BLASTX nr result

ID: Papaver22_contig00024464 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Papaver22_contig00024464
         (567 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|ABA41232.1| beta-tubulin [Mesostigma viride]                        62   6e-08
gb|ABR22554.1| beta-tubulin [Diacronema sp. CCMP610]                   59   5e-07
gb|AAW58082.1| beta-tubulin, partial [Pavlova lutheri]                 57   2e-06
gb|ACR46913.1| beta-tubulin [Pavlova gyrans]                           57   2e-06

>gb|ABA41232.1| beta-tubulin [Mesostigma viride]
          Length = 398

 Score = 62.0 bits (149), Expect = 6e-08
 Identities = 40/104 (38%), Positives = 51/104 (49%), Gaps = 2/104 (1%)
 Frame = -3

Query: 307 TLVEPFNATLSVHQPVEDVEECVVLIMKXXXXXXXXXXXXXXXXXXXXXXXLQQDL--VL 134
           T+VEP+NATLSVHQ VE+ +EC+VL  +                       +   +  V 
Sbjct: 165 TVVEPYNATLSVHQLVENADECMVLDNEALYDICFRTLKLTTPTFGDLNHLISATMSGVT 224

Query: 133 MLFEVSLTIEL*LEKACC*LDPIPGIHLFMVGFAPVTSRGSQQY 2
                   +   L K    L P P +H FMVGFAP+TSRGSQQY
Sbjct: 225 CCLRFPGQLNSDLLKLAVNLIPFPRLHFFMVGFAPLTSRGSQQY 268


>gb|ABR22554.1| beta-tubulin [Diacronema sp. CCMP610]
          Length = 314

 Score = 58.9 bits (141), Expect = 5e-07
 Identities = 38/106 (35%), Positives = 52/106 (49%), Gaps = 4/106 (3%)
 Frame = -3

Query: 307 TLVEPFNATLSVHQPVEDVEECVVL----IMKXXXXXXXXXXXXXXXXXXXXXXXLQQDL 140
           T+VEP+NATLSVHQ VE+ +EC++L    +                         +    
Sbjct: 83  TVVEPYNATLSVHQLVENSDECLLLDNEALYDICFRTLKLTTPTFGGLNHLVAAVMSSTT 142

Query: 139 VLMLFEVSLTIEL*LEKACC*LDPIPGIHLFMVGFAPVTSRGSQQY 2
             + F   L  +L   K    L P P +H FM+GF+P+TSRGSQQY
Sbjct: 143 CCLRFPGQLNSDL--RKMGVNLVPFPRLHFFMIGFSPLTSRGSQQY 186


>gb|AAW58082.1| beta-tubulin, partial [Pavlova lutheri]
          Length = 406

 Score = 57.0 bits (136), Expect = 2e-06
 Identities = 38/106 (35%), Positives = 51/106 (48%), Gaps = 4/106 (3%)
 Frame = -3

Query: 307 TLVEPFNATLSVHQPVEDVEECVVL----IMKXXXXXXXXXXXXXXXXXXXXXXXLQQDL 140
           T+VEP+NATLSVHQ VE+ +EC +L    +                         +    
Sbjct: 171 TVVEPYNATLSVHQLVENSDECFLLDNEALYDICFRTLKLTTPTFGDLNHLVAAVMSGAT 230

Query: 139 VLMLFEVSLTIEL*LEKACC*LDPIPGIHLFMVGFAPVTSRGSQQY 2
             + F   L  +L   K    L P P +H FM+GF+P+TSRGSQQY
Sbjct: 231 CCLRFPGQLNSDL--RKMGVNLVPFPRLHFFMIGFSPLTSRGSQQY 274


>gb|ACR46913.1| beta-tubulin [Pavlova gyrans]
          Length = 313

 Score = 57.0 bits (136), Expect = 2e-06
 Identities = 38/106 (35%), Positives = 51/106 (48%), Gaps = 4/106 (3%)
 Frame = -3

Query: 307 TLVEPFNATLSVHQPVEDVEECVVL----IMKXXXXXXXXXXXXXXXXXXXXXXXLQQDL 140
           T+VEP+NATLSVHQ VE+ +EC +L    +                         +    
Sbjct: 83  TVVEPYNATLSVHQLVENSDECFLLDNEALYDICFRTLKLTTPTFGDLNHLVAAVMSGAT 142

Query: 139 VLMLFEVSLTIEL*LEKACC*LDPIPGIHLFMVGFAPVTSRGSQQY 2
             + F   L  +L   K    L P P +H FM+GF+P+TSRGSQQY
Sbjct: 143 CCLRFPGQLNSDL--RKMGVNLVPFPRLHFFMIGFSPLTSRGSQQY 186


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