BLASTX nr result

ID: Papaver22_contig00026572 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Papaver22_contig00026572
         (662 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003634360.1| PREDICTED: uncharacterized RNA-binding prote...    61   1e-13
ref|XP_002284337.2| PREDICTED: uncharacterized RNA-binding prote...    61   1e-13
emb|CBI19566.3| unnamed protein product [Vitis vinifera]               61   1e-13
ref|XP_003549410.1| PREDICTED: RNA-binding post-transcriptional ...    60   2e-13
ref|XP_003603009.1| RNA-binding protein [Medicago truncatula] gi...    60   2e-13

>ref|XP_003634360.1| PREDICTED: uncharacterized RNA-binding protein C23E6.01c-like
           isoform 2 [Vitis vinifera]
          Length = 418

 Score = 60.8 bits (146), Expect(2) = 1e-13
 Identities = 27/37 (72%), Positives = 32/37 (86%)
 Frame = -2

Query: 598 QKHAEEARGKLNGTTVGKQTVSLSWGRNPSNKQMRAD 488
           + +AE+A  KLNGT +GKQTV LSWGRNP+NKQMRAD
Sbjct: 333 RNNAEDALQKLNGTVIGKQTVRLSWGRNPANKQMRAD 369



 Score = 41.2 bits (95), Expect(2) = 1e-13
 Identities = 18/23 (78%), Positives = 20/23 (86%)
 Frame = -3

Query: 660 GEITSVKMPLVKGCGVVQFANRN 592
           GEI SVK+P+ KGCG VQFANRN
Sbjct: 312 GEIVSVKIPVGKGCGFVQFANRN 334


>ref|XP_002284337.2| PREDICTED: uncharacterized RNA-binding protein C23E6.01c-like
           isoform 1 [Vitis vinifera]
          Length = 409

 Score = 60.8 bits (146), Expect(2) = 1e-13
 Identities = 27/37 (72%), Positives = 32/37 (86%)
 Frame = -2

Query: 598 QKHAEEARGKLNGTTVGKQTVSLSWGRNPSNKQMRAD 488
           + +AE+A  KLNGT +GKQTV LSWGRNP+NKQMRAD
Sbjct: 324 RNNAEDALQKLNGTVIGKQTVRLSWGRNPANKQMRAD 360



 Score = 41.2 bits (95), Expect(2) = 1e-13
 Identities = 18/23 (78%), Positives = 20/23 (86%)
 Frame = -3

Query: 660 GEITSVKMPLVKGCGVVQFANRN 592
           GEI SVK+P+ KGCG VQFANRN
Sbjct: 303 GEIVSVKIPVGKGCGFVQFANRN 325


>emb|CBI19566.3| unnamed protein product [Vitis vinifera]
          Length = 324

 Score = 60.8 bits (146), Expect(2) = 1e-13
 Identities = 27/37 (72%), Positives = 32/37 (86%)
 Frame = -2

Query: 598 QKHAEEARGKLNGTTVGKQTVSLSWGRNPSNKQMRAD 488
           + +AE+A  KLNGT +GKQTV LSWGRNP+NKQMRAD
Sbjct: 239 RNNAEDALQKLNGTVIGKQTVRLSWGRNPANKQMRAD 275



 Score = 41.2 bits (95), Expect(2) = 1e-13
 Identities = 18/23 (78%), Positives = 20/23 (86%)
 Frame = -3

Query: 660 GEITSVKMPLVKGCGVVQFANRN 592
           GEI SVK+P+ KGCG VQFANRN
Sbjct: 218 GEIVSVKIPVGKGCGFVQFANRN 240


>ref|XP_003549410.1| PREDICTED: RNA-binding post-transcriptional regulator csx1-like
           [Glycine max]
          Length = 401

 Score = 60.1 bits (144), Expect(2) = 2e-13
 Identities = 27/37 (72%), Positives = 31/37 (83%)
 Frame = -2

Query: 598 QKHAEEARGKLNGTTVGKQTVSLSWGRNPSNKQMRAD 488
           + +AEEA  KLNGTT+GKQTV LSWGRNP+NKQ R D
Sbjct: 316 RNNAEEALQKLNGTTIGKQTVRLSWGRNPANKQFRMD 352



 Score = 41.2 bits (95), Expect(2) = 2e-13
 Identities = 18/23 (78%), Positives = 20/23 (86%)
 Frame = -3

Query: 660 GEITSVKMPLVKGCGVVQFANRN 592
           GEI SVK+P+ KGCG VQFANRN
Sbjct: 295 GEIVSVKIPVGKGCGFVQFANRN 317


>ref|XP_003603009.1| RNA-binding protein [Medicago truncatula]
           gi|355492057|gb|AES73260.1| RNA-binding protein
           [Medicago truncatula]
          Length = 420

 Score = 59.7 bits (143), Expect(2) = 2e-13
 Identities = 27/37 (72%), Positives = 32/37 (86%)
 Frame = -2

Query: 598 QKHAEEARGKLNGTTVGKQTVSLSWGRNPSNKQMRAD 488
           + +AEEA  KLNGTTVGKQTV LSWGRNP+NKQ R++
Sbjct: 337 RNNAEEALQKLNGTTVGKQTVRLSWGRNPANKQFRSE 373



 Score = 41.2 bits (95), Expect(2) = 2e-13
 Identities = 18/23 (78%), Positives = 20/23 (86%)
 Frame = -3

Query: 660 GEITSVKMPLVKGCGVVQFANRN 592
           GEI SVK+P+ KGCG VQFANRN
Sbjct: 316 GEIVSVKIPVGKGCGFVQFANRN 338


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