BLASTX nr result

ID: Papaver22_contig00024254 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Papaver22_contig00024254
         (569 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002305655.1| f-box family protein [Populus trichocarpa] g...    73   3e-11
ref|XP_002316660.1| predicted protein [Populus trichocarpa] gi|2...    73   4e-11
ref|XP_003634996.1| PREDICTED: F-box protein SKIP27-like [Vitis ...    71   1e-10
emb|CBI23311.3| unnamed protein product [Vitis vinifera]               71   1e-10
emb|CBI23307.3| unnamed protein product [Vitis vinifera]               70   3e-10

>ref|XP_002305655.1| f-box family protein [Populus trichocarpa]
           gi|222848619|gb|EEE86166.1| f-box family protein
           [Populus trichocarpa]
          Length = 189

 Score = 73.2 bits (178), Expect = 3e-11
 Identities = 39/89 (43%), Positives = 56/89 (62%)
 Frame = +3

Query: 3   DHADLEHLYHVSNKIRDASLIAKQWYFAXXXXXXXXXXXXXXXXXXEEPNKLESIDAPNA 182
           DH DL+ L+HVS  IR+A+LIAK+ +FA                  E P +L+ I+APNA
Sbjct: 95  DHDDLKQLFHVSKVIREATLIAKESHFAYSTPRKSQGFRSPFDL--ENPGELDEIEAPNA 152

Query: 183 PRQERISKSRISAKKLAGLAVALFRSPEE 269
           P+Q R  KSR++ K +A ++VALF SP++
Sbjct: 153 PKQRRSYKSRLNRKSIADVSVALFASPKK 181


>ref|XP_002316660.1| predicted protein [Populus trichocarpa] gi|222859725|gb|EEE97272.1|
           predicted protein [Populus trichocarpa]
          Length = 189

 Score = 72.8 bits (177), Expect = 4e-11
 Identities = 38/89 (42%), Positives = 55/89 (61%)
 Frame = +3

Query: 3   DHADLEHLYHVSNKIRDASLIAKQWYFAXXXXXXXXXXXXXXXXXXEEPNKLESIDAPNA 182
           DH DL+ L+HVS  IR+A+LIAK+W+FA                    P+ L+ I+APNA
Sbjct: 95  DHDDLKQLFHVSKVIREATLIAKEWHFAYSTPRKTQAFRTRIDFG--NPSGLDEIEAPNA 152

Query: 183 PRQERISKSRISAKKLAGLAVALFRSPEE 269
           P+Q R  KS ++ K +A ++VALF SP++
Sbjct: 153 PKQRRSYKSLLNRKSIADVSVALFASPKK 181


>ref|XP_003634996.1| PREDICTED: F-box protein SKIP27-like [Vitis vinifera]
          Length = 172

 Score = 70.9 bits (172), Expect = 1e-10
 Identities = 38/89 (42%), Positives = 54/89 (60%)
 Frame = +3

Query: 3   DHADLEHLYHVSNKIRDASLIAKQWYFAXXXXXXXXXXXXXXXXXXEEPNKLESIDAPNA 182
           DH DL+ L+HVSN IRDA+LIAK+ +FA                  EE +  + +  P+A
Sbjct: 86  DHDDLKQLFHVSNTIRDATLIAKKSHFAYSTPSKVQTFRSPLDP--EESSGFDDLQTPDA 143

Query: 183 PRQERISKSRISAKKLAGLAVALFRSPEE 269
           P+Q R  +SR+  +KL+G+A+ALF S EE
Sbjct: 144 PKQSRHFRSRLRGRKLSGIAIALFSSDEE 172


>emb|CBI23311.3| unnamed protein product [Vitis vinifera]
          Length = 430

 Score = 70.9 bits (172), Expect = 1e-10
 Identities = 38/89 (42%), Positives = 54/89 (60%)
 Frame = +3

Query: 3   DHADLEHLYHVSNKIRDASLIAKQWYFAXXXXXXXXXXXXXXXXXXEEPNKLESIDAPNA 182
           DH DL+ L+HVSN IRDA+LIAK+ +FA                  EE +  + +  P+A
Sbjct: 344 DHDDLKQLFHVSNTIRDATLIAKKSHFAYSTPSKVQTFRSPLDP--EESSGFDDLQTPDA 401

Query: 183 PRQERISKSRISAKKLAGLAVALFRSPEE 269
           P+Q R  +SR+  +KL+G+A+ALF S EE
Sbjct: 402 PKQSRHFRSRLRGRKLSGIAIALFSSDEE 430


>emb|CBI23307.3| unnamed protein product [Vitis vinifera]
          Length = 113

 Score = 69.7 bits (169), Expect = 3e-10
 Identities = 37/89 (41%), Positives = 54/89 (60%)
 Frame = +3

Query: 3   DHADLEHLYHVSNKIRDASLIAKQWYFAXXXXXXXXXXXXXXXXXXEEPNKLESIDAPNA 182
           DH DL+ L+HVSN IRDA+LIAK+ +FA                  EE +  + +  P+A
Sbjct: 27  DHDDLKQLFHVSNTIRDATLIAKKSHFAFSTPSKVQTFRSPLDP--EESSGFDDLQTPDA 84

Query: 183 PRQERISKSRISAKKLAGLAVALFRSPEE 269
           P+Q R  +SR+  ++L+G+A+ALF S EE
Sbjct: 85  PKQSRHFRSRLRGRRLSGIAIALFSSDEE 113


Top