+QSFP+ L LK+DPH +ISRLGGS++H K H + + EVIQW EGCMD EETR+
Sbjct: 595 RGGEQSFPVHLFLKNDPHRADISRLGGSYSHLSKLHPTIGHEMEVIQWDEGCMDSEETRV 654
Query: 188 THSTTQKLCCCPXXXXXXXXXXXXPIRGAAKGSRGLCSRIPERSAYVATECSSGSLNDDL 367
THST QK CCC P + AKGSRG CS IPER A+VA ECS GSLND++
Sbjct: 655 THSTRQKPCCCSNYDSDFTRNFKVPAKYLAKGSRGHCSSIPERPAHVAAECSDGSLNDEI 714
Query: 368 VGKPST 385
KPS+
Sbjct: 715 TDKPSS 720
Score = 35.4 bits (80), Expect(2) = 4e-37
Identities = 19/53 (35%), Positives = 26/53 (49%)
Frame = +1
Query: 373 QTKYGDRPMQQLRSVPKASHLSTATXXXXXXXXXXXXXXXXXXAPNFKQASYY 531
+ +YG R M ++SVPK +++ST A NFKQASYY
Sbjct: 725 EPEYGYRQMHHMKSVPKDTNMSTDRLREEELVDALLWLYHVGLALNFKQASYY 777
>ref|XP_002276278.2| PREDICTED: E3 ubiquitin-protein ligase RKP-like [Vitis vinifera]
Length = 1276
Score = 140 bits (353), Expect(2) = 6e-37
Identities = 71/126 (56%), Positives = 84/126 (66%), Gaps = 2/126 (1%)
Frame = +2
Query: 14 RVGDQSFPISLSLKSDPHWINISRLGGSFNHFLKSHL*LKEE--VIQWGEGCMDDEETRI 187
R G Q+FP+ L LKSDPH +ISRLGGSF+H KSH +E V++W EGCMDDEETR+
Sbjct: 597 RGGQQTFPMGLFLKSDPHRSDISRLGGSFSHLSKSHPVTDQEAEVVRWEEGCMDDEETRV 656
Query: 188 THSTTQKLCCCPXXXXXXXXXXXXPIRGAAKGSRGLCSRIPERSAYVATECSSGSLNDDL 367
TH T Q CCC PIR AKGSRG CS PE SA VA ECS+G+LND++
Sbjct: 657 THLTRQHPCCCSSYDVDFTRVSKDPIRYTAKGSRGHCSTSPETSAQVAAECSAGTLNDEI 716
Query: 368 VGKPST 385
KPS+
Sbjct: 717 ADKPSS 722
Score = 38.9 bits (89), Expect(2) = 6e-37
Identities = 20/55 (36%), Positives = 29/55 (52%)
Frame = +1
Query: 373 QTKYGDRPMQQLRSVPKASHLSTATXXXXXXXXXXXXXXXXXXAPNFKQASYYSS 537
+ ++ RP+Q +R VP+ S+ STAT AP+FKQAS+Y S
Sbjct: 727 EPEFDYRPVQHMRIVPRESNFSTATLREEELLDAMLLLYHIGLAPSFKQASHYMS 781
>emb|CBI21499.3| unnamed protein product [Vitis vinifera]
Length = 1259
Score = 140 bits (353), Expect(2) = 6e-37
Identities = 71/126 (56%), Positives = 84/126 (66%), Gaps = 2/126 (1%)
Frame = +2
Query: 14 RVGDQSFPISLSLKSDPHWINISRLGGSFNHFLKSHL*LKEE--VIQWGEGCMDDEETRI 187
R G Q+FP+ L LKSDPH +ISRLGGSF+H KSH +E V++W EGCMDDEETR+
Sbjct: 580 RGGQQTFPMGLFLKSDPHRSDISRLGGSFSHLSKSHPVTDQEAEVVRWEEGCMDDEETRV 639
Query: 188 THSTTQKLCCCPXXXXXXXXXXXXPIRGAAKGSRGLCSRIPERSAYVATECSSGSLNDDL 367
TH T Q CCC PIR AKGSRG CS PE SA VA ECS+G+LND++
Sbjct: 640 THLTRQHPCCCSSYDVDFTRVSKDPIRYTAKGSRGHCSTSPETSAQVAAECSAGTLNDEI 699
Query: 368 VGKPST 385
KPS+
Sbjct: 700 ADKPSS 705
Score = 38.9 bits (89), Expect(2) = 6e-37
Identities = 20/55 (36%), Positives = 29/55 (52%)
Frame = +1
Query: 373 QTKYGDRPMQQLRSVPKASHLSTATXXXXXXXXXXXXXXXXXXAPNFKQASYYSS 537
+ ++ RP+Q +R VP+ S+ STAT AP+FKQAS+Y S
Sbjct: 710 EPEFDYRPVQHMRIVPRESNFSTATLREEELLDAMLLLYHIGLAPSFKQASHYMS 764