BLASTX nr result

ID: Papaver22_contig00026713 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Papaver22_contig00026713
         (522 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002510662.1| ribosome biogenesis protein tsr1, putative [...   168   5e-40
ref|XP_002270499.1| PREDICTED: pre-rRNA-processing protein TSR1 ...   160   8e-38
gb|AAF24521.1|AC007534_2 F7F22.4 [Arabidopsis thaliana]               154   6e-36
ref|NP_564480.1| uncharacterized protein [Arabidopsis thaliana] ...   154   6e-36
ref|XP_002888409.1| hypothetical protein ARALYDRAFT_894100 [Arab...   154   7e-36

>ref|XP_002510662.1| ribosome biogenesis protein tsr1, putative [Ricinus communis]
           gi|223551363|gb|EEF52849.1| ribosome biogenesis protein
           tsr1, putative [Ricinus communis]
          Length = 792

 Score =  168 bits (425), Expect = 5e-40
 Identities = 91/144 (63%), Positives = 107/144 (74%), Gaps = 2/144 (1%)
 Frame = +3

Query: 78  NRIGKSDHHVGKGAKAARFHHTKMIRSQKRASLLEEKRASNGSGTPPRVIVLFGLTKSAN 257
           NRI KS+ +  KGA+A R    KM+R QKRA+LL+EKRAS GS +PPRVIVLFGL+ S N
Sbjct: 33  NRIAKSERNAAKGARAVRIQRNKMLREQKRAALLKEKRASGGSSSPPRVIVLFGLSASVN 92

Query: 258 VRGLKEQLVRLLSP--ADANKTTVASPRYKIRATVLEAPHGDLSTCMELAKVADLIAFVA 431
           +  L E L++LLSP    A  +TVAS  YK+RATVL+APHGDL +CME+AKVADLIAFVA
Sbjct: 93  IDSLAEDLLQLLSPEGGAAVSSTVASSEYKMRATVLKAPHGDLLSCMEMAKVADLIAFVA 152

Query: 432 SARSSSKEVDTCSYIDSFGSQCLS 503
           SA     E     YIDSFGSQCLS
Sbjct: 153 SA----SEESASDYIDSFGSQCLS 172


>ref|XP_002270499.1| PREDICTED: pre-rRNA-processing protein TSR1 homolog [Vitis
           vinifera] gi|297745545|emb|CBI40710.3| unnamed protein
           product [Vitis vinifera]
          Length = 801

 Score =  160 bits (406), Expect = 8e-38
 Identities = 86/144 (59%), Positives = 108/144 (75%), Gaps = 2/144 (1%)
 Frame = +3

Query: 78  NRIGKSDHHVGKGAKAARFHHTKMIRSQKRASLLEEKRASNGSGTPPRVIVLFGLTKSAN 257
           +RI K   +V KGAKAAR    KMIR QKRA++L+EKRAS+GS +PPRVIV+FGL+ S N
Sbjct: 33  SRITKPGSNVAKGAKAARLQRNKMIRDQKRAAILKEKRASSGSTSPPRVIVIFGLSASVN 92

Query: 258 VRGLKEQLVRLLSPADANK--TTVASPRYKIRATVLEAPHGDLSTCMELAKVADLIAFVA 431
           V  +++ L+ LLS        +TVAS  YK+R TVL+APHGDLS+C+E+ KVADLIAFVA
Sbjct: 93  VNSVEDDLLTLLSSKGNEPVFSTVASSEYKLRTTVLKAPHGDLSSCIEMVKVADLIAFVA 152

Query: 432 SARSSSKEVDTCSYIDSFGSQCLS 503
           SA  S +E  +  YIDSFG+QCLS
Sbjct: 153 SASCSCEEGTSNYYIDSFGTQCLS 176


>gb|AAF24521.1|AC007534_2 F7F22.4 [Arabidopsis thaliana]
          Length = 813

 Score =  154 bits (390), Expect = 6e-36
 Identities = 86/143 (60%), Positives = 108/143 (75%), Gaps = 2/143 (1%)
 Frame = +3

Query: 81  RIGKSDHHVGKGAKAARFHHTKMIRSQKRASLLEEKRASNGSGTPPRVIVLFGLTKSANV 260
           RIGKSD +  KGAKAAR    KM+R QKRA++L+EKRAS G  + PRVIVLF L+ S  +
Sbjct: 34  RIGKSDSNYVKGAKAARVQRGKMLREQKRAAVLKEKRASGGINSAPRVIVLFPLSASVEL 93

Query: 261 RGLKEQLVRLLSPADAN--KTTVASPRYKIRATVLEAPHGDLSTCMELAKVADLIAFVAS 434
             L E +++LLS   +    +TVAS  YK+RATVL+APHGDL TCME+AKVADL+AFVAS
Sbjct: 94  NSLGEDVLKLLSSDGSGIASSTVASSEYKLRATVLKAPHGDLLTCMEMAKVADLMAFVAS 153

Query: 435 ARSSSKEVDTCSYIDSFGSQCLS 503
           A S+  E ++ ++IDSFGSQCLS
Sbjct: 154 A-SAPWEENSSNFIDSFGSQCLS 175


>ref|NP_564480.1| uncharacterized protein [Arabidopsis thaliana]
           gi|13605690|gb|AAK32838.1|AF361826_1 At1g42440/F7F22_7
           [Arabidopsis thaliana] gi|22137072|gb|AAM91381.1|
           At1g42440/F7F22_7 [Arabidopsis thaliana]
           gi|23397226|gb|AAN31895.1| unknown protein [Arabidopsis
           thaliana] gi|332193797|gb|AEE31918.1| uncharacterized
           protein [Arabidopsis thaliana]
          Length = 793

 Score =  154 bits (390), Expect = 6e-36
 Identities = 86/143 (60%), Positives = 108/143 (75%), Gaps = 2/143 (1%)
 Frame = +3

Query: 81  RIGKSDHHVGKGAKAARFHHTKMIRSQKRASLLEEKRASNGSGTPPRVIVLFGLTKSANV 260
           RIGKSD +  KGAKAAR    KM+R QKRA++L+EKRAS G  + PRVIVLF L+ S  +
Sbjct: 34  RIGKSDSNYVKGAKAARVQRGKMLREQKRAAVLKEKRASGGINSAPRVIVLFPLSASVEL 93

Query: 261 RGLKEQLVRLLSPADAN--KTTVASPRYKIRATVLEAPHGDLSTCMELAKVADLIAFVAS 434
             L E +++LLS   +    +TVAS  YK+RATVL+APHGDL TCME+AKVADL+AFVAS
Sbjct: 94  NSLGEDVLKLLSSDGSGIASSTVASSEYKLRATVLKAPHGDLLTCMEMAKVADLMAFVAS 153

Query: 435 ARSSSKEVDTCSYIDSFGSQCLS 503
           A S+  E ++ ++IDSFGSQCLS
Sbjct: 154 A-SAPWEENSSNFIDSFGSQCLS 175


>ref|XP_002888409.1| hypothetical protein ARALYDRAFT_894100 [Arabidopsis lyrata subsp.
           lyrata] gi|297334250|gb|EFH64668.1| hypothetical protein
           ARALYDRAFT_894100 [Arabidopsis lyrata subsp. lyrata]
          Length = 792

 Score =  154 bits (389), Expect = 7e-36
 Identities = 88/144 (61%), Positives = 108/144 (75%), Gaps = 3/144 (2%)
 Frame = +3

Query: 81  RIGKSD-HHVGKGAKAARFHHTKMIRSQKRASLLEEKRASNGSGTPPRVIVLFGLTKSAN 257
           RIGKSD ++  KGAKAARF   KM+R QKRA++L+EKRAS G  + PRVIVLF L+ S  
Sbjct: 34  RIGKSDSNNYVKGAKAARFQRGKMLREQKRATVLKEKRASGGLNSAPRVIVLFPLSASVE 93

Query: 258 VRGLKEQLVRLLSP--ADANKTTVASPRYKIRATVLEAPHGDLSTCMELAKVADLIAFVA 431
           +  L E L+ LLS   +    +TVAS  YK++ATVL+APHGDL TCME+AKVADL+AFVA
Sbjct: 94  LDSLNEDLLELLSSDGSGVTSSTVASSEYKLKATVLKAPHGDLLTCMEMAKVADLMAFVA 153

Query: 432 SARSSSKEVDTCSYIDSFGSQCLS 503
           SA SS  E +  +YIDSFG+QCLS
Sbjct: 154 SA-SSPWEENKSNYIDSFGNQCLS 176


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