BLASTX nr result

ID: Papaver22_contig00024498 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Papaver22_contig00024498
         (493 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002279343.1| PREDICTED: pentatricopeptide repeat-containi...   199   2e-49
emb|CAN65480.1| hypothetical protein VITISV_030746 [Vitis vinifera]   199   2e-49
ref|XP_002311462.1| predicted protein [Populus trichocarpa] gi|2...   196   1e-48
ref|XP_002533966.1| pentatricopeptide repeat-containing protein,...   193   1e-47
ref|XP_004172707.1| PREDICTED: pentatricopeptide repeat-containi...   186   2e-45

>ref|XP_002279343.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g08070-like [Vitis vinifera]
          Length = 623

 Score =  199 bits (506), Expect = 2e-49
 Identities = 94/164 (57%), Positives = 120/164 (73%)
 Frame = -2

Query: 492 LVESKKVHCFVIKTGFQDNPFISISMIDLYSTLGQVKSARIMFDVMPERNIVAWTTMISG 313
           L+E ++VHCF+IK GF+ NPF+  ++ID+YS  G V  A  +F  M ERN+VAWT+MI+G
Sbjct: 152 LIEGEQVHCFLIKCGFRGNPFVGTTLIDMYSAGGTVGDAYKIFCEMFERNVVAWTSMING 211

Query: 312 YILSGDIENARALFDVTPDRDVIIWNTMVSGYIGKGDMYTAKKLFDEMPNPDIMAFNTIL 133
           YILS D+ +AR LFD+ P+RDV++WN MVSGYI  GDM  A+KLF EMPN D+M +NT+L
Sbjct: 212 YILSADLVSARRLFDLAPERDVVLWNIMVSGYIEGGDMVEARKLFHEMPNRDVMFWNTVL 271

Query: 132 IGYFNNDEFEKGERFFNEMPEKNVFSWNGLIGGYARKSQFSKVL 1
            GY  N   E  E  F EMPE+N+FSWN LIGGYA    F +VL
Sbjct: 272 KGYATNGNVEALEGLFEEMPERNIFSWNALIGGYAHNGLFFEVL 315



 Score = 66.2 bits (160), Expect = 3e-09
 Identities = 43/179 (24%), Positives = 72/179 (40%), Gaps = 40/179 (22%)
 Frame = -2

Query: 417 MIDLYSTLGQVKSARIMFDVMPERNIVAWTTMISGYILSGDIENARALFDVTPDRDVIIW 238
           M+  Y   G +  AR +F  MP R+++ W T++ GY  +G++E    LF+  P+R++  W
Sbjct: 239 MVSGYIEGGDMVEARKLFHEMPNRDVMFWNTVLKGYATNGNVEALEGLFEEMPERNIFSW 298

Query: 237 NTMVSGYIGKGDMY----TAKKLFDEMPNP------------------------------ 160
           N ++ GY   G  +    + K++  E   P                              
Sbjct: 299 NALIGGYAHNGLFFEVLGSFKRMLSESDVPPNDATLVTVLSACARLGALDLGKWVHVYAE 358

Query: 159 ------DIMAFNTILIGYFNNDEFEKGERFFNEMPEKNVFSWNGLIGGYARKSQFSKVL 1
                 ++   N ++  Y      E     F  M  K++ SWN LIGG A  S+ +  L
Sbjct: 359 SSGLKGNVYVGNALMDMYAKCGIIENAISVFRGMDTKDLISWNTLIGGLAMHSRGADAL 417


>emb|CAN65480.1| hypothetical protein VITISV_030746 [Vitis vinifera]
          Length = 686

 Score =  199 bits (506), Expect = 2e-49
 Identities = 94/164 (57%), Positives = 120/164 (73%)
 Frame = -2

Query: 492 LVESKKVHCFVIKTGFQDNPFISISMIDLYSTLGQVKSARIMFDVMPERNIVAWTTMISG 313
           L+E ++VHCF+IK GF+ NPF+  ++ID+YS  G V  A  +F  M ERN+VAWT+MI+G
Sbjct: 215 LIEGEQVHCFLIKCGFRGNPFVGTTLIDMYSAGGTVGDAYKIFCEMFERNVVAWTSMING 274

Query: 312 YILSGDIENARALFDVTPDRDVIIWNTMVSGYIGKGDMYTAKKLFDEMPNPDIMAFNTIL 133
           YILS D+ +AR LFD+ P+RDV++WN MVSGYI  GDM  A+KLF EMPN D+M +NT+L
Sbjct: 275 YILSADLVSARRLFDLAPERDVVLWNIMVSGYIEGGDMVEARKLFXEMPNRDVMFWNTVL 334

Query: 132 IGYFNNDEFEKGERFFNEMPEKNVFSWNGLIGGYARKSQFSKVL 1
            GY  N   E  E  F EMPE+N+FSWN LIGGYA    F +VL
Sbjct: 335 KGYATNGNVEALEGLFEEMPERNIFSWNALIGGYAHNGLFFEVL 378



 Score = 66.2 bits (160), Expect = 3e-09
 Identities = 43/179 (24%), Positives = 72/179 (40%), Gaps = 40/179 (22%)
 Frame = -2

Query: 417 MIDLYSTLGQVKSARIMFDVMPERNIVAWTTMISGYILSGDIENARALFDVTPDRDVIIW 238
           M+  Y   G +  AR +F  MP R+++ W T++ GY  +G++E    LF+  P+R++  W
Sbjct: 302 MVSGYIEGGDMVEARKLFXEMPNRDVMFWNTVLKGYATNGNVEALEGLFEEMPERNIFSW 361

Query: 237 NTMVSGYIGKGDMY----TAKKLFDEMPNP------------------------------ 160
           N ++ GY   G  +    + K++  E   P                              
Sbjct: 362 NALIGGYAHNGLFFEVLGSFKRMLSESDVPPNDATLVTVLSACARLGALDLGKWVHVYAE 421

Query: 159 ------DIMAFNTILIGYFNNDEFEKGERFFNEMPEKNVFSWNGLIGGYARKSQFSKVL 1
                 ++   N ++  Y      E     F  M  K++ SWN LIGG A  S+ +  L
Sbjct: 422 SSGLKGNVYVGNALMDMYAKCGIIENAISVFRGMDTKDLISWNTLIGGLAMHSRGADAL 480


>ref|XP_002311462.1| predicted protein [Populus trichocarpa] gi|222851282|gb|EEE88829.1|
           predicted protein [Populus trichocarpa]
          Length = 538

 Score =  196 bits (499), Expect = 1e-48
 Identities = 88/164 (53%), Positives = 124/164 (75%)
 Frame = -2

Query: 492 LVESKKVHCFVIKTGFQDNPFISISMIDLYSTLGQVKSARIMFDVMPERNIVAWTTMISG 313
           L E ++VHCFVIK+GF+ NPF++ ++ID+Y++ G + +A  +F  M ERN++AWT MI+G
Sbjct: 67  LKEGEEVHCFVIKSGFRANPFVATTLIDMYASGGAIHAAYRVFGEMIERNVIAWTAMING 126

Query: 312 YILSGDIENARALFDVTPDRDVIIWNTMVSGYIGKGDMYTAKKLFDEMPNPDIMAFNTIL 133
           YI   D+  AR LFD+ P+RD+++WNTM+SGYI   D+  A++LFD+MPN D+M++NT+L
Sbjct: 127 YITCCDLVTARRLFDLAPERDIVLWNTMISGYIEAKDVIRARELFDKMPNKDVMSWNTVL 186

Query: 132 IGYFNNDEFEKGERFFNEMPEKNVFSWNGLIGGYARKSQFSKVL 1
            GY +N +    ER F EMPE+NVFSWN LIGGY R   FS+VL
Sbjct: 187 NGYASNGDVMACERLFEEMPERNVFSWNALIGGYTRNGCFSEVL 230


>ref|XP_002533966.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis] gi|223526049|gb|EEF28413.1| pentatricopeptide
           repeat-containing protein, putative [Ricinus communis]
          Length = 515

 Score =  193 bits (490), Expect = 1e-47
 Identities = 90/162 (55%), Positives = 119/162 (73%)
 Frame = -2

Query: 486 ESKKVHCFVIKTGFQDNPFISISMIDLYSTLGQVKSARIMFDVMPERNIVAWTTMISGYI 307
           E +++HCFVIK+G + NPF+   +IDLYS+   + SA  +F  M ERN+VAWT+MI G+I
Sbjct: 182 EGEELHCFVIKSGCRANPFVGTMLIDLYSSGRMIVSAYRVFGEMIERNVVAWTSMIKGFI 241

Query: 306 LSGDIENARALFDVTPDRDVIIWNTMVSGYIGKGDMYTAKKLFDEMPNPDIMAFNTILIG 127
           L  DIE AR LF++ P RDV++WN M+SGYI  GD+  A++LF +MPN D+M++NT+L G
Sbjct: 242 LCNDIETARRLFELAPQRDVVLWNIMISGYIDIGDLVRAQELFHKMPNKDVMSWNTLLNG 301

Query: 126 YFNNDEFEKGERFFNEMPEKNVFSWNGLIGGYARKSQFSKVL 1
           Y N  + E  ER F EMPE+NVFSWNGLIGGYA    F +VL
Sbjct: 302 YANGGDIEACERLFEEMPERNVFSWNGLIGGYAHHGCFLEVL 343



 Score = 66.2 bits (160), Expect = 3e-09
 Identities = 43/170 (25%), Positives = 68/170 (40%), Gaps = 40/170 (23%)
 Frame = -2

Query: 417 MIDLYSTLGQVKSARIMFDVMPERNIVAWTTMISGYILSGDIENARALFDVTPDRDVIIW 238
           MI  Y  +G +  A+ +F  MP +++++W T+++GY   GDIE    LF+  P+R+V  W
Sbjct: 267 MISGYIDIGDLVRAQELFHKMPNKDVMSWNTLLNGYANGGDIEACERLFEEMPERNVFSW 326

Query: 237 NTMVSGYIGKGDMYTAKKLFDEM-------PNP--------------------------- 160
           N ++ GY   G        F  M       PN                            
Sbjct: 327 NGLIGGYAHHGCFLEVLSSFKRMLVDGIVVPNDATLVTVLSACARLGALDLGKWVHMYAQ 386

Query: 159 ------DIMAFNTILIGYFNNDEFEKGERFFNEMPEKNVFSWNGLIGGYA 28
                 ++   N ++  Y      E     F  + +K++ SWN LIGG A
Sbjct: 387 SNGYKGNVYIGNALIDMYAKCGNVENAIVVFKSLDKKDLISWNTLIGGLA 436


>ref|XP_004172707.1| PREDICTED: pentatricopeptide repeat-containing protein
           At3g29230-like, partial [Cucumis sativus]
          Length = 610

 Score =  186 bits (472), Expect = 2e-45
 Identities = 92/163 (56%), Positives = 117/163 (71%)
 Frame = -2

Query: 489 VESKKVHCFVIKTGFQDNPFISISMIDLYSTLGQVKSARIMFDVMPERNIVAWTTMISGY 310
           VE +++HC VIK G + N F++ ++ID+YS    + SA  +F  M ERNIVAWT+MISGY
Sbjct: 140 VEGEEIHCEVIKGGLEGNQFVATTLIDVYSGGRAIGSAYKLFVGMLERNIVAWTSMISGY 199

Query: 309 ILSGDIENARALFDVTPDRDVIIWNTMVSGYIGKGDMYTAKKLFDEMPNPDIMAFNTILI 130
           IL   +  AR LFD+ P+RDV++WN MVSGYI  GDM  A+KLFD MP  D M++NT+L 
Sbjct: 200 ILCNRVALARRLFDLAPERDVVLWNIMVSGYIEIGDMKAARKLFDTMPYRDTMSWNTMLN 259

Query: 129 GYFNNDEFEKGERFFNEMPEKNVFSWNGLIGGYARKSQFSKVL 1
           GY NN + E  E+ F EMPE+NVFSWNGLIGGYA    F +VL
Sbjct: 260 GYANNGDVEACEQLFEEMPERNVFSWNGLIGGYAHNGCFFEVL 302


Top