BLASTX nr result

ID: Papaver22_contig00027477 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Papaver22_contig00027477
         (552 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AFK37781.1| unknown [Lotus japonicus]                               83   3e-14
ref|XP_003611119.1| F-box family protein [Medicago truncatula] g...    81   1e-13
ref|XP_002301588.1| f-box family protein [Populus trichocarpa] g...    80   2e-13
ref|XP_003611117.1| F-box protein [Medicago truncatula] gi|35551...    80   3e-13
ref|XP_002279122.1| PREDICTED: F-box protein At3g07870 [Vitis vi...    79   4e-13

>gb|AFK37781.1| unknown [Lotus japonicus]
          Length = 489

 Score = 83.2 bits (204), Expect = 3e-14
 Identities = 66/193 (34%), Positives = 93/193 (48%), Gaps = 19/193 (9%)
 Frame = +3

Query: 3   ICNPITREYIILP---------KFEGDYYWTGFGYIPSTNEYKVVRI-------YADSNV 134
           +CNPIT E+I LP         KF     + GFG+ P  NEYKVVRI       +     
Sbjct: 197 VCNPITGEFIRLPQTSRIGKTNKFSIQEIYAGFGFQPKNNEYKVVRILRGLQFYHGIMAA 256

Query: 135 QVYTLGSGIGWRNLGKMENKIELWTIRSGAFANGALHWVDGY-GT--ILAFHLTDEKFRE 305
           +V+TLG+   WRN+    N +  + +R     +GALHW+  Y GT  IL F    E+FR 
Sbjct: 257 EVHTLGTST-WRNV--EVNSMYFYHLRFPTCVSGALHWIGSYHGTLSILCFDFESERFRS 313

Query: 306 LPSPPWFTRPSFPHFPISLGVLEDCLSATHCSIFDGSELWLLRKNKDNCDELSWSKEFSF 485
            P+PP   +       I++G L   L    C  F     +++   K+   + SW+K FSF
Sbjct: 314 FPTPPCLYQSCTE--SITMGELRGSLYI--CDSFSKGTPFVMWIMKEYGFKESWTKIFSF 369

Query: 486 EDVRILRDSSPFG 524
           + +   R   PFG
Sbjct: 370 DTMSSYR--WPFG 380


>ref|XP_003611119.1| F-box family protein [Medicago truncatula]
           gi|355512454|gb|AES94077.1| F-box family protein
           [Medicago truncatula]
          Length = 560

 Score = 81.3 bits (199), Expect = 1e-13
 Identities = 54/172 (31%), Positives = 84/172 (48%), Gaps = 27/172 (15%)
 Frame = +3

Query: 3   ICNPITREYIILPKFEGDYYW-------TGFGYIPSTNEYKVV------------RIYAD 125
           ICNP+TRE+ ILP+      W        GFG+ P TNEYKV+             ++  
Sbjct: 282 ICNPVTREFTILPELTTTSDWFNSARVQAGFGFQPKTNEYKVIIMWNKYVRRDNRLVFER 341

Query: 126 SNVQVYTLGSGIGWRNLGKMENKIELWTIRSGAFANGALHWVD----GYGTILAFHLTDE 293
             ++++TLG+   WRN+ +++ +I    + +    NGALHW+        +IL F+   E
Sbjct: 342 VVLEIHTLGTS-SWRNV-EVDPQISFLKLLNPTCVNGALHWIIFEAWQQKSILCFNFESE 399

Query: 294 KFRELPSPPWF---TRPSFPH-FPISLGVLEDCLSATHCSIFDGSELWLLRK 437
           + +  PSPP         FPH  PI LG L+  L   H S  +   +W++ +
Sbjct: 400 RLQSFPSPPHVFGNHDNGFPHSMPIRLGELKGFLYICHRSSLENVTMWVMNE 451


>ref|XP_002301588.1| f-box family protein [Populus trichocarpa]
           gi|222843314|gb|EEE80861.1| f-box family protein
           [Populus trichocarpa]
          Length = 408

 Score = 80.1 bits (196), Expect = 2e-13
 Identities = 67/187 (35%), Positives = 89/187 (47%), Gaps = 27/187 (14%)
 Frame = +3

Query: 3   ICNPITREYIILPK---FEGDYYWTGFGYIPSTNEYKVVR-----------------IYA 122
           I NP T  Y  LPK   +       GFG+ P TNEYKV+R                 IY 
Sbjct: 144 IYNPFTGRYKELPKSLQYPDQEVVFGFGFNPKTNEYKVIRIVYYRNGHGRYPRSRRIIYP 203

Query: 123 DSNVQVYTLGSGIGWRNLGKMENKIELWTIRSGAFANGALHWVD------GYGTILAFHL 284
            S VQ+ TLG   GWR+LGK+  +  L    S    NG LHWV           +++F L
Sbjct: 204 LSQVQILTLGCP-GWRSLGKVSYR--LVRRASETLVNGRLHWVSRPCRNKPARRLVSFDL 260

Query: 285 TDEKFRELPSPPWFTRPSFPHFPISLGVLEDCLS-ATHCSIFDGSELWLLRKNKDNCDEL 461
           TDE+FRE+P P              L VL  CLS A +C+ +   E+W++++   N  E 
Sbjct: 261 TDEQFREVPKPDC---GGLNRCDYHLAVLRGCLSVAVYCN-YGRLEIWVMKEY--NVKE- 313

Query: 462 SWSKEFS 482
           SW KE++
Sbjct: 314 SWVKEYN 320


>ref|XP_003611117.1| F-box protein [Medicago truncatula] gi|355512452|gb|AES94075.1|
           F-box protein [Medicago truncatula]
          Length = 490

 Score = 79.7 bits (195), Expect = 3e-13
 Identities = 63/212 (29%), Positives = 98/212 (46%), Gaps = 29/212 (13%)
 Frame = +3

Query: 3   ICNPITREYIILPKFEGDYYW---------TGFGYIPSTNEYKVVRI---YADSN----- 131
           ICNP+TRE+ ILP+      W          GFG+ P TNEYKV+ +   Y   N     
Sbjct: 208 ICNPVTREFTILPELTTTSDWFNRARARVQAGFGFQPKTNEYKVIIMWNKYVRRNNRLVF 267

Query: 132 ----VQVYTLGSGIGWRNLGKMENKIELWTIRSGAFANGALHWV----DGYGTILAFHLT 287
               ++++TLG+   WR + +++ +I    + +    NGALHW+        +IL F+  
Sbjct: 268 ERVVLEIHTLGTP-SWRKV-EVDPQISFLKLLNPTCVNGALHWIIFETGQQKSILCFNFE 325

Query: 288 DEKFRELPSPPWF---TRPSFP-HFPISLGVLEDCLSATHCSIFDGSELWLLRKNKDNCD 455
            E+ +  PSPP         FP   PI LG L+  L   H S  +   +W++  N+    
Sbjct: 326 SERLQSFPSPPHVFGNHDNGFPLSMPIRLGELKGFLYICHISSLENVTMWVM--NEYGIG 383

Query: 456 ELSWSKEFSFEDVRILRDSSPFGFMKSGRLLC 551
           E SW+  +S +   +L   +  G+    R  C
Sbjct: 384 E-SWTIVYSIDTSLLLMPGTCLGYPDPWRCGC 414


>ref|XP_002279122.1| PREDICTED: F-box protein At3g07870 [Vitis vinifera]
           gi|147785390|emb|CAN68678.1| hypothetical protein
           VITISV_041941 [Vitis vinifera]
          Length = 409

 Score = 79.3 bits (194), Expect = 4e-13
 Identities = 66/183 (36%), Positives = 87/183 (47%), Gaps = 25/183 (13%)
 Frame = +3

Query: 9   NPITREYIILPK---FEGDYYWTGFGYIPSTNEYKVVRIY-----------------ADS 128
           NP TR++  LPK   +       GFGY P T  YKVV++                  + S
Sbjct: 147 NPFTRDFKQLPKSLQYPDQEVVFGFGYHPMTEVYKVVKVVYYRNGYGGFSRFRRITCSQS 206

Query: 129 NVQVYTLGSGIGWRNLGKMENKIELWTIRSGAFANGALHWVDG---YGT--ILAFHLTDE 293
            VQV TLGS   WR+LGK+  +++ W   S A  NG LHWV     Y T  I++F L DE
Sbjct: 207 EVQVLTLGSPT-WRSLGKVSYQLDRWP--SEALVNGRLHWVTRPRRYVTRFIVSFDLADE 263

Query: 294 KFRELPSPPWFTRPSFPHFPISLGVLEDCLSATHCSIFDGSELWLLRKNKDNCDELSWSK 473
           +FRE+P P              L VL  CLSA         E+W++   K+   + SW K
Sbjct: 264 QFREIPKPDC---GGLSRCNYHLLVLGGCLSAAVHRSNGKLEVWVM---KEYDVKESWIK 317

Query: 474 EFS 482
           EF+
Sbjct: 318 EFN 320


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