BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Papaver22_contig00027417
         (943 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_004136599.1| PREDICTED: DNA topoisomerase 3-alpha-like [C...   195   1e-47
emb|CBI37517.3| unnamed protein product [Vitis vinifera]              186   5e-45
ref|XP_002264607.1| PREDICTED: DNA topoisomerase 3-alpha [Vitis ...   186   5e-45
ref|XP_002527391.1| prokaryotic DNA topoisomerase, putative [Ric...   184   3e-44
ref|XP_002864876.1| hypothetical protein ARALYDRAFT_496584 [Arab...   182   1e-43

>ref|XP_004136599.1| PREDICTED: DNA topoisomerase 3-alpha-like [Cucumis sativus]
          Length = 925

 Score =  195 bits (496), Expect = 1e-47
 Identities = 118/304 (38%), Positives = 162/304 (53%), Gaps = 26/304 (8%)
 Frame = -2

Query: 873  SEIPKYYTGQMLTPIW-ALVPGTTXXXXXXXXXXXLDYMIKEGTGTDSTMHIHVEKCLDG 697
            S IP Y +GQ   P    L  G T           L  M KEG GTD+TMH H++K LD 
Sbjct: 474  STIPTYVSGQQFVPTTLTLDSGVTRPPPLLSEADLLSCMDKEGIGTDATMHDHIKKLLDR 533

Query: 696  -YATRDVNMLLTPTDLGQALVKGYHDMGYKLKQANLD--MEKDMQDIRTQTRRKADVLKD 526
             YAT+D N   TPT+LG+ALV GY DMGY L + NL   ME +M+ +   T+RK +VL  
Sbjct: 534  FYATKDANTRFTPTNLGEALVMGYDDMGYNLWKPNLRAIMEHEMKAVSEGTKRKDEVLAS 593

Query: 525  CLEQAETSYKEVTENRMALIQAGETFLGKKSNC-----------VRRCSTCDESEMVLQT 379
            CL+Q +T + +   N+  L++A E F  + +             V+ C  C +S+MVL+ 
Sbjct: 594  CLQQMKTCFLDARVNKQKLLEAMEVFFERSNGSGGDENRAVGEVVQLCGLCQDSDMVLKR 653

Query: 378  RDGGNFEVACAR-ANCKGVVKLPSCIETATVTDQVCEFCVPRKVFKIRFKFREGEIPRIY 202
               GN+ V C     C+ VV LP  I  ATVT   C  C P  V+ I+FKFR+ EIP  Y
Sbjct: 654  NRDGNYMVGCLGFPQCRNVVWLPGSIAEATVTSDRCTLCTPGPVYLIQFKFRQLEIPPNY 713

Query: 201  RSMHVGCI-VCDRLINQLKNLCGF---------GRSNGWTREDSPSGMVYCVKCKQSGHV 52
             + H+GC+  CD ++ QL  +CG          G S+   + D+P G   C+ C+Q GH 
Sbjct: 714  NANHLGCVGGCDDILRQLTEICGTGSRVSARGRGTSSSNVQRDNP-GQSVCIFCQQVGHS 772

Query: 51   FSEC 40
             ++C
Sbjct: 773  SNDC 776


>emb|CBI37517.3| unnamed protein product [Vitis vinifera]
          Length = 589

 Score =  186 bits (473), Expect = 5e-45
 Identities = 113/305 (37%), Positives = 160/305 (52%), Gaps = 27/305 (8%)
 Frame = -2

Query: 873  SEIPKYYTGQMLTPIW-ALVPGTTXXXXXXXXXXXLDYMIKEGTGTDSTMHIHVEKCLDG 697
            S IP Y  GQ   P    L  G T           L+ M K G GTD+TMH H++K LD 
Sbjct: 142  SMIPTYVFGQQFIPTTLTLDSGVTRPPPLLSEADLLNCMDKAGIGTDATMHDHIKKLLDR 201

Query: 696  -YATRDVNMLLTPTDLGQALVKGYHDMGYKLKQANLD--MEKDMQDIRTQTRRKADVLKD 526
             YAT+D N   +PT+LG+ALV GY DMGY+L +  L   ME DM+ +   T+R+ +VL  
Sbjct: 202  FYATKDSNTRFSPTNLGEALVMGYDDMGYELWKPYLRSMMECDMKAVSIGTKRRNEVLTT 261

Query: 525  CLEQAETSYKEVTENRMALIQAGETFLGKKS-----------NCVRRCSTCDESEMVLQT 379
            CLEQ +  + +   N++ L++A   F  + +           + VR+C+ C ES+MVL+ 
Sbjct: 262  CLEQMKACFLDARLNKVKLLEAMALFFERSNRSSGDEQHEVGDVVRQCTLCQESDMVLRR 321

Query: 378  RDGGNFEVAC-ARANCKGVVKLPSCIETATVTDQVCEFCVPRKVFKIRFKFREGEIPRIY 202
            +  GNF V C     C+ VV LP  I  A +T   C  C P  V+KI+FKFR  EIP  Y
Sbjct: 322  KPDGNFMVGCLGYPQCRNVVWLPGSISEAAITTISCNHCTPGPVYKIQFKFRRLEIPPNY 381

Query: 201  RSMHVGCIV-CDRLINQLKNLCGFG----------RSNGWTREDSPSGMVYCVKCKQSGH 55
               H+GC+  CD ++ QL  +CG G           ++    + S +    C+ C Q+GH
Sbjct: 382  NIDHLGCVCGCDEILRQLTEICGTGSRISARGRGSNASSTNAQRSNTRQTACIHCSQTGH 441

Query: 54   VFSEC 40
              ++C
Sbjct: 442  SSNDC 446


>ref|XP_002264607.1| PREDICTED: DNA topoisomerase 3-alpha [Vitis vinifera]
          Length = 914

 Score =  186 bits (473), Expect = 5e-45
 Identities = 113/305 (37%), Positives = 160/305 (52%), Gaps = 27/305 (8%)
 Frame = -2

Query: 873  SEIPKYYTGQMLTPIW-ALVPGTTXXXXXXXXXXXLDYMIKEGTGTDSTMHIHVEKCLDG 697
            S IP Y  GQ   P    L  G T           L+ M K G GTD+TMH H++K LD 
Sbjct: 467  SMIPTYVFGQQFIPTTLTLDSGVTRPPPLLSEADLLNCMDKAGIGTDATMHDHIKKLLDR 526

Query: 696  -YATRDVNMLLTPTDLGQALVKGYHDMGYKLKQANLD--MEKDMQDIRTQTRRKADVLKD 526
             YAT+D N   +PT+LG+ALV GY DMGY+L +  L   ME DM+ +   T+R+ +VL  
Sbjct: 527  FYATKDSNTRFSPTNLGEALVMGYDDMGYELWKPYLRSMMECDMKAVSIGTKRRNEVLTT 586

Query: 525  CLEQAETSYKEVTENRMALIQAGETFLGKKS-----------NCVRRCSTCDESEMVLQT 379
            CLEQ +  + +   N++ L++A   F  + +           + VR+C+ C ES+MVL+ 
Sbjct: 587  CLEQMKACFLDARLNKVKLLEAMALFFERSNRSSGDEQHEVGDVVRQCTLCQESDMVLRR 646

Query: 378  RDGGNFEVAC-ARANCKGVVKLPSCIETATVTDQVCEFCVPRKVFKIRFKFREGEIPRIY 202
            +  GNF V C     C+ VV LP  I  A +T   C  C P  V+KI+FKFR  EIP  Y
Sbjct: 647  KPDGNFMVGCLGYPQCRNVVWLPGSISEAAITTISCNHCTPGPVYKIQFKFRRLEIPPNY 706

Query: 201  RSMHVGCIV-CDRLINQLKNLCGFG----------RSNGWTREDSPSGMVYCVKCKQSGH 55
               H+GC+  CD ++ QL  +CG G           ++    + S +    C+ C Q+GH
Sbjct: 707  NIDHLGCVCGCDEILRQLTEICGTGSRISARGRGSNASSTNAQRSNTRQTACIHCSQTGH 766

Query: 54   VFSEC 40
              ++C
Sbjct: 767  SSNDC 771


>ref|XP_002527391.1| prokaryotic DNA topoisomerase, putative [Ricinus communis]
            gi|223533243|gb|EEF34998.1| prokaryotic DNA
            topoisomerase, putative [Ricinus communis]
          Length = 833

 Score =  184 bits (467), Expect = 3e-44
 Identities = 114/305 (37%), Positives = 158/305 (51%), Gaps = 27/305 (8%)
 Frame = -2

Query: 873  SEIPKYYTGQMLTPIW-ALVPGTTXXXXXXXXXXXLDYMIKEGTGTDSTMHIHVEKCLDG 697
            S IP Y  GQ   P    L  G T           L  M K G GTD+TMH H++K LD 
Sbjct: 470  SMIPTYVHGQQFMPTTLTLDSGVTRPPPLLSESDLLSCMDKAGIGTDATMHDHIKKLLDR 529

Query: 696  -YATRDVNMLLTPTDLGQALVKGYHDMGYKLKQANLD--MEKDMQDIRTQTRRKADVLKD 526
             YAT+D N   +PT+LG+ALV GY DMGY+L + NL   ME DM+++    + KA+VL+ 
Sbjct: 530  FYATKDANTRFSPTNLGEALVMGYDDMGYELWKPNLRSMMEYDMKEVSMGHKSKAEVLET 589

Query: 525  CLEQAETSYKEVTENRMALIQAGETFLGKKS-----------NCVRRCSTCDESEMVLQT 379
            CL+Q +T + +   N++ L++A   F  +             + VR+C  C E+ MVL+ 
Sbjct: 590  CLQQMKTCFLDARINKVKLLEAMAVFFERSDRSSGNDNHATVDIVRQCGLCRETNMVLRR 649

Query: 378  RDGGNFEVAC-ARANCKGVVKLPSCIETATVTDQVCEFCVPRKVFKIRFKFREGEIPRIY 202
               GNF V C     C+  + LP  I  ATVT  VC +C P  V+ I+FKFR+ EIP  +
Sbjct: 650  NRDGNFMVGCMGYPQCRNAIWLPGPIIEATVTTSVCNYCTPGPVYLIQFKFRQLEIPPGF 709

Query: 201  RSMHVGCI-VCDRLINQLKNLCGFG----------RSNGWTREDSPSGMVYCVKCKQSGH 55
               H+GCI  CD  + QL ++CG G           +     + S +    CV C Q+GH
Sbjct: 710  SVNHLGCIGGCDDTLRQLTDICGTGSRVQARARAPNTTPSNSQQSNTRFATCVHCHQTGH 769

Query: 54   VFSEC 40
               +C
Sbjct: 770  ASIDC 774


>ref|XP_002864876.1| hypothetical protein ARALYDRAFT_496584 [Arabidopsis lyrata subsp.
            lyrata] gi|297310711|gb|EFH41135.1| hypothetical protein
            ARALYDRAFT_496584 [Arabidopsis lyrata subsp. lyrata]
          Length = 923

 Score =  182 bits (462), Expect = 1e-43
 Identities = 114/310 (36%), Positives = 160/310 (51%), Gaps = 28/310 (9%)
 Frame = -2

Query: 873  SEIPKYYTGQMLTPIW-ALVPGTTXXXXXXXXXXXLDYMIKEGTGTDSTMHIHVEKCLD- 700
            S IP Y  GQ   P    L    T           L  M K G GTD+TMH H++K LD 
Sbjct: 475  SVIPVYEKGQQFIPTTLTLDSAVTRPPPLLCEADLLSCMDKAGIGTDATMHDHIKKLLDR 534

Query: 699  GYATRDVNMLLTPTDLGQALVKGYHDMGYKLKQANLD--MEKDMQDIRTQTRRKADVLKD 526
            GYAT+D N   +PT+LG+ALV GY DMGY+L + NL   ME+DM ++    + KA+VL+ 
Sbjct: 535  GYATKDANTRFSPTNLGEALVMGYDDMGYELWKPNLRALMERDMNEVSVGRKTKAEVLET 594

Query: 525  CLEQAETSYKEVTENRMALIQAGETFLGKKSN-----------CVRRCSTCDESEMVLQT 379
            CL+Q +  + +    +  L++A   F  + +N            +RRC+ C+ES+M L+ 
Sbjct: 595  CLQQMKACFLDARVKKSKLLEAMTIFFERSNNTDESESQTAGEVIRRCNLCNESDMALRK 654

Query: 378  RDGGNFEVACAR-ANCKGVVKLPSCIETATVTDQVCEFCVPRKVFKIRFKFREGEIPRIY 202
               GNF V C     C+  V LP     A+VT  VC+ C P  V+KI FKFR+  IP  +
Sbjct: 655  NRDGNFMVGCMNYPQCRNAVWLPGPTLEASVTTDVCQTCGPGPVYKILFKFRQIGIPPGF 714

Query: 201  RSMHVGCI-VCDRLINQLKNLCGFGRSNGWTREDS--PSGMV---------YCVKCKQSG 58
               H+GCI  CD ++ QL ++CG G  +   R     PS  +         +C+ C+Q G
Sbjct: 715  DVNHLGCIGGCDDILKQLIDICGTGSRSQARRAPGTVPSNNIQGSNTRQGNFCIHCQQRG 774

Query: 57   HVFSECTQPA 28
            H  + C   A
Sbjct: 775  HASANCPSRA 784