BLASTX nr result

ID: Papaver22_contig00027322 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Papaver22_contig00027322
         (766 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002276647.1| PREDICTED: chlorophyll a-b binding protein o...   320   2e-85
ref|XP_002307004.1| light-harvesting complex II protein Lhcb7 [P...   315   7e-84
ref|XP_004169873.1| PREDICTED: chlorophyll a-b binding protein o...   309   4e-82
ref|XP_004145567.1| PREDICTED: chlorophyll a-b binding protein o...   309   4e-82
ref|XP_002510744.1| chlorophyll A/B binding protein, putative [R...   308   8e-82

>ref|XP_002276647.1| PREDICTED: chlorophyll a-b binding protein of LHCII type I,
           chloroplastic [Vitis vinifera]
           gi|297745621|emb|CBI40786.3| unnamed protein product
           [Vitis vinifera]
          Length = 331

 Score =  320 bits (820), Expect = 2e-85
 Identities = 146/187 (78%), Positives = 170/187 (90%)
 Frame = +1

Query: 205 CRSSWQEIAGVVIFSAIPFTAVKAIANSSIGQTLQSRMRITKNASLQNSSYFKDLADKAR 384
           C++SWQE+AGV+IFSAIPFTAVKAIANS +G++LQSRM   K A+++NSS FK LA+KA+
Sbjct: 45  CKASWQELAGVLIFSAIPFTAVKAIANSPLGESLQSRMEENKKAAVKNSSKFKALAEKAK 104

Query: 385 QASFWYGEDRPRWLGPIPFEYPSYLSGELPGDYGFDIAGLSKDPVAFQKYFNFEILHARW 564
             S WYGE+RPRWLGPIP++YP+YL+GELPGDYGFDIAGL KDPVAFQKYFNFEILHARW
Sbjct: 105 NESLWYGEERPRWLGPIPYDYPAYLTGELPGDYGFDIAGLGKDPVAFQKYFNFEILHARW 164

Query: 565 AMLGALGALIPELLDLSGVIHFVEPIWWKVGYAKLQGDTLDYLGIPGLHIAGSQGVLVIS 744
           AML ALGAL+PELLDL G  HFVEP+WW+VGY+KL+GDTLDYLGIPG H AGSQGV+VI+
Sbjct: 165 AMLAALGALLPELLDLLGAFHFVEPVWWRVGYSKLKGDTLDYLGIPGFHFAGSQGVIVIA 224

Query: 745 ICQALLM 765
           ICQALLM
Sbjct: 225 ICQALLM 231


>ref|XP_002307004.1| light-harvesting complex II protein Lhcb7 [Populus trichocarpa]
           gi|222856453|gb|EEE94000.1| light-harvesting complex II
           protein Lhcb7 [Populus trichocarpa]
          Length = 338

 Score =  315 bits (807), Expect = 7e-84
 Identities = 143/188 (76%), Positives = 169/188 (89%)
 Frame = +1

Query: 202 ICRSSWQEIAGVVIFSAIPFTAVKAIANSSIGQTLQSRMRITKNASLQNSSYFKDLADKA 381
           IC++SWQE+AGVVIFSAIPFTAVKAIANS +G++LQ R+   K  ++Q SS FK LA KA
Sbjct: 51  ICKASWQELAGVVIFSAIPFTAVKAIANSPLGESLQRRLEERKKLAVQQSSKFKALAQKA 110

Query: 382 RQASFWYGEDRPRWLGPIPFEYPSYLSGELPGDYGFDIAGLSKDPVAFQKYFNFEILHAR 561
           R+ SFWYGE+RPRWLGPI ++YP+YLSGELPGDYGFD+AGL++DPVAFQ+YFNFEILHAR
Sbjct: 111 RKESFWYGEERPRWLGPISYQYPTYLSGELPGDYGFDVAGLAEDPVAFQRYFNFEILHAR 170

Query: 562 WAMLGALGALIPELLDLSGVIHFVEPIWWKVGYAKLQGDTLDYLGIPGLHIAGSQGVLVI 741
           WAML ALGALIPE+LDLSG  HF+EP+WW+VGY+KL+GDTLDYLGIPGLH AG QGVLVI
Sbjct: 171 WAMLAALGALIPEVLDLSGAFHFIEPVWWRVGYSKLKGDTLDYLGIPGLHFAGGQGVLVI 230

Query: 742 SICQALLM 765
           + CQA+LM
Sbjct: 231 AFCQAILM 238


>ref|XP_004169873.1| PREDICTED: chlorophyll a-b binding protein of LHCII type I,
           chloroplastic-like [Cucumis sativus]
          Length = 338

 Score =  309 bits (792), Expect = 4e-82
 Identities = 139/187 (74%), Positives = 170/187 (90%)
 Frame = +1

Query: 205 CRSSWQEIAGVVIFSAIPFTAVKAIANSSIGQTLQSRMRITKNASLQNSSYFKDLADKAR 384
           CR+SWQE+AGV+IFSAIPFTAVKAIANS +G +LQ ++   KN+++ NSS FK LA++AR
Sbjct: 49  CRASWQELAGVLIFSAIPFTAVKAIANSPLGGSLQRQLEKKKNSAVANSSKFKALAEEAR 108

Query: 385 QASFWYGEDRPRWLGPIPFEYPSYLSGELPGDYGFDIAGLSKDPVAFQKYFNFEILHARW 564
           + S WYGE+RPRWLGP+P++YP YL+GELPGDYGFDIAGLS+DPVAFQK+FNFEILHARW
Sbjct: 109 KDSSWYGEERPRWLGPLPYDYPKYLTGELPGDYGFDIAGLSEDPVAFQKFFNFEILHARW 168

Query: 565 AMLGALGALIPELLDLSGVIHFVEPIWWKVGYAKLQGDTLDYLGIPGLHIAGSQGVLVIS 744
           AML +LGAL+PE+LD+ G  HF EPIWW+VGY+KL+GDTLDYLGIPGLH+AGSQGV+VI+
Sbjct: 169 AMLASLGALVPEILDIFGAFHFTEPIWWRVGYSKLKGDTLDYLGIPGLHLAGSQGVIVIA 228

Query: 745 ICQALLM 765
           ICQA+LM
Sbjct: 229 ICQAILM 235


>ref|XP_004145567.1| PREDICTED: chlorophyll a-b binding protein of LHCII type I,
           chloroplastic-like [Cucumis sativus]
          Length = 338

 Score =  309 bits (792), Expect = 4e-82
 Identities = 139/187 (74%), Positives = 170/187 (90%)
 Frame = +1

Query: 205 CRSSWQEIAGVVIFSAIPFTAVKAIANSSIGQTLQSRMRITKNASLQNSSYFKDLADKAR 384
           CR+SWQE+AGV+IFSAIPFTAVKAIANS +G +LQ ++   KN+++ NSS FK LA++AR
Sbjct: 49  CRASWQELAGVLIFSAIPFTAVKAIANSPLGGSLQRQLEKKKNSAVANSSKFKALAEEAR 108

Query: 385 QASFWYGEDRPRWLGPIPFEYPSYLSGELPGDYGFDIAGLSKDPVAFQKYFNFEILHARW 564
           + S WYGE+RPRWLGP+P++YP YL+GELPGDYGFDIAGLS+DPVAFQK+FNFEILHARW
Sbjct: 109 KDSSWYGEERPRWLGPLPYDYPKYLTGELPGDYGFDIAGLSEDPVAFQKFFNFEILHARW 168

Query: 565 AMLGALGALIPELLDLSGVIHFVEPIWWKVGYAKLQGDTLDYLGIPGLHIAGSQGVLVIS 744
           AML +LGAL+PE+LD+ G  HF EPIWW+VGY+KL+GDTLDYLGIPGLH+AGSQGV+VI+
Sbjct: 169 AMLASLGALVPEILDIFGAFHFTEPIWWRVGYSKLKGDTLDYLGIPGLHLAGSQGVIVIA 228

Query: 745 ICQALLM 765
           ICQA+LM
Sbjct: 229 ICQAILM 235


>ref|XP_002510744.1| chlorophyll A/B binding protein, putative [Ricinus communis]
           gi|223551445|gb|EEF52931.1| chlorophyll A/B binding
           protein, putative [Ricinus communis]
          Length = 329

 Score =  308 bits (789), Expect = 8e-82
 Identities = 138/187 (73%), Positives = 168/187 (89%)
 Frame = +1

Query: 205 CRSSWQEIAGVVIFSAIPFTAVKAIANSSIGQTLQSRMRITKNASLQNSSYFKDLADKAR 384
           C++SWQE+AGV++FSAIPFTAVKA+ANS +G++LQ R+  +K  +++ SS F+ L  KAR
Sbjct: 43  CKASWQELAGVLVFSAIPFTAVKALANSPLGESLQRRLEESKKVAVKESSKFQALTAKAR 102

Query: 385 QASFWYGEDRPRWLGPIPFEYPSYLSGELPGDYGFDIAGLSKDPVAFQKYFNFEILHARW 564
           + S WYGE+RPRWLGPIP++YP+YL+GELPGDYGFD+AGLSKD VAFQ+YFNFEILHARW
Sbjct: 103 KESLWYGEERPRWLGPIPYDYPAYLTGELPGDYGFDVAGLSKDSVAFQRYFNFEILHARW 162

Query: 565 AMLGALGALIPELLDLSGVIHFVEPIWWKVGYAKLQGDTLDYLGIPGLHIAGSQGVLVIS 744
           AML ALGAL PE+LDLSG  HF+EP+WW+VGY+KL+GDTLDYLGIPGLH AGSQGVLVI+
Sbjct: 163 AMLAALGALAPEVLDLSGAFHFIEPVWWRVGYSKLKGDTLDYLGIPGLHFAGSQGVLVIA 222

Query: 745 ICQALLM 765
           ICQALLM
Sbjct: 223 ICQALLM 229


Top