BLASTX nr result

ID: Papaver22_contig00024379 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Papaver22_contig00024379
         (636 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002879891.1| RNA binding protein [Arabidopsis lyrata subs...    73   5e-11
ref|XP_004146450.1| PREDICTED: probable RNA-binding protein EIF1...    72   1e-10
ref|XP_003558986.1| PREDICTED: probable RNA-binding protein EIF1...    71   1e-10
ref|NP_181610.1| OB-fold nucleic acid binding domain-containing ...    71   2e-10
ref|NP_001118488.1| OB-fold nucleic acid binding domain-containi...    71   2e-10

>ref|XP_002879891.1| RNA binding protein [Arabidopsis lyrata subsp. lyrata]
           gi|297325730|gb|EFH56150.1| RNA binding protein
           [Arabidopsis lyrata subsp. lyrata]
          Length = 171

 Score = 72.8 bits (177), Expect = 5e-11
 Identities = 33/60 (55%), Positives = 44/60 (73%)
 Frame = -1

Query: 633 EQVRLLQKSPDWPETFKVTGAEESNAHPQVSNSQAAEELNSSEDEDGLPPLEANTNRIRP 454
           EQVRLLQKSP+WPE FK T    ++    +   +   E++SS+D+DG+PPLEANTNR+RP
Sbjct: 95  EQVRLLQKSPEWPEIFKDTKPIPADKSSPIEQHEDDGEIDSSDDDDGMPPLEANTNRLRP 154


>ref|XP_004146450.1| PREDICTED: probable RNA-binding protein EIF1AD-like [Cucumis
           sativus]
          Length = 169

 Score = 71.6 bits (174), Expect = 1e-10
 Identities = 33/61 (54%), Positives = 43/61 (70%)
 Frame = -1

Query: 633 EQVRLLQKSPDWPETFKVTGAEESNAHPQVSNSQAAEELNSSEDEDGLPPLEANTNRIRP 454
           EQ+R LQKSP+WPE FK     + N + Q  N+Q  E+  +S D+DGLPPLEANTNR +P
Sbjct: 95  EQIRELQKSPEWPEIFKNAIVGDRNENLQAQNNQPGEDEVNSSDDDGLPPLEANTNRAKP 154

Query: 453 V 451
           +
Sbjct: 155 L 155


>ref|XP_003558986.1| PREDICTED: probable RNA-binding protein EIF1AD-like [Brachypodium
           distachyon]
          Length = 164

 Score = 71.2 bits (173), Expect = 1e-10
 Identities = 37/62 (59%), Positives = 43/62 (69%)
 Frame = -1

Query: 636 HEQVRLLQKSPDWPETFKVTGAEESNAHPQVSNSQAAEELNSSEDEDGLPPLEANTNRIR 457
           H+QVR L+KS +WP  FK T    SNA    + S+  EELNS ED+D LPPLEANTNR R
Sbjct: 95  HDQVRALEKSGEWPAIFKST----SNAWATGTTSKVEEELNSEEDDDDLPPLEANTNRNR 150

Query: 456 PV 451
           PV
Sbjct: 151 PV 152


>ref|NP_181610.1| OB-fold nucleic acid binding domain-containing protein [Arabidopsis
           thaliana] gi|330254783|gb|AEC09877.1| OB-fold nucleic
           acid binding domain-containing protein [Arabidopsis
           thaliana]
          Length = 171

 Score = 70.9 bits (172), Expect = 2e-10
 Identities = 32/60 (53%), Positives = 43/60 (71%)
 Frame = -1

Query: 633 EQVRLLQKSPDWPETFKVTGAEESNAHPQVSNSQAAEELNSSEDEDGLPPLEANTNRIRP 454
           EQVRLLQKSP+WPE FK T    +     +   +   E++SS+D+DG+PPL+ANTNR+RP
Sbjct: 95  EQVRLLQKSPEWPEIFKDTRPIPAEKSSPIEQHEDDGEVDSSDDDDGMPPLQANTNRLRP 154


>ref|NP_001118488.1| OB-fold nucleic acid binding domain-containing protein [Arabidopsis
           thaliana] gi|330254784|gb|AEC09878.1| OB-fold nucleic
           acid binding domain-containing protein [Arabidopsis
           thaliana]
          Length = 132

 Score = 70.9 bits (172), Expect = 2e-10
 Identities = 32/60 (53%), Positives = 43/60 (71%)
 Frame = -1

Query: 633 EQVRLLQKSPDWPETFKVTGAEESNAHPQVSNSQAAEELNSSEDEDGLPPLEANTNRIRP 454
           EQVRLLQKSP+WPE FK T    +     +   +   E++SS+D+DG+PPL+ANTNR+RP
Sbjct: 56  EQVRLLQKSPEWPEIFKDTRPIPAEKSSPIEQHEDDGEVDSSDDDDGMPPLQANTNRLRP 115


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