BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Papaver22_contig00024473
         (757 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

pir||T00833 RNA-directed DNA polymerase homolog T13L16.7 - Arabi...    74   3e-11
gb|AAF17675.1|AC009243_2 F28K19.3 [Arabidopsis thaliana]               72   1e-10
pir||S65812 RNA-directed DNA polymerase (EC 2.7.7.49) (clone DW1...    69   1e-09
gb|AAD21778.1| putative non-LTR retroelement reverse transcripta...    68   2e-09
gb|AAB82639.1| putative non-LTR retroelement reverse transcripta...    64   3e-08

>pir||T00833 RNA-directed DNA polymerase homolog T13L16.7 - Arabidopsis thaliana
           (fragment)
          Length = 1365

 Score = 74.3 bits (181), Expect = 3e-11
 Identities = 36/70 (51%), Positives = 43/70 (61%)
 Frame = +2

Query: 548 IFWNCQGLGSDTTQSYMKDMVDNHDPDILFLSETKNKDGMVRKIITVLGYKNSFIVDPVG 727
           I WNCQGL +  T  Y+K+M  +H PDILFL ETKN    V K+   LGY     V+P G
Sbjct: 3   ISWNCQGLRNPWTIRYLKEMKKDHFPDILFLMETKNSQDFVYKVFCWLGYDFIHTVEPEG 62

Query: 728 LSGGLVVAWK 757
            SGGL + WK
Sbjct: 63  RSGGLAIFWK 72


>gb|AAF17675.1|AC009243_2 F28K19.3 [Arabidopsis thaliana]
          Length = 238

 Score = 72.0 bits (175), Expect = 1e-10
 Identities = 36/83 (43%), Positives = 51/83 (61%)
 Frame = +2

Query: 509 KNHYMHYTGNLRAIFWNCQGLGSDTTQSYMKDMVDNHDPDILFLSETKNKDGMVRKIITV 688
           + H++H      A+ WNCQGLG D T   +K++   + PD++ LSETK ++  VR     
Sbjct: 48  QEHFIHGI----ALCWNCQGLGIDLTVRRLKEINRKYLPDVICLSETKQRNDYVRDTCCE 103

Query: 689 LGYKNSFIVDPVGLSGGLVVAWK 757
           LG+ N  +V  +GLSGGLVV WK
Sbjct: 104 LGFSNFVMVPSMGLSGGLVVLWK 126


>pir||S65812 RNA-directed DNA polymerase (EC 2.7.7.49) (clone DW15) -
           Arabidopsis thaliana retrotransposon Ta11-1
           gi|976278|gb|AAA75254.1| reverse transcriptase
           [Arabidopsis thaliana]
          Length = 1333

 Score = 68.6 bits (166), Expect = 1e-09
 Identities = 34/72 (47%), Positives = 46/72 (63%), Gaps = 2/72 (2%)
 Frame = +2

Query: 548 IFWNCQGLG--SDTTQSYMKDMVDNHDPDILFLSETKNKDGMVRKIITVLGYKNSFIVDP 721
           + WNCQGLG   D T   + +M  +H P++LFL ETKN   +V  +   LGY+  F V+P
Sbjct: 4   VSWNCQGLGWSQDLTIPRLMEMRLSHFPEVLFLMETKNCSNVVVDLQEWLGYERVFTVNP 63

Query: 722 VGLSGGLVVAWK 757
           +GLSGGL + WK
Sbjct: 64  IGLSGGLALFWK 75


>gb|AAD21778.1| putative non-LTR retroelement reverse transcriptase [Arabidopsis
           thaliana]
          Length = 1715

 Score = 68.2 bits (165), Expect = 2e-09
 Identities = 33/76 (43%), Positives = 47/76 (61%)
 Frame = +2

Query: 530 TGNLRAIFWNCQGLGSDTTQSYMKDMVDNHDPDILFLSETKNKDGMVRKIITVLGYKNSF 709
           T  +R  FWNCQGLG   T   ++++   +  D+LFL ETK +D   R +   +G+++  
Sbjct: 360 TSPMRVGFWNCQGLGQPLTVRRLEEVQRVYFLDMLFLIETKQQDNYTRDLGVKMGFEDMC 419

Query: 710 IVDPVGLSGGLVVAWK 757
           I+ P GLSGGLVV WK
Sbjct: 420 IISPRGLSGGLVVYWK 435


>gb|AAB82639.1| putative non-LTR retroelement reverse transcriptase [Arabidopsis
           thaliana]
          Length = 1374

 Score = 63.9 bits (154), Expect = 3e-08
 Identities = 25/73 (34%), Positives = 47/73 (64%)
 Frame = +2

Query: 539 LRAIFWNCQGLGSDTTQSYMKDMVDNHDPDILFLSETKNKDGMVRKIITVLGYKNSFIVD 718
           +R + WNCQG+G+  T  +++++   + P+++FL ETK +   +  ++  LG+ +   V+
Sbjct: 1   MRILSWNCQGVGNTPTVRHLREIRGLYFPEVIFLCETKKRRNYLENVVGHLGFFDLHTVE 60

Query: 719 PVGLSGGLVVAWK 757
           P+G SGGL + WK
Sbjct: 61  PIGKSGGLALMWK 73