BLASTX nr result

ID: Papaver22_contig00027495 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Papaver22_contig00027495
         (460 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI25589.3| unnamed protein product [Vitis vinifera]              271   4e-71
ref|XP_002267199.1| PREDICTED: 116 kDa U5 small nuclear ribonucl...   271   4e-71
ref|XP_004139267.1| PREDICTED: 116 kDa U5 small nuclear ribonucl...   270   7e-71
ref|XP_003609507.1| 116 kDa U5 small nuclear ribonucleoprotein c...   269   2e-70
ref|XP_002324575.1| predicted protein [Populus trichocarpa] gi|2...   268   3e-70

>emb|CBI25589.3| unnamed protein product [Vitis vinifera]
          Length = 931

 Score =  271 bits (693), Expect = 4e-71
 Identities = 130/152 (85%), Positives = 141/152 (92%)
 Frame = +3

Query: 3    SMKCFAETPNKKSKLTMIAEPLEKGLAEDIENGVVSIDWPQKRLGVFFKDAYKWDPLAAK 182
            SMKCFAETPNKK+K+TMIAEPLEKGLAEDIENGVVSIDW +K+LG FF+  Y WD LAA+
Sbjct: 629  SMKCFAETPNKKNKITMIAEPLEKGLAEDIENGVVSIDWHRKKLGDFFQTKYDWDLLAAR 688

Query: 183  SVWAFRPDKQGSNILLDDTFFGEVDKSLLNAVKDSVVQGFQWGAREGPLCDEPIRNVKFK 362
            S+WAF PDKQG NILLDDT   EVDK+LLNAVKDS+VQGFQWGAREGPLCDEPIRNVKFK
Sbjct: 689  SIWAFGPDKQGPNILLDDTLSSEVDKNLLNAVKDSIVQGFQWGAREGPLCDEPIRNVKFK 748

Query: 363  IVDAKIAPEPLHRGSGQIIPTARRVAYSAFLM 458
            IVDA+IAPEPLHRG+GQIIPTARRVAYSAFLM
Sbjct: 749  IVDARIAPEPLHRGTGQIIPTARRVAYSAFLM 780


>ref|XP_002267199.1| PREDICTED: 116 kDa U5 small nuclear ribonucleoprotein component
            [Vitis vinifera] gi|147858113|emb|CAN81413.1|
            hypothetical protein VITISV_031170 [Vitis vinifera]
          Length = 988

 Score =  271 bits (693), Expect = 4e-71
 Identities = 130/152 (85%), Positives = 141/152 (92%)
 Frame = +3

Query: 3    SMKCFAETPNKKSKLTMIAEPLEKGLAEDIENGVVSIDWPQKRLGVFFKDAYKWDPLAAK 182
            SMKCFAETPNKK+K+TMIAEPLEKGLAEDIENGVVSIDW +K+LG FF+  Y WD LAA+
Sbjct: 686  SMKCFAETPNKKNKITMIAEPLEKGLAEDIENGVVSIDWHRKKLGDFFQTKYDWDLLAAR 745

Query: 183  SVWAFRPDKQGSNILLDDTFFGEVDKSLLNAVKDSVVQGFQWGAREGPLCDEPIRNVKFK 362
            S+WAF PDKQG NILLDDT   EVDK+LLNAVKDS+VQGFQWGAREGPLCDEPIRNVKFK
Sbjct: 746  SIWAFGPDKQGPNILLDDTLSSEVDKNLLNAVKDSIVQGFQWGAREGPLCDEPIRNVKFK 805

Query: 363  IVDAKIAPEPLHRGSGQIIPTARRVAYSAFLM 458
            IVDA+IAPEPLHRG+GQIIPTARRVAYSAFLM
Sbjct: 806  IVDARIAPEPLHRGTGQIIPTARRVAYSAFLM 837


>ref|XP_004139267.1| PREDICTED: 116 kDa U5 small nuclear ribonucleoprotein component-like
            [Cucumis sativus] gi|449493675|ref|XP_004159406.1|
            PREDICTED: 116 kDa U5 small nuclear ribonucleoprotein
            component-like [Cucumis sativus]
          Length = 988

 Score =  270 bits (691), Expect = 7e-71
 Identities = 128/152 (84%), Positives = 142/152 (93%)
 Frame = +3

Query: 3    SMKCFAETPNKKSKLTMIAEPLEKGLAEDIENGVVSIDWPQKRLGVFFKDAYKWDPLAAK 182
            SMKCFAETPNKK+K+TMIAEPLE+GLAEDIENGVVS+DW +K+LG FF+  Y+WD LAA+
Sbjct: 686  SMKCFAETPNKKNKITMIAEPLERGLAEDIENGVVSLDWSRKKLGDFFQTKYEWDLLAAR 745

Query: 183  SVWAFRPDKQGSNILLDDTFFGEVDKSLLNAVKDSVVQGFQWGAREGPLCDEPIRNVKFK 362
            S+WAF PDKQG NILLDDT   EVDK+LLNAVKDS+VQGFQWGAREGPLCDEPIRNVKFK
Sbjct: 746  SIWAFGPDKQGPNILLDDTLSSEVDKNLLNAVKDSIVQGFQWGAREGPLCDEPIRNVKFK 805

Query: 363  IVDAKIAPEPLHRGSGQIIPTARRVAYSAFLM 458
            IVDA+IAPEPLHRGSGQIIPTARRVAYS+FLM
Sbjct: 806  IVDARIAPEPLHRGSGQIIPTARRVAYSSFLM 837


>ref|XP_003609507.1| 116 kDa U5 small nuclear ribonucleoprotein component [Medicago
            truncatula] gi|355510562|gb|AES91704.1| 116 kDa U5 small
            nuclear ribonucleoprotein component [Medicago truncatula]
          Length = 983

 Score =  269 bits (688), Expect = 2e-70
 Identities = 130/152 (85%), Positives = 140/152 (92%)
 Frame = +3

Query: 3    SMKCFAETPNKKSKLTMIAEPLEKGLAEDIENGVVSIDWPQKRLGVFFKDAYKWDPLAAK 182
            SMKCFAETPNKK+K+TMIAEPLE+GLAEDIENGVVS DW +K+LG FF+  Y WD LAA+
Sbjct: 686  SMKCFAETPNKKNKITMIAEPLERGLAEDIENGVVSTDWNRKKLGEFFQTKYDWDLLAAR 745

Query: 183  SVWAFRPDKQGSNILLDDTFFGEVDKSLLNAVKDSVVQGFQWGAREGPLCDEPIRNVKFK 362
            S+WAF PDKQG NILLDDT   EVDKSLLNAVKDS+VQGFQWGAREGPLCDEPIRNVKFK
Sbjct: 746  SIWAFGPDKQGPNILLDDTLPTEVDKSLLNAVKDSIVQGFQWGAREGPLCDEPIRNVKFK 805

Query: 363  IVDAKIAPEPLHRGSGQIIPTARRVAYSAFLM 458
            IVDA+IAPEPLHRGSGQIIPTARRVAYSAFLM
Sbjct: 806  IVDARIAPEPLHRGSGQIIPTARRVAYSAFLM 837


>ref|XP_002324575.1| predicted protein [Populus trichocarpa] gi|222866009|gb|EEF03140.1|
            predicted protein [Populus trichocarpa]
          Length = 869

 Score =  268 bits (686), Expect = 3e-70
 Identities = 131/152 (86%), Positives = 138/152 (90%)
 Frame = +3

Query: 3    SMKCFAETPNKKSKLTMIAEPLEKGLAEDIENGVVSIDWPQKRLGVFFKDAYKWDPLAAK 182
            SMKCFAETPNKK+K+TMIAEPLEKGLAEDIENGVVSIDW +K LG FFK  Y WD LAA+
Sbjct: 636  SMKCFAETPNKKNKITMIAEPLEKGLAEDIENGVVSIDWNRKALGDFFKTKYDWDLLAAR 695

Query: 183  SVWAFRPDKQGSNILLDDTFFGEVDKSLLNAVKDSVVQGFQWGAREGPLCDEPIRNVKFK 362
            S+WAF PDKQG NILLDDT   EVDK LL AVKDS+VQGFQWGAREGPLCDEPIRNVKFK
Sbjct: 696  SIWAFGPDKQGPNILLDDTLPTEVDKGLLGAVKDSIVQGFQWGAREGPLCDEPIRNVKFK 755

Query: 363  IVDAKIAPEPLHRGSGQIIPTARRVAYSAFLM 458
            IVDA+IAPEPLHRGSGQIIPTARRVAYSAFLM
Sbjct: 756  IVDARIAPEPLHRGSGQIIPTARRVAYSAFLM 787


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