BLASTX nr result

ID: Papaver22_contig00024389 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Papaver22_contig00024389
         (538 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_004147097.1| PREDICTED: lipoyl synthase, chloroplastic-li...   153   1e-35
ref|XP_002319912.1| predicted protein [Populus trichocarpa] gi|3...   149   3e-34
ref|XP_003555873.1| PREDICTED: lipoyl synthase, chloroplastic-li...   147   8e-34
ref|XP_002873359.1| hypothetical protein ARALYDRAFT_325438 [Arab...   144   8e-33
emb|CAC08341.1| lipoic acid synthase-like protein [Arabidopsis t...   144   8e-33

>ref|XP_004147097.1| PREDICTED: lipoyl synthase, chloroplastic-like [Cucumis sativus]
           gi|449526690|ref|XP_004170346.1| PREDICTED: lipoyl
           synthase, chloroplastic-like [Cucumis sativus]
          Length = 398

 Score =  153 bits (387), Expect = 1e-35
 Identities = 75/115 (65%), Positives = 89/115 (77%), Gaps = 2/115 (1%)
 Frame = -2

Query: 339 IIRSEAINSSPSTNKTELKTVSQSNNSELFESK--NKNGGSYPGGMGAHTGRDPNVKKPE 166
           +IR EA+ SS S    +  + S S  S + ES+  +   G YPGGMG +TGRDP+VKKP 
Sbjct: 44  VIRCEALGSSSSEVAVQSSS-SSSGGSRVVESQEGSSKAGPYPGGMGPYTGRDPSVKKPG 102

Query: 165 WLRQKTPQGERFQQVKDYLSRLKLNTVCEEAQCPNIGECWNGGGDGISTATIMVL 1
           WLRQ+ PQGE+FQ+VKD LSRL LNTVCEEAQCPNIGECWNGGGDGI+TATIM+L
Sbjct: 103 WLRQRAPQGEKFQEVKDSLSRLNLNTVCEEAQCPNIGECWNGGGDGIATATIMLL 157


>ref|XP_002319912.1| predicted protein [Populus trichocarpa]
           gi|308191445|sp|B9I666.1|LISC1_POPTR RecName:
           Full=Lipoyl synthase 1, chloroplastic; AltName:
           Full=Lipoate synthase 1; Short=LS 1; Short=Lip-syn 1;
           AltName: Full=Lipoate synthase, plastidial 1;
           Short=LIP1p 1; AltName: Full=Lipoic acid synthase 1;
           Flags: Precursor gi|222858288|gb|EEE95835.1| predicted
           protein [Populus trichocarpa]
          Length = 376

 Score =  149 bits (376), Expect = 3e-34
 Identities = 80/126 (63%), Positives = 95/126 (75%)
 Frame = -2

Query: 378 PKPKPSNSISWNKIIRSEAINSSPSTNKTELKTVSQSNNSELFESKNKNGGSYPGGMGAH 199
           PK K S   S++KI R E+++  PS++K + K    S       S N NGG   G MG++
Sbjct: 21  PKSKSSFLCSYSKI-RCESVDY-PSSSKIDAKHPQIS-------SINSNGG---GKMGSY 68

Query: 198 TGRDPNVKKPEWLRQKTPQGERFQQVKDYLSRLKLNTVCEEAQCPNIGECWNGGGDGIST 19
           TGRDPNVKKPEWLRQK PQGER+ +VK+ LSRLKLNTVC+EAQCPNIGECWNGGGDGI+T
Sbjct: 69  TGRDPNVKKPEWLRQKAPQGERYDEVKESLSRLKLNTVCQEAQCPNIGECWNGGGDGIAT 128

Query: 18  ATIMVL 1
           ATIMVL
Sbjct: 129 ATIMVL 134


>ref|XP_003555873.1| PREDICTED: lipoyl synthase, chloroplastic-like [Glycine max]
          Length = 364

 Score =  147 bits (372), Expect = 8e-34
 Identities = 64/76 (84%), Positives = 70/76 (92%)
 Frame = -2

Query: 228 GSYPGGMGAHTGRDPNVKKPEWLRQKTPQGERFQQVKDYLSRLKLNTVCEEAQCPNIGEC 49
           G YPGG+G HTGRDPN KKPEWLRQK PQGERFQ++K+ LS LKLNTVCEEAQCPNIGEC
Sbjct: 46  GPYPGGLGPHTGRDPNAKKPEWLRQKAPQGERFQEIKESLSHLKLNTVCEEAQCPNIGEC 105

Query: 48  WNGGGDGISTATIMVL 1
           WNGGGDGI+TATIM+L
Sbjct: 106 WNGGGDGIATATIMLL 121


>ref|XP_002873359.1| hypothetical protein ARALYDRAFT_325438 [Arabidopsis lyrata subsp.
           lyrata] gi|297319196|gb|EFH49618.1| hypothetical protein
           ARALYDRAFT_325438 [Arabidopsis lyrata subsp. lyrata]
          Length = 477

 Score =  144 bits (363), Expect = 8e-33
 Identities = 69/95 (72%), Positives = 74/95 (77%), Gaps = 3/95 (3%)
 Frame = -2

Query: 276 SQSNNSELFESKNKNGGSYPGGM---GAHTGRDPNVKKPEWLRQKTPQGERFQQVKDYLS 106
           S S    L E + K    YPGGM   G  TGRDPNVKKP WLRQK PQGERFQ+VK+ LS
Sbjct: 4   SSSLKKNLMELEGKKSEPYPGGMPKMGPFTGRDPNVKKPAWLRQKAPQGERFQEVKESLS 63

Query: 105 RLKLNTVCEEAQCPNIGECWNGGGDGISTATIMVL 1
           RL LNTVCEEAQCPNIGECWNGGGDG++TATIMVL
Sbjct: 64  RLNLNTVCEEAQCPNIGECWNGGGDGVATATIMVL 98


>emb|CAC08341.1| lipoic acid synthase-like protein [Arabidopsis thaliana]
          Length = 477

 Score =  144 bits (363), Expect = 8e-33
 Identities = 69/95 (72%), Positives = 74/95 (77%), Gaps = 3/95 (3%)
 Frame = -2

Query: 276 SQSNNSELFESKNKNGGSYPGGM---GAHTGRDPNVKKPEWLRQKTPQGERFQQVKDYLS 106
           S S    L E + K    YPGGM   G  TGRDPNVKKP WLRQK PQGERFQ+VK+ LS
Sbjct: 4   SSSLKKSLMELEGKKSEPYPGGMPKMGPFTGRDPNVKKPAWLRQKAPQGERFQEVKESLS 63

Query: 105 RLKLNTVCEEAQCPNIGECWNGGGDGISTATIMVL 1
           RL LNTVCEEAQCPNIGECWNGGGDG++TATIMVL
Sbjct: 64  RLNLNTVCEEAQCPNIGECWNGGGDGVATATIMVL 98


Top