BLASTX nr result

ID: Papaver22_contig00026731 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Papaver22_contig00026731
         (827 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CAN69960.1| hypothetical protein VITISV_032887 [Vitis vinifera]   199   5e-49
ref|XP_002267809.2| PREDICTED: pentatricopeptide repeat-containi...   199   6e-49
ref|XP_003626687.1| Pentatricopeptide repeat-containing protein ...   182   1e-43
ref|XP_002306437.1| predicted protein [Populus trichocarpa] gi|2...   177   3e-42
ref|XP_002521681.1| pentatricopeptide repeat-containing protein,...   171   1e-40

>emb|CAN69960.1| hypothetical protein VITISV_032887 [Vitis vinifera]
          Length = 472

 Score =  199 bits (507), Expect = 5e-49
 Identities = 104/187 (55%), Positives = 131/187 (70%), Gaps = 2/187 (1%)
 Frame = +2

Query: 272 TKNSLQP--SPSTKPIFTSRSLTDAKKTFDYILSTSPFPLDTRHNNSLLESYTQVATLDD 445
           TK +  P   P +  IF S +L DAKK F  I +TS  PLD R +N+LL+SY+ ++T++D
Sbjct: 53  TKKTRTPIEDPKSPVIFNSPNLLDAKKLFASITTTSTTPLDLRFHNALLQSYSSISTVND 112

Query: 446 SISFLAHMRMKQPSFSPDSSTYNVMLCQSCKFHLSFVDDLSIVRKVLGFMAADGFSPGHG 625
           SISFL HM   QPSFSP+ STY+++L QSCK   S   DLS V + L  M   GF P   
Sbjct: 113 SISFLRHMIKSQPSFSPERSTYHILLSQSCKSPNS---DLSAVHQTLNLMVTHGFPPDRV 169

Query: 626 TVDLVVRSLCSVGREERAILLVKELSAKYSPPDIFTYNFLIRHLCKTMSIDSVYGFIDEM 805
           T D+ VRSLCS GREE AI LVKELS K+SPPD FTYNF+IRHLCKT ++ +VY FIDE+
Sbjct: 170 TTDIAVRSLCSAGREEHAIELVKELSLKHSPPDSFTYNFIIRHLCKTRALSTVYNFIDEL 229

Query: 806 RDSFSMK 826
           ++SF +K
Sbjct: 230 QNSFQLK 236



 Score = 58.5 bits (140), Expect = 2e-06
 Identities = 42/156 (26%), Positives = 73/156 (46%)
 Frame = +2

Query: 311 IFTSRSLTDAKKTFDYILSTSPFPLDTRHNNSLLESYTQVATLDDSISFLAHMRMKQPSF 490
           +   ++L +A +  + +L  + F  D    N++++ Y  +    ++I    + +MK+   
Sbjct: 249 VCNGKNLREATRLLE-VLGEAGFKPDCYVYNTIMKGYCILDKGSEAIG--VYKKMKEEGV 305

Query: 491 SPDSSTYNVMLCQSCKFHLSFVDDLSIVRKVLGFMAADGFSPGHGTVDLVVRSLCSVGRE 670
            PD  TYN ++     F LS    +   RK L  MA  G  P   T   ++  LC  G  
Sbjct: 306 EPDLVTYNTLI-----FGLSKSGRVKEARKFLDIMAEMGHFPDAVTYTSLMNGLCREGNA 360

Query: 671 ERAILLVKELSAKYSPPDIFTYNFLIRHLCKTMSID 778
             A+ L++E+ AK   P+  TYN L+  LCK   ++
Sbjct: 361 LGALALLEEMEAKGCSPNSCTYNTLLHGLCKLRMLE 396


>ref|XP_002267809.2| PREDICTED: pentatricopeptide repeat-containing protein
           At2g17670-like [Vitis vinifera]
          Length = 458

 Score =  199 bits (506), Expect = 6e-49
 Identities = 104/187 (55%), Positives = 131/187 (70%), Gaps = 2/187 (1%)
 Frame = +2

Query: 272 TKNSLQP--SPSTKPIFTSRSLTDAKKTFDYILSTSPFPLDTRHNNSLLESYTQVATLDD 445
           TK +  P   P +  IF S +L DAKK F  I +TS  PLD R +N+LL+SY+ ++T++D
Sbjct: 121 TKKTRTPIEDPKSPVIFNSPNLLDAKKLFASITTTSTTPLDFRFHNALLQSYSSISTVND 180

Query: 446 SISFLAHMRMKQPSFSPDSSTYNVMLCQSCKFHLSFVDDLSIVRKVLGFMAADGFSPGHG 625
           SISFL HM   QPSFSP+ STY+++L QSCK   S   DLS V + L  M   GF P   
Sbjct: 181 SISFLRHMIKSQPSFSPERSTYHILLSQSCKSPNS---DLSAVHQTLNLMVTHGFPPDRV 237

Query: 626 TVDLVVRSLCSVGREERAILLVKELSAKYSPPDIFTYNFLIRHLCKTMSIDSVYGFIDEM 805
           T D+ VRSLCS GREE AI LVKELS K+SPPD FTYNF+IRHLCKT ++ +VY FIDE+
Sbjct: 238 TTDIAVRSLCSAGREEHAIELVKELSLKHSPPDSFTYNFIIRHLCKTRALSTVYNFIDEL 297

Query: 806 RDSFSMK 826
           ++SF +K
Sbjct: 298 QNSFQLK 304


>ref|XP_003626687.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
           gi|355520709|gb|AET01163.1| Pentatricopeptide
           repeat-containing protein [Medicago truncatula]
          Length = 501

 Score =  182 bits (461), Expect = 1e-43
 Identities = 87/188 (46%), Positives = 126/188 (67%)
 Frame = +2

Query: 263 KRTTKNSLQPSPSTKPIFTSRSLTDAKKTFDYILSTSPFPLDTRHNNSLLESYTQVATLD 442
           K+    S   SP    +F S +L +AK  F+  +++S  P+D+R +NSLL+SY  ++T++
Sbjct: 44  KQQQSQSQSQSPKPVSVFKSPNLQEAKSIFNSFVNSSNAPIDSRFHNSLLQSYASISTIN 103

Query: 443 DSISFLAHMRMKQPSFSPDSSTYNVMLCQSCKFHLSFVDDLSIVRKVLGFMAADGFSPGH 622
           DSI+FL HM    PSFSPD STY+++L   CK   S    LS++ + L  M +DG SP  
Sbjct: 104 DSIAFLRHMTKTHPSFSPDKSTYHILLTHCCKSTDSKYSTLSLIHQTLNLMVSDGISPDK 163

Query: 623 GTVDLVVRSLCSVGREERAILLVKELSAKYSPPDIFTYNFLIRHLCKTMSIDSVYGFIDE 802
           GTVDL VRSLC+  R + A+ L+KELS+K+  PDI++YNFL+++LCK+ ++  VY FIDE
Sbjct: 164 GTVDLAVRSLCTADRVDDAVELIKELSSKHCSPDIYSYNFLVKNLCKSRTLSLVYAFIDE 223

Query: 803 MRDSFSMK 826
           MR  F +K
Sbjct: 224 MRTKFDVK 231



 Score = 67.0 bits (162), Expect = 5e-09
 Identities = 51/188 (27%), Positives = 86/188 (45%), Gaps = 5/188 (2%)
 Frame = +2

Query: 260 DKRTTKNSLQPSPSTKPIF-----TSRSLTDAKKTFDYILSTSPFPLDTRHNNSLLESYT 424
           D+  TK  ++P+  T  I       +++L +A +  D IL    F  D    N++++ Y 
Sbjct: 222 DEMRTKFDVKPNLVTYTILIDNVCNTKNLREATRLVD-ILEEEGFKPDCFLYNTIMKGYC 280

Query: 425 QVATLDDSISFLAHMRMKQPSFSPDSSTYNVMLCQSCKFHLSFVDDLSIVRKVLGFMAAD 604
            ++   ++I    + RMK+    PD  TYN ++     F LS    +S  +K+L  MA  
Sbjct: 281 MLSRGSEAIE--VYNRMKEKGVEPDLITYNTLI-----FGLSKSGRVSEAKKLLRVMAEK 333

Query: 605 GFSPGHGTVDLVVRSLCSVGREERAILLVKELSAKYSPPDIFTYNFLIRHLCKTMSIDSV 784
           G  P   T   ++  +C  G    A+ L++E+  K   P+  TYN L+  LCK+   D  
Sbjct: 334 GHFPDEVTYTSLMNGMCRKGETLAALALLEEMEMKGCSPNTCTYNTLLHGLCKSRMFDKA 393

Query: 785 YGFIDEMR 808
                 M+
Sbjct: 394 MELYGAMK 401


>ref|XP_002306437.1| predicted protein [Populus trichocarpa] gi|222855886|gb|EEE93433.1|
           predicted protein [Populus trichocarpa]
          Length = 462

 Score =  177 bits (449), Expect = 3e-42
 Identities = 100/195 (51%), Positives = 127/195 (65%), Gaps = 7/195 (3%)
 Frame = +2

Query: 263 KRTTKNSLQPS-----PSTKPIFTSRSLTDAKKTFDYILSTSPFPL--DTRHNNSLLESY 421
           K T KNS +P      P  K +F + SL +AK  F+  +ST+  PL  + R +NS L+SY
Sbjct: 35  KLTKKNSPKPHETETPPPHKSLFKTSSLNEAKSLFNSFISTTKAPLLDNLRLHNSFLQSY 94

Query: 422 TQVATLDDSISFLAHMRMKQPSFSPDSSTYNVMLCQSCKFHLSFVDDLSIVRKVLGFMAA 601
           T ++TLDDSIS L HM    PS SPD STY+V+L QSC+   S    LS  +KVL  M  
Sbjct: 95  TSISTLDDSISLLDHMVKTLPSLSPDRSTYHVLLSQSCREPDS---SLSSAQKVLNLMIN 151

Query: 602 DGFSPGHGTVDLVVRSLCSVGREERAILLVKELSAKYSPPDIFTYNFLIRHLCKTMSIDS 781
            GF P   TVD+ +RSLCS GR + AILLVKE S+K+S PD FTYNFL++ LCK+   +S
Sbjct: 152 KGFKPNQFTVDVAIRSLCSAGRVDDAILLVKEFSSKHSKPDTFTYNFLVKCLCKSRIFNS 211

Query: 782 VYGFIDEMRDSFSMK 826
           VY FIDEM+ SF +K
Sbjct: 212 VYSFIDEMKSSFDIK 226


>ref|XP_002521681.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis] gi|223539072|gb|EEF40668.1| pentatricopeptide
           repeat-containing protein, putative [Ricinus communis]
          Length = 458

 Score =  171 bits (434), Expect = 1e-40
 Identities = 88/180 (48%), Positives = 124/180 (68%), Gaps = 1/180 (0%)
 Frame = +2

Query: 290 PSP-STKPIFTSRSLTDAKKTFDYILSTSPFPLDTRHNNSLLESYTQVATLDDSISFLAH 466
           P+P   K +F S  L +AK+ F+ ++ST+  PLD R ++S L+SY+ ++T+DDSIS L H
Sbjct: 46  PTPIQQKRLFKSPELNEAKEIFNSLISTTRVPLDLRFHHSFLQSYSSISTIDDSISLLRH 105

Query: 467 MRMKQPSFSPDSSTYNVMLCQSCKFHLSFVDDLSIVRKVLGFMAADGFSPGHGTVDLVVR 646
           M    PSF+P  STY+++L QSCK   +    LS V ++L  M  +GF P   TVD+ VR
Sbjct: 106 MIKTLPSFTPTISTYHILLSQSCK---APDPTLSPVHQILNLMVNNGFMPTQVTVDIAVR 162

Query: 647 SLCSVGREERAILLVKELSAKYSPPDIFTYNFLIRHLCKTMSIDSVYGFIDEMRDSFSMK 826
           +LCS G+E+ A+ LVKELS K+S PD FTYNFL++ LCK  ++ +VY FIDEMR SF ++
Sbjct: 163 ALCSAGKEDDAVKLVKELSLKHSKPDSFTYNFLVKCLCKCRALSNVYSFIDEMRSSFDLE 222


Top