BLASTX nr result

ID: Papaver22_contig00024346 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Papaver22_contig00024346
         (596 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003529663.1| PREDICTED: F-box protein CPR30-like [Glycine...    60   4e-07
ref|XP_003549554.1| PREDICTED: F-box protein CPR30-like [Glycine...    59   6e-07
ref|XP_002330354.1| predicted protein [Populus trichocarpa] gi|2...    56   5e-06

>ref|XP_003529663.1| PREDICTED: F-box protein CPR30-like [Glycine max]
          Length = 385

 Score = 59.7 bits (143), Expect = 4e-07
 Identities = 48/149 (32%), Positives = 71/149 (47%), Gaps = 12/149 (8%)
 Frame = -1

Query: 596 TNEYKVVRMYM---LQGEANFIEVEVYTLGSGSGWRNLGKFDYGLNILHSVHGAFADGAL 426
           +N+YK++ +     LQ      +V++YTL S S W+NL    Y L    ++ G F  G+L
Sbjct: 145 SNDYKLLSITYFVDLQKRTFDSQVQLYTLKSDS-WKNLPSMPYALCCARTM-GVFVSGSL 202

Query: 425 HWVDMEK-------RIVAFDLTEKKFCGHLLPPVNSGLFRLKV--WDGLLLYVEGVSSQF 273
           HW+   K        IV+FDLT + F    LP   +G F ++V    G L  VE   + F
Sbjct: 203 HWLVTRKLQPHEPDLIVSFDLTRETFHEVPLPVTVNGDFDMQVALLGGCLCVVEHRGTGF 262

Query: 272 DIWILKTXXXXXXXXXHQSLGWSKEFTLL 186
           D+W+++               W K FTLL
Sbjct: 263 DVWVMRVYGSRN--------SWEKLFTLL 283


>ref|XP_003549554.1| PREDICTED: F-box protein CPR30-like [Glycine max]
          Length = 382

 Score = 58.9 bits (141), Expect = 6e-07
 Identities = 38/104 (36%), Positives = 55/104 (52%), Gaps = 9/104 (8%)
 Frame = -1

Query: 539 EVEVYTLGSGSGWRNLGKFDYGLNILHSVHGAFADGALHWV-------DMEKRIVAFDLT 381
           +V++YTL S S W+NL    Y L    ++ G F  G+LHW+       D    IVAFDLT
Sbjct: 167 QVQLYTLKSDS-WKNLPSMPYALCCARTM-GVFVSGSLHWLVTRKLQPDEPDLIVAFDLT 224

Query: 380 EKKFCGHLLPPVNSGLFRLKV--WDGLLLYVEGVSSQFDIWILK 255
            + FC   LP   +G F ++V    G L  VE   + F +W+++
Sbjct: 225 SETFCEVPLPATVNGNFDMQVALLGGCLCVVEHRGTGFHVWVMR 268


>ref|XP_002330354.1| predicted protein [Populus trichocarpa] gi|222871558|gb|EEF08689.1|
           predicted protein [Populus trichocarpa]
          Length = 452

 Score = 55.8 bits (133), Expect = 5e-06
 Identities = 52/181 (28%), Positives = 87/181 (48%), Gaps = 17/181 (9%)
 Frame = -1

Query: 596 TNEYKVVR-MYMLQGEANFIEVEVYTLGSGSGWRNLGKFDYGLNILHSVHGAFADGALHW 420
           T EYKV+   Y  +G  +  E E+YT+G+G  WR++ K  + L+I   +  +F  G++HW
Sbjct: 183 TKEYKVLHTFYSKKGPDSQPEAEIYTIGTGK-WRSIHKALHILDIF--MFDSFVCGSIHW 239

Query: 419 V-----DMEKRIVAFDLTEKKFCGHLLPP-VNSGLFRLKVWDGLL---LYVEGVSSQFDI 267
                 +    I +F+   ++F    LPP  + G   L V++G L    +     +QF+I
Sbjct: 240 ELRGEDNCVNSIGSFNFENEQFSQLSLPPRYDEGGVTLTVFEGCLGVSFFNTCCETQFEI 299

Query: 266 WILKTXXXXXXXXXHQSLGWSKEFTL--LG----GKPVAFTKSGCALCCSD-GYFCIYDP 108
           W++K               W+K+FT+  LG     +P+ F  +G  L   +   F IYD 
Sbjct: 300 WVMK--------EYGNKQSWTKQFTVKNLGFENHYQPLIFLNNGLILMMDNHERFVIYDT 351

Query: 107 K 105
           +
Sbjct: 352 R 352


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