BLASTX nr result

ID: Papaver22_contig00025082 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Papaver22_contig00025082
         (421 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002270164.2| PREDICTED: ribosome biogenesis protein BMS1 ...   108   4e-22
emb|CBI17233.3| unnamed protein product [Vitis vinifera]              108   4e-22
ref|XP_002328026.1| predicted protein [Populus trichocarpa] gi|2...   107   1e-21
ref|XP_003540688.1| PREDICTED: ribosome biogenesis protein BMS1 ...   106   2e-21
ref|XP_003606827.1| Ribosome biogenesis protein BMS1-like protei...   106   2e-21

>ref|XP_002270164.2| PREDICTED: ribosome biogenesis protein BMS1 homolog [Vitis vinifera]
          Length = 1139

 Score =  108 bits (270), Expect = 4e-22
 Identities = 48/87 (55%), Positives = 67/87 (77%), Gaps = 2/87 (2%)
 Frame = +3

Query: 96   KNLQY-QARLEQHSWQMSSLKTKDPIIVSVGWRRYETIPIY-TQDCGGWHKMLEYTPAAE 269
            +N+ Y Q R+++H W    LKT+DPIIVS+GWRRY+TIP+Y T+DC G H+ML+YT    
Sbjct: 773  ENVGYMQVRIKRHRWHKKLLKTRDPIIVSIGWRRYQTIPVYATEDCNGRHRMLKYTKEHM 832

Query: 270  FCMATFWGPLVPSGSGVVAVRSLADNK 350
             C+A FWGPL P  +GVVAV++L++N+
Sbjct: 833  HCLAMFWGPLAPPNTGVVAVQNLSNNQ 859


>emb|CBI17233.3| unnamed protein product [Vitis vinifera]
          Length = 1305

 Score =  108 bits (270), Expect = 4e-22
 Identities = 48/87 (55%), Positives = 67/87 (77%), Gaps = 2/87 (2%)
 Frame = +3

Query: 96   KNLQY-QARLEQHSWQMSSLKTKDPIIVSVGWRRYETIPIY-TQDCGGWHKMLEYTPAAE 269
            +N+ Y Q R+++H W    LKT+DPIIVS+GWRRY+TIP+Y T+DC G H+ML+YT    
Sbjct: 939  ENVGYMQVRIKRHRWHKKLLKTRDPIIVSIGWRRYQTIPVYATEDCNGRHRMLKYTKEHM 998

Query: 270  FCMATFWGPLVPSGSGVVAVRSLADNK 350
             C+A FWGPL P  +GVVAV++L++N+
Sbjct: 999  HCLAMFWGPLAPPNTGVVAVQNLSNNQ 1025


>ref|XP_002328026.1| predicted protein [Populus trichocarpa] gi|222837435|gb|EEE75814.1|
            predicted protein [Populus trichocarpa]
          Length = 1181

 Score =  107 bits (267), Expect = 1e-21
 Identities = 47/81 (58%), Positives = 62/81 (76%), Gaps = 1/81 (1%)
 Frame = +3

Query: 111  QARLEQHSWQMSSLKTKDPIIVSVGWRRYETIPIYT-QDCGGWHKMLEYTPAAEFCMATF 287
            QARL++H W    LKTKDP+I S+GWRRY+T P+Y  +D  G H+ML+YTP    C+ATF
Sbjct: 820  QARLKRHRWHRKVLKTKDPVIFSIGWRRYQTTPVYAIEDRNGRHRMLKYTPEHMHCLATF 879

Query: 288  WGPLVPSGSGVVAVRSLADNK 350
            WGPL P  +GVVAV++LA+N+
Sbjct: 880  WGPLAPPNTGVVAVQNLANNQ 900


>ref|XP_003540688.1| PREDICTED: ribosome biogenesis protein BMS1 homolog [Glycine max]
          Length = 1181

 Score =  106 bits (265), Expect = 2e-21
 Identities = 49/87 (56%), Positives = 66/87 (75%), Gaps = 2/87 (2%)
 Frame = +3

Query: 96   KNLQY-QARLEQHSWQMSSLKTKDPIIVSVGWRRYETIPIYT-QDCGGWHKMLEYTPAAE 269
            +N+ Y QARL++H W    LKT+DPIIVSVGWRRY+T PIY  +D  G H+ML+YTP   
Sbjct: 812  ENVGYMQARLKRHRWHKKVLKTRDPIIVSVGWRRYQTTPIYAIEDSNGRHRMLKYTPEHM 871

Query: 270  FCMATFWGPLVPSGSGVVAVRSLADNK 350
             C+A FWGPL P  +GVVA+++L++N+
Sbjct: 872  HCLAMFWGPLAPPNTGVVAIQNLSNNQ 898


>ref|XP_003606827.1| Ribosome biogenesis protein BMS1-like protein [Medicago truncatula]
            gi|355507882|gb|AES89024.1| Ribosome biogenesis protein
            BMS1-like protein [Medicago truncatula]
          Length = 988

 Score =  106 bits (264), Expect = 2e-21
 Identities = 48/87 (55%), Positives = 66/87 (75%), Gaps = 2/87 (2%)
 Frame = +3

Query: 96   KNLQY-QARLEQHSWQMSSLKTKDPIIVSVGWRRYETIPIYT-QDCGGWHKMLEYTPAAE 269
            +N+ Y QARL++H W    LKT+DPIIVSVGWRRY+T P+Y  +D  G H+ML+YTP   
Sbjct: 808  ENVGYMQARLKRHRWHKKVLKTRDPIIVSVGWRRYQTTPVYAIEDLNGRHRMLKYTPEHM 867

Query: 270  FCMATFWGPLVPSGSGVVAVRSLADNK 350
             C+A FWGPL P  +G+VAV++L++N+
Sbjct: 868  HCLAMFWGPLAPPNTGIVAVQTLSNNQ 894


Top