BLASTX nr result

ID: Papaver22_contig00024349 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Papaver22_contig00024349
         (509 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI30112.3| unnamed protein product [Vitis vinifera]              109   2e-22
ref|XP_002273311.1| PREDICTED: ribosomal RNA small subunit methy...   109   2e-22
ref|XP_002275293.1| PREDICTED: ribosomal RNA small subunit methy...   109   2e-22
ref|XP_002322624.1| predicted protein [Populus trichocarpa] gi|2...   109   3e-22
ref|XP_002307982.1| predicted protein [Populus trichocarpa] gi|2...   109   3e-22

>emb|CBI30112.3| unnamed protein product [Vitis vinifera]
          Length = 319

 Score =  109 bits (273), Expect = 2e-22
 Identities = 53/63 (84%), Positives = 59/63 (93%)
 Frame = +3

Query: 3   YVKTEKGVLFEVKPHCRMPRTFKRFCGIMLQLLQKLSITATGKREKLLRVIANPVTRHLP 182
           YV+TEKGVLFEVKPH R+PRT+KRF GIMLQLLQKLSITA GKREKLLRVI NPVT++LP
Sbjct: 181 YVRTEKGVLFEVKPHVRIPRTYKRFSGIMLQLLQKLSITAVGKREKLLRVIKNPVTQYLP 240

Query: 183 LNS 191
           +NS
Sbjct: 241 VNS 243



 Score = 85.1 bits (209), Expect = 5e-15
 Identities = 39/55 (70%), Positives = 46/55 (83%)
 Frame = +1

Query: 319 AASDDMNLVFVVGAMSHGKINNDYTDDFISVSGYPLSAACCIGRICNALELKWKI 483
           A SDD++LVFVVGAM+HGKI+NDYTDDFI++SGYPLSA+ C   IC AL  KW I
Sbjct: 264 AVSDDVDLVFVVGAMAHGKISNDYTDDFIAISGYPLSASWCTYLICGALMQKWNI 318


>ref|XP_002273311.1| PREDICTED: ribosomal RNA small subunit methyltransferase nep-1
           [Vitis vinifera]
          Length = 271

 Score =  109 bits (273), Expect = 2e-22
 Identities = 53/63 (84%), Positives = 59/63 (93%)
 Frame = +3

Query: 3   YVKTEKGVLFEVKPHCRMPRTFKRFCGIMLQLLQKLSITATGKREKLLRVIANPVTRHLP 182
           YV+TEKGVLFEVKPH R+PRT+KRF GIMLQLLQKLSITA GKREKLLRVI NPVT++LP
Sbjct: 133 YVRTEKGVLFEVKPHVRIPRTYKRFSGIMLQLLQKLSITAVGKREKLLRVIKNPVTQYLP 192

Query: 183 LNS 191
           +NS
Sbjct: 193 VNS 195



 Score = 85.1 bits (209), Expect = 5e-15
 Identities = 39/55 (70%), Positives = 46/55 (83%)
 Frame = +1

Query: 319 AASDDMNLVFVVGAMSHGKINNDYTDDFISVSGYPLSAACCIGRICNALELKWKI 483
           A SDD++LVFVVGAM+HGKI+NDYTDDFI++SGYPLSA+ C   IC AL  KW I
Sbjct: 216 AVSDDVDLVFVVGAMAHGKISNDYTDDFIAISGYPLSASWCTYLICGALMQKWNI 270


>ref|XP_002275293.1| PREDICTED: ribosomal RNA small subunit methyltransferase nep-1
           [Vitis vinifera] gi|296085405|emb|CBI29137.3| unnamed
           protein product [Vitis vinifera]
          Length = 271

 Score =  109 bits (273), Expect = 2e-22
 Identities = 53/63 (84%), Positives = 59/63 (93%)
 Frame = +3

Query: 3   YVKTEKGVLFEVKPHCRMPRTFKRFCGIMLQLLQKLSITATGKREKLLRVIANPVTRHLP 182
           YV+TEKGVLFEVKPH R+PRT+KRF GIMLQLLQKLSITA GKREKLLRVI NPVT++LP
Sbjct: 133 YVRTEKGVLFEVKPHVRIPRTYKRFSGIMLQLLQKLSITAVGKREKLLRVIKNPVTQYLP 192

Query: 183 LNS 191
           +NS
Sbjct: 193 VNS 195



 Score = 86.3 bits (212), Expect = 2e-15
 Identities = 40/55 (72%), Positives = 46/55 (83%)
 Frame = +1

Query: 319 AASDDMNLVFVVGAMSHGKINNDYTDDFISVSGYPLSAACCIGRICNALELKWKI 483
           A SDD++LVFVVGAM+HGKI+NDYTDDFI++SGYPLSAA C   IC AL  KW I
Sbjct: 216 AVSDDVDLVFVVGAMAHGKISNDYTDDFIAISGYPLSAAWCTYLICGALMQKWNI 270


>ref|XP_002322624.1| predicted protein [Populus trichocarpa] gi|222867254|gb|EEF04385.1|
           predicted protein [Populus trichocarpa]
          Length = 229

 Score =  109 bits (272), Expect = 3e-22
 Identities = 53/63 (84%), Positives = 58/63 (92%)
 Frame = +3

Query: 3   YVKTEKGVLFEVKPHCRMPRTFKRFCGIMLQLLQKLSITATGKREKLLRVIANPVTRHLP 182
           YVKT+KGVLFEVKP+ R+PRT+KRF GIMLQLLQKLSI A GKREKLLRVI NPVT+HLP
Sbjct: 91  YVKTDKGVLFEVKPYVRIPRTYKRFAGIMLQLLQKLSIAAVGKREKLLRVIKNPVTQHLP 150

Query: 183 LNS 191
           LNS
Sbjct: 151 LNS 153



 Score = 80.9 bits (198), Expect = 1e-13
 Identities = 38/52 (73%), Positives = 42/52 (80%)
 Frame = +1

Query: 331 DMNLVFVVGAMSHGKINNDYTDDFISVSGYPLSAACCIGRICNALELKWKIL 486
           D +LVFVVGAMSHGKI  DY DDFISVS YPLSAA CI RIC A+  KW++L
Sbjct: 178 DTDLVFVVGAMSHGKIECDYIDDFISVSEYPLSAAWCIARICEAVSKKWRVL 229


>ref|XP_002307982.1| predicted protein [Populus trichocarpa] gi|222853958|gb|EEE91505.1|
           predicted protein [Populus trichocarpa]
          Length = 284

 Score =  109 bits (272), Expect = 3e-22
 Identities = 53/63 (84%), Positives = 58/63 (92%)
 Frame = +3

Query: 3   YVKTEKGVLFEVKPHCRMPRTFKRFCGIMLQLLQKLSITATGKREKLLRVIANPVTRHLP 182
           YVKT+KGVLFEVKPH R+PRT+KRF GIMLQLLQKLSITA G REKLLRVI NPVT++LP
Sbjct: 146 YVKTDKGVLFEVKPHVRIPRTYKRFAGIMLQLLQKLSITAVGNREKLLRVIKNPVTQYLP 205

Query: 183 LNS 191
           LNS
Sbjct: 206 LNS 208



 Score = 83.2 bits (204), Expect = 2e-14
 Identities = 38/53 (71%), Positives = 43/53 (81%)
 Frame = +1

Query: 328 DDMNLVFVVGAMSHGKINNDYTDDFISVSGYPLSAACCIGRICNALELKWKIL 486
           DD +LVFVVGAMSHGKI  DY DDFISVS YPLSAA CI R+C A+  KW++L
Sbjct: 232 DDTDLVFVVGAMSHGKIECDYVDDFISVSEYPLSAAWCIARVCEAVSKKWRVL 284


Top