BLASTX nr result

ID: Papaver22_contig00024081 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Papaver22_contig00024081
         (738 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

dbj|BAB09815.1| non-LTR retroelement reverse transcriptase-like ...    43   6e-08
gb|AAD22368.1| putative non-LTR retroelement reverse transcripta...    43   1e-06
gb|AAF97302.1|AC007843_5 Hypothetical protein [Arabidopsis thali...    45   2e-06
gb|AAF79490.1|AC022492_34 F1L3.4 [Arabidopsis thaliana]                45   2e-06
gb|AAC26674.1| putative non-LTR retroelement reverse transcripta...    40   7e-06

>dbj|BAB09815.1| non-LTR retroelement reverse transcriptase-like [Arabidopsis
           thaliana]
          Length = 676

 Score = 42.7 bits (99), Expect(2) = 6e-08
 Identities = 26/85 (30%), Positives = 37/85 (43%)
 Frame = +2

Query: 134 IKWNPPPTDWMKINTDGASRNDVRGVPEDAGARWICIDSQGSTIMAMAAPNGKTTALVAE 313
           I W  P   W+ +NTDGAS     G P  A A  +  D  GS ++  A   G  +A +AE
Sbjct: 506 IAWRKPAEGWVTMNTDGAS----HGNPGQATAGGVIRDEHGSWLVGFALNIGVCSAPLAE 561

Query: 314 TWAFLLATRMAVSKE*NNINFKTDS 388
            W       +A  +    +  + DS
Sbjct: 562 LWGVYYGLVVAWERGWRRVRLEVDS 586



 Score = 40.0 bits (92), Expect(2) = 6e-08
 Identities = 22/62 (35%), Positives = 33/62 (53%)
 Frame = +3

Query: 501 HTYMEGNQAADGLADFATKKILQNINGDTGGTSTTIWEHTCPEFINLIVMNDSIGTSYPR 680
           H Y E N+ ADGLA++A       +  D+           CPE ++ I++ D +GTS+PR
Sbjct: 624 HVYREANRLADGLANYAFTLPFGFLLLDS-----------CPEHVSSILLEDVMGTSFPR 672

Query: 681 EV 686
            V
Sbjct: 673 HV 674


>gb|AAD22368.1| putative non-LTR retroelement reverse transcriptase [Arabidopsis
           thaliana]
          Length = 321

 Score = 43.1 bits (100), Expect(2) = 1e-06
 Identities = 27/85 (31%), Positives = 38/85 (44%)
 Frame = +2

Query: 134 IKWNPPPTDWMKINTDGASRNDVRGVPEDAGARWICIDSQGSTIMAMAAPNGKTTALVAE 313
           + W  P   W+K+NTDGAS    RG P  A A  +  D  G+ I   A   G  +A +AE
Sbjct: 151 VSWVSPEDGWVKLNTDGAS----RGNPGFATAGGVLRDHNGAWIGGFAVNIGVCSAPLAE 206

Query: 314 TWAFLLATRMAVSKE*NNINFKTDS 388
            W       +A  +    +  + DS
Sbjct: 207 LWGVYYGLFIAWGRGARRVELEVDS 231



 Score = 35.4 bits (80), Expect(2) = 1e-06
 Identities = 22/67 (32%), Positives = 34/67 (50%), Gaps = 3/67 (4%)
 Frame = +3

Query: 501 HTYMEGNQAADGLADFATKKILQNINGDTGGTSTTIWEH---TCPEFINLIVMNDSIGTS 671
           H Y E N+ ADGLA++A               S ++  H   + P+ ++ I+++D  G S
Sbjct: 269 HVYREANRLADGLANYA--------------FSLSLGLHLLESRPDVVSSILLDDVAGVS 314

Query: 672 YPREVPV 692
           YPR V V
Sbjct: 315 YPRHVQV 321


>gb|AAF97302.1|AC007843_5 Hypothetical protein [Arabidopsis thaliana]
           gi|55978717|gb|AAV68820.1| hypothetical protein
           AT1G17390 [Arabidopsis thaliana]
          Length = 272

 Score = 45.1 bits (105), Expect(2) = 2e-06
 Identities = 27/85 (31%), Positives = 38/85 (44%)
 Frame = +2

Query: 134 IKWNPPPTDWMKINTDGASRNDVRGVPEDAGARWICIDSQGSTIMAMAAPNGKTTALVAE 313
           I W+PP   W K+NTDGAS    RG P  A A  +  D  G+     +   G  +A +AE
Sbjct: 102 IAWSPPRVGWFKLNTDGAS----RGNPRLATAGGVVRDGDGNWCYGFSLNIGICSAPLAE 157

Query: 314 TWAFLLATRMAVSKE*NNINFKTDS 388
            W       +A  +    +  + DS
Sbjct: 158 LWGAYYGLNIAWERGVTQLEMEIDS 182



 Score = 32.7 bits (73), Expect(2) = 2e-06
 Identities = 24/64 (37%), Positives = 32/64 (50%)
 Frame = +3

Query: 501 HTYMEGNQAADGLADFATKKILQNINGDTGGTSTTIWEHTCPEFINLIVMNDSIGTSYPR 680
           H Y E N+ ADGLA++A    L    G     ST       P+ +  IV +D  G++YPR
Sbjct: 220 HVYREANRLADGLANYAFFLPL----GFHLFNST-------PDIVMSIVHDDVAGSAYPR 268

Query: 681 EVPV 692
            V V
Sbjct: 269 NVQV 272


>gb|AAF79490.1|AC022492_34 F1L3.4 [Arabidopsis thaliana]
          Length = 253

 Score = 45.1 bits (105), Expect(2) = 2e-06
 Identities = 27/85 (31%), Positives = 38/85 (44%)
 Frame = +2

Query: 134 IKWNPPPTDWMKINTDGASRNDVRGVPEDAGARWICIDSQGSTIMAMAAPNGKTTALVAE 313
           I W+PP   W K+NTDGAS    RG P  A A  +  D  G+     +   G  +A +AE
Sbjct: 83  IAWSPPRVGWFKLNTDGAS----RGNPRLATAGGVVRDGDGNWCYGFSLNIGICSAPLAE 138

Query: 314 TWAFLLATRMAVSKE*NNINFKTDS 388
            W       +A  +    +  + DS
Sbjct: 139 LWGAYYGLNIAWERGVTQLEMEIDS 163



 Score = 32.7 bits (73), Expect(2) = 2e-06
 Identities = 24/64 (37%), Positives = 32/64 (50%)
 Frame = +3

Query: 501 HTYMEGNQAADGLADFATKKILQNINGDTGGTSTTIWEHTCPEFINLIVMNDSIGTSYPR 680
           H Y E N+ ADGLA++A    L    G     ST       P+ +  IV +D  G++YPR
Sbjct: 201 HVYREANRLADGLANYAFFLPL----GFHLFNST-------PDIVMSIVHDDVAGSAYPR 249

Query: 681 EVPV 692
            V V
Sbjct: 250 NVQV 253


>gb|AAC26674.1| putative non-LTR retroelement reverse transcriptase [Arabidopsis
            thaliana]
          Length = 970

 Score = 40.4 bits (93), Expect(2) = 7e-06
 Identities = 26/85 (30%), Positives = 38/85 (44%)
 Frame = +2

Query: 134  IKWNPPPTDWMKINTDGASRNDVRGVPEDAGARWICIDSQGSTIMAMAAPNGKTTALVAE 313
            I+W  P   W+K+ TDGASR   +G+   +GA    ++ QG  +   A   G   A +AE
Sbjct: 800  IRWKAPSDRWVKLTTDGASRGH-QGLAAASGA---ILNLQGEWLGGFALNIGSCDAPLAE 855

Query: 314  TWAFLLATRMAVSKE*NNINFKTDS 388
             W       +A  K    +    DS
Sbjct: 856  LWGAYYGLLIAWDKGFRRVELNLDS 880



 Score = 35.4 bits (80), Expect(2) = 7e-06
 Identities = 24/62 (38%), Positives = 32/62 (51%)
 Frame = +3

Query: 501  HTYMEGNQAADGLADFATKKILQNINGDTGGTSTTIWEHTCPEFINLIVMNDSIGTSYPR 680
            H Y E N+ ADGLA++A    L       G     I    CPE + L ++ D+ GTS+PR
Sbjct: 918  HVYREANRLADGLANYAFFLPL-------GFHCFEI----CPEDVLLFLVEDANGTSFPR 966

Query: 681  EV 686
             V
Sbjct: 967  AV 968


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