BLASTX nr result

ID: Papaver22_contig00024294 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Papaver22_contig00024294
         (488 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|ABG37658.1| integrase [Populus trichocarpa]                        242   2e-62
gb|ABG37668.1| gag protein [Populus trichocarpa]                      239   1e-61
gb|ABG37657.1| integrase [Populus trichocarpa]                        239   1e-61
gb|AAD15534.1| putative retroelement pol polyprotein [Arabidopsi...   231   5e-59
gb|ABD63142.1| Retrotransposon gag protein [Asparagus officinalis]    231   6e-59

>gb|ABG37658.1| integrase [Populus trichocarpa]
          Length = 1139

 Score =  242 bits (618), Expect = 2e-62
 Identities = 115/162 (70%), Positives = 133/162 (82%)
 Frame = -3

Query: 486 FGDSFDLCLNNLSLILERCVETNLVLNWEKCHFMVTHGIVLGHIISSKGLEVDKSKIDLI 307
           FGDSFD CL NL  +L RC E NLVLNWEKCHFMVT+GIVLGHI+SSKG+EVDKSKI+LI
Sbjct: 504 FGDSFDDCLTNLEKVLSRCEEKNLVLNWEKCHFMVTNGIVLGHIVSSKGIEVDKSKIELI 563

Query: 306 RALTPPTTVREIRSFLGHAGFYRRFIKDFSKIASPLCNLLQKDVVFNFDEKCMAAFNRLK 127
             L  P +V+++RSFLGHAGFYRRFIKDFS I+ PL NLL KD +F + E C  AF +LK
Sbjct: 564 ANLPTPKSVKDVRSFLGHAGFYRRFIKDFSVISKPLSNLLTKDNIFEWTEHCEEAFVKLK 623

Query: 126 ELLISAPIIKPPDWSKPFELMCDASDYAVGAVLGQRVGKIPH 1
            LL SAP+++PPDWS PFE+MCDASDYAVGAVLGQR  K P+
Sbjct: 624 NLLTSAPVVQPPDWSLPFEIMCDASDYAVGAVLGQRKDKKPY 665


>gb|ABG37668.1| gag protein [Populus trichocarpa]
          Length = 1886

 Score =  239 bits (611), Expect = 1e-61
 Identities = 113/162 (69%), Positives = 133/162 (82%)
 Frame = -3

Query: 486  FGDSFDLCLNNLSLILERCVETNLVLNWEKCHFMVTHGIVLGHIISSKGLEVDKSKIDLI 307
            FGDSFD CL NL  +L RC E NL+LNW+KCHFMVT+GIVLGHI+SSK +EVDKSKI+LI
Sbjct: 1249 FGDSFDDCLTNLEKVLNRCEEKNLILNWKKCHFMVTNGIVLGHIVSSKRIEVDKSKIELI 1308

Query: 306  RALTPPTTVREIRSFLGHAGFYRRFIKDFSKIASPLCNLLQKDVVFNFDEKCMAAFNRLK 127
              L  P +V+++RSFLGHAGFYRRFIKDFS I+ PLCNLL K+ VF + E+C  AF +LK
Sbjct: 1309 ANLPTPKSVKDVRSFLGHAGFYRRFIKDFSVISKPLCNLLTKENVFEWTEQCEKAFVKLK 1368

Query: 126  ELLISAPIIKPPDWSKPFELMCDASDYAVGAVLGQRVGKIPH 1
             LL SAP+I+PPDWS PFE+MCDASDY VGAVLGQR  K P+
Sbjct: 1369 SLLTSAPVIQPPDWSLPFEIMCDASDYVVGAVLGQRKDKKPY 1410



 Score =  239 bits (611), Expect = 1e-61
 Identities = 113/162 (69%), Positives = 133/162 (82%)
 Frame = -3

Query: 486  FGDSFDLCLNNLSLILERCVETNLVLNWEKCHFMVTHGIVLGHIISSKGLEVDKSKIDLI 307
            FGDSFD CL NL  +L RC E NL+LNW+KCHFMVT+GIVLGHI+SSK +EVDKSKI+LI
Sbjct: 1485 FGDSFDDCLTNLEKVLNRCEEKNLILNWKKCHFMVTNGIVLGHIVSSKRIEVDKSKIELI 1544

Query: 306  RALTPPTTVREIRSFLGHAGFYRRFIKDFSKIASPLCNLLQKDVVFNFDEKCMAAFNRLK 127
              L  P +V+++RSFLGHAGFYRRFIKDFS I+ PLCNLL K+ VF + E+C  AF +LK
Sbjct: 1545 ANLPTPKSVKDVRSFLGHAGFYRRFIKDFSVISKPLCNLLTKENVFEWTEQCEKAFVKLK 1604

Query: 126  ELLISAPIIKPPDWSKPFELMCDASDYAVGAVLGQRVGKIPH 1
             LL SAP+I+PPDWS PFE+MCDASDY VGAVLGQR  K P+
Sbjct: 1605 SLLTSAPVIQPPDWSLPFEIMCDASDYVVGAVLGQRKDKKPY 1646


>gb|ABG37657.1| integrase [Populus trichocarpa]
          Length = 1738

 Score =  239 bits (611), Expect = 1e-61
 Identities = 113/162 (69%), Positives = 133/162 (82%)
 Frame = -3

Query: 486  FGDSFDLCLNNLSLILERCVETNLVLNWEKCHFMVTHGIVLGHIISSKGLEVDKSKIDLI 307
            FGDSFD CL NL  +L RC E NL+LNW+KCHFMVT+GIVLGHI+SSK +EVDKSKI+LI
Sbjct: 1101 FGDSFDDCLTNLEKVLNRCEEKNLILNWKKCHFMVTNGIVLGHIVSSKRIEVDKSKIELI 1160

Query: 306  RALTPPTTVREIRSFLGHAGFYRRFIKDFSKIASPLCNLLQKDVVFNFDEKCMAAFNRLK 127
              L  P +V+++RSFLGHAGFYRRFIKDFS I+ PLCNLL K+ VF + E+C  AF +LK
Sbjct: 1161 ANLPTPKSVKDVRSFLGHAGFYRRFIKDFSVISKPLCNLLTKENVFEWTEQCEKAFVKLK 1220

Query: 126  ELLISAPIIKPPDWSKPFELMCDASDYAVGAVLGQRVGKIPH 1
             LL SAP+I+PPDWS PFE+MCDASDY VGAVLGQR  K P+
Sbjct: 1221 SLLTSAPVIQPPDWSLPFEIMCDASDYVVGAVLGQRKDKKPY 1262



 Score =  239 bits (611), Expect = 1e-61
 Identities = 113/162 (69%), Positives = 133/162 (82%)
 Frame = -3

Query: 486  FGDSFDLCLNNLSLILERCVETNLVLNWEKCHFMVTHGIVLGHIISSKGLEVDKSKIDLI 307
            FGDSFD CL NL  +L RC E NL+LNW+KCHFMVT+GIVLGHI+SSK +EVDKSKI+LI
Sbjct: 1337 FGDSFDDCLTNLEKVLNRCEEKNLILNWKKCHFMVTNGIVLGHIVSSKRIEVDKSKIELI 1396

Query: 306  RALTPPTTVREIRSFLGHAGFYRRFIKDFSKIASPLCNLLQKDVVFNFDEKCMAAFNRLK 127
              L  P +V+++RSFLGHAGFYRRFIKDFS I+ PLCNLL K+ VF + E+C  AF +LK
Sbjct: 1397 ANLPTPKSVKDVRSFLGHAGFYRRFIKDFSVISKPLCNLLTKENVFEWTEQCEKAFVKLK 1456

Query: 126  ELLISAPIIKPPDWSKPFELMCDASDYAVGAVLGQRVGKIPH 1
             LL SAP+I+PPDWS PFE+MCDASDY VGAVLGQR  K P+
Sbjct: 1457 SLLTSAPVIQPPDWSLPFEIMCDASDYVVGAVLGQRKDKKPY 1498


>gb|AAD15534.1| putative retroelement pol polyprotein [Arabidopsis thaliana]
          Length = 1664

 Score =  231 bits (589), Expect = 5e-59
 Identities = 108/162 (66%), Positives = 127/162 (78%)
 Frame = -3

Query: 486  FGDSFDLCLNNLSLILERCVETNLVLNWEKCHFMVTHGIVLGHIISSKGLEVDKSKIDLI 307
            +  SF  CL NL  +L RC ETNLVLNWEKCHFMV  GIVLGH IS KG+EVDK KI +I
Sbjct: 1486 YSPSFSSCLLNLGRVLTRCKETNLVLNWEKCHFMVKEGIVLGHKISKKGIEVDKGKIKVI 1545

Query: 306  RALTPPTTVREIRSFLGHAGFYRRFIKDFSKIASPLCNLLQKDVVFNFDEKCMAAFNRLK 127
              L PP TV++IRSFLGHAGFYRRFIKDFSKIA PL  LL K+  F FDE C+ +F+ +K
Sbjct: 1546 MQLQPPKTVKDIRSFLGHAGFYRRFIKDFSKIARPLTRLLCKETEFEFDEDCLKSFHTIK 1605

Query: 126  ELLISAPIIKPPDWSKPFELMCDASDYAVGAVLGQRVGKIPH 1
            E L+SAP+++ P+W  PFE+MCDASDYAVGA+LGQR+GK  H
Sbjct: 1606 EALVSAPVVRAPNWDYPFEIMCDASDYAVGAILGQRIGKKLH 1647


>gb|ABD63142.1| Retrotransposon gag protein [Asparagus officinalis]
          Length = 1788

 Score =  231 bits (588), Expect = 6e-59
 Identities = 108/162 (66%), Positives = 128/162 (79%)
 Frame = -3

Query: 486  FGDSFDLCLNNLSLILERCVETNLVLNWEKCHFMVTHGIVLGHIISSKGLEVDKSKIDLI 307
            FGD+F  CL++L L+LERC E NL LNWEKCHFMV  GIVLGH++S++G+EVDK+K+D+I
Sbjct: 1011 FGDTFSQCLHHLKLVLERCREKNLTLNWEKCHFMVKQGIVLGHVVSNRGIEVDKAKVDII 1070

Query: 306  RALTPPTTVREIRSFLGHAGFYRRFIKDFSKIASPLCNLLQKDVVFNFDEKCMAAFNRLK 127
              L PP TV+++RSFLGHAGFYRRFIKDFSKIA PL NLL KD  F F   C+ AF  LK
Sbjct: 1071 SNLPPPKTVKDVRSFLGHAGFYRRFIKDFSKIARPLTNLLAKDTSFVFSPDCLKAFEYLK 1130

Query: 126  ELLISAPIIKPPDWSKPFELMCDASDYAVGAVLGQRVGKIPH 1
            + L +APII  PDW+ PFELMCDASD A+GAVLGQR    PH
Sbjct: 1131 KELTTAPIIHAPDWTLPFELMCDASDSAIGAVLGQRFDGKPH 1172


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