BLASTX nr result

ID: Papaver22_contig00027142 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Papaver22_contig00027142
         (1175 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|ABD28730.1| Ribonuclease H [Medicago truncatula]                    76   1e-18
ref|XP_003621690.1| Cytochrome c biogenesis protein ccsA [Medica...    79   3e-14
emb|CCA65995.1| hypothetical protein [Beta vulgaris subsp. vulga...    70   1e-09
emb|CAN64468.1| hypothetical protein VITISV_036942 [Vitis vinifera]    50   2e-09
emb|CAN68220.1| hypothetical protein VITISV_005372 [Vitis vinifera]    52   2e-09

>gb|ABD28730.1| Ribonuclease H [Medicago truncatula]
          Length = 409

 Score = 76.3 bits (186), Expect(2) = 1e-18
 Identities = 71/274 (25%), Positives = 110/274 (40%), Gaps = 8/274 (2%)
 Frame = +1

Query: 376  CYICKEKEETLDHLLWSCEFSVKLWQWMGNLFKFRNPSSFHDILGFAKHKSPVIQELWIA 555
            C  C+++ ET  H+   C  +++LW W+  L        F  IL  ++    ++Q +  +
Sbjct: 114  CCFCRKQAETSSHIFLQCPVTLQLWDWL--LKATDQHLDFSSILNISR----MVQHVMNS 167

Query: 556  DACLILREIWFYRNNIFFEEETGSLDXXXXXXXXXXXESEFRL---SGYMKNEDYDLQIL 726
                I+  IW   NN +F+     +               F L    G    +D+ L  L
Sbjct: 168  AIVHIMWSIWLECNNKYFDGVQKPMSTLFNTILAEVLRLSFMLDIVKGASSMQDFKLARL 227

Query: 727  SFFGLKYRKTYSIKVMELHFTLPNSSTVLICCDGASKGNPGTSGYGFLARKGMD-FLIAV 903
              F + ++        E+ +  P+   + I CDG+  G+P     G + R     F  A 
Sbjct: 228  --FSIPFKTNRVNPCREIIWVPPHGGCMKINCDGSVVGSPSCGSIGVIFRASQTMFCGAF 285

Query: 904  EGGVGITTNYYAEIMAIICAGEWAIQNKHLQICIRSDSKATVLAF-TNNKLPWFVTSRWN 1080
               +G  T   AE  A + A E A +     I I +DS   + AF  N  +PW +  RW+
Sbjct: 286  AQNIGYATALEAEYSACMFAIEKAKELHLTNIWIETDSVNVIRAFHFNTGVPWKMHIRWH 345

Query: 1081 QVCAKFTKIEYE---HCYREINFGADDLAKEGSG 1173
              C  F +       H  RE N  AD LAK G G
Sbjct: 346  N-CLLFCRSIRSLCTHVNREGNLVADALAKNGQG 378



 Score = 43.9 bits (102), Expect(2) = 1e-18
 Identities = 29/111 (26%), Positives = 50/111 (45%), Gaps = 10/111 (9%)
 Frame = +3

Query: 57  LKVSSLIVNGVWNIPTEYLDFFEVQELPMVDGLS----------DKQIWSGTNSGKFNVS 206
           +KV++ +VNG W +     DFF  ++  +V+ +           DK IW+ +  G  +  
Sbjct: 1   MKVANYLVNGEWILS----DFFAYKDNALVEKIHQIALPLDETLDKLIWTDSVDGDLSNK 56

Query: 207 LATQCIRKKFPIMIDIKKLWQACVHPTVKGAVWKIVRDICATDEKNKE*GC 359
           LA   +    P +   K LW A   PT     W+ + +   TD+  ++ GC
Sbjct: 57  LAFSFLPGHGPTVHWAKMLWNAYTPPTGAFITWRFLHNKLPTDDNLRKRGC 107


>ref|XP_003621690.1| Cytochrome c biogenesis protein ccsA [Medicago truncatula]
            gi|355496705|gb|AES77908.1| Cytochrome c biogenesis
            protein ccsA [Medicago truncatula]
          Length = 666

 Score = 79.0 bits (193), Expect(2) = 3e-14
 Identities = 75/296 (25%), Positives = 117/296 (39%), Gaps = 17/296 (5%)
 Frame = +1

Query: 337  KKIKNKGVQMASRCYICKEKEETLDHLLWSCEFSVKLWQWMG-NLFKFRNPSSFHDIL-- 507
            + ++ +G  + S C  C +  E+  H+ + C  + +LW W+G    K  + SS   +L  
Sbjct: 65   ENLRKRGCLIVSICCFCMKSAESSQHIFFECHVTSRLWDWLGKGTDKLLDCSSCLQLLIR 124

Query: 508  --GFAKH------KSPVIQELWIADACLILREIWFYRNNIFFEEETGSLDXXXXXXXXXX 663
              G           S +I  +W          IW  RN   F  +  ++           
Sbjct: 125  NWGSGSKLVNNILNSAIIHTIW---------SIWIERNQRCFHNKHQAMTTLFNIILAEV 175

Query: 664  XESEFRLSGYMKNED-YDLQILSFFGLKYRKTYSIKVMELHFTLPNSSTVLICCDGASKG 840
              S F L     N    D ++   F + ++       +++ +  P    V I CDG+S G
Sbjct: 176  KMS-FSLCMIKGNSAMQDYKVAKLFNIPFKVKRVTPHLDIIWKPPIGDIVKINCDGSSVG 234

Query: 841  NPGTSGYGFLAR-KGMDFLIAVEGGVGITTNYYAEIMAIICAGEWAIQNKHLQICIRSDS 1017
                   G + R     FL A+   +G  T   AE  A + A E A + + + +C+ +DS
Sbjct: 235  RHPCGSIGIVIRDSNHHFLGAISSNIGNATPLEAEFCAGMMAMEKAQEMQLMHVCLETDS 294

Query: 1018 KATVLAFTNN-KLPWFVTSRWNQVCAKF---TKIEYEHCYREINFGADDLAKEGSG 1173
               V AF     +PW + +RW Q C  F         H  RE N  AD LAK G G
Sbjct: 295  LKVVNAFNKGLGVPWQMRARW-QNCWDFCDSISCSCVHILREGNMVADALAKHGQG 349



 Score = 26.6 bits (57), Expect(2) = 3e-14
 Identities = 10/35 (28%), Positives = 19/35 (54%)
 Frame = +3

Query: 255 KKLWQACVHPTVKGAVWKIVRDICATDEKNKE*GC 359
           K LW + + P+     W+++ +   TDE  ++ GC
Sbjct: 38  KFLWNSYIPPSRSFITWRLLHNKLPTDENLRKRGC 72


>emb|CCA65995.1| hypothetical protein [Beta vulgaris subsp. vulgaris]
          Length = 1389

 Score = 70.1 bits (170), Expect = 1e-09
 Identities = 65/294 (22%), Positives = 132/294 (44%), Gaps = 18/294 (6%)
 Frame = +1

Query: 340  KIKNKGVQMASRCYICKEKEETLDHLLWSCEFSVKLWQWMGNLFKFRNPSSFHDILGFAK 519
            +++   + +   C  C    ET+ HL + C F++ ++  + + F++    S+   L  + 
Sbjct: 1078 RLERSHIFVPQNCCFCDCPSETICHLCFQCPFTLDIYSHLEDKFQWPAYPSWFSTLQLSS 1137

Query: 520  HKSPV------IQELWIADACLILREIWFYRNNIFFEEETGSLDXXXXXXXXXXXESEFR 681
             +S +      +   ++    ++   +W++RN + F  E+ S             ++ F 
Sbjct: 1138 FRSVLEACHINLTLEYLTKLSIVWWHVWYFRNKLIFNNESTSFS-----------QASFI 1186

Query: 682  LSGYM-KNEDYDLQILSFFGLKYRKTYSIKVME---LHFTLPNSSTVLICCDGASKGNPG 849
            +  +M K E  +L+I SF      K   + V     L ++ PN   + +  DG+   N G
Sbjct: 1187 IHSFMGKWEKANLEIPSF-NTPLPKDCKLPVRSGKNLIWSPPNEDVLKVNFDGSKLDN-G 1244

Query: 850  TSGYGFLARKGM-DFLIAVEGGVGITTNYY-AEIMAII--CAGEWAIQNKHLQICIRSDS 1017
             + YGF+ R    + L+A    +G+  +   AE M ++    G  ++QN   +I    D+
Sbjct: 1245 QAAYGFVIRNSNGEVLMARAKALGVYPSILMAEAMGLLEGIKGAISLQNWSRKIIFEGDN 1304

Query: 1018 KATVLAFTNNKL-PWFVTS---RWNQVCAKFTKIEYEHCYREINFGADDLAKEG 1167
             A + A + +   PW + +       +   F +++++HCYRE N  AD +A +G
Sbjct: 1305 IAVINAMSPSATGPWTIANIILDAGALLGHFQEVKFQHCYREANRLADFMAHKG 1358


>emb|CAN64468.1| hypothetical protein VITISV_036942 [Vitis vinifera]
          Length = 1539

 Score = 50.4 bits (119), Expect(2) = 2e-09
 Identities = 28/101 (27%), Positives = 51/101 (50%)
 Frame = +1

Query: 328 LLMKKIKNKGVQMASRCYICKEKEETLDHLLWSCEFSVKLWQWMGNLFKFRNPSSFHDIL 507
           L + +++ +G  +A+RCY+C+  EE++DH+L  CE      +W+ +       S ++   
Sbjct: 298 LTLDQLQRRGWALANRCYLCQRHEESIDHILLHCE------KWVLSATVKETFSGWNGSF 351

Query: 508 GFAKHKSPVIQELWIADACLILREIWFYRNNIFFEEETGSL 630
              K K     ++W A    +   +W  RN + FEEE  S+
Sbjct: 352 VGKKRK-----DVWKASPLCLFWTVWKTRNKVAFEEEELSI 387



 Score = 38.5 bits (88), Expect(2) = 2e-09
 Identities = 19/73 (26%), Positives = 30/73 (41%)
 Frame = +3

Query: 90  WNIPTEYLDFFEVQELPMVDGLSDKQIWSGTNSGKFNVSLATQCIRKKFPIMIDIKKLWQ 269
           W +      F  +    +  G+ D+ IW  TN GKF+V    + +    PI      +W+
Sbjct: 219 WELEEVCSFFVALNRKQIQQGVDDRVIWRETNCGKFSVKSLYKSLVSGHPISFPSSAIWK 278

Query: 270 ACVHPTVKGAVWK 308
             V P V    W+
Sbjct: 279 VTVQPRVSFFGWE 291


>emb|CAN68220.1| hypothetical protein VITISV_005372 [Vitis vinifera]
          Length = 577

 Score = 52.0 bits (123), Expect(2) = 2e-09
 Identities = 29/108 (26%), Positives = 58/108 (53%), Gaps = 7/108 (6%)
 Frame = +1

Query: 328 LLMKKIKNKGVQMASRCYICKEKEETLDHLLWSCEFSVKLWQWMGNLF--KFRNPSSFHD 501
           L + +++ +G  +A+RCY+C+  EE++DH+L  C+ +  LW  + ++F  ++  P+   +
Sbjct: 456 LTLDQLQRRGWALANRCYLCQRHEESIDHILLHCDKARTLWVLLFSMFGVQWVLPAMVKE 515

Query: 502 ILG-----FAKHKSPVIQELWIADACLILREIWFYRNNIFFEEETGSL 630
           +L      F   K    + +W A    +   +W  RN + F+EE  S+
Sbjct: 516 MLSGWNGTFVGKKR---KGVWKASPLCLFWTVWKTRNKVAFKEEELSI 560



 Score = 37.0 bits (84), Expect(2) = 2e-09
 Identities = 17/73 (23%), Positives = 29/73 (39%)
 Frame = +3

Query: 90  WNIPTEYLDFFEVQELPMVDGLSDKQIWSGTNSGKFNVSLATQCIRKKFPIMIDIKKLWQ 269
           W +      F  +    +  G+ D+ IW  TN GKF++    + +    P       +W+
Sbjct: 377 WELEEVXSFFVXLNRKXIXQGVDDRVIWRETNCGKFSIKSLYKSLVSGHPTSFPSSAIWK 436

Query: 270 ACVHPTVKGAVWK 308
             V P V    W+
Sbjct: 437 VSVQPRVSFFGWE 449


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