BLASTX nr result

ID: Papaver22_contig00024018 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Papaver22_contig00024018
         (644 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003588355.1| Mitochondrial protein, putative [Medicago tr...   141   2e-34
ref|YP_173374.1| hypothetical protein NitaMp027 [Nicotiana tabac...    91   9e-26
ref|NP_085475.1| hypothetical protein ArthMp003 [Arabidopsis tha...    91   1e-16
emb|CBI20529.3| unnamed protein product [Vitis vinifera]               86   1e-15
emb|CBA31926.1| hypothetical protein Csp_D29560 [Curvibacter put...    80   3e-13

>ref|XP_003588355.1| Mitochondrial protein, putative [Medicago truncatula]
            gi|355477403|gb|AES58606.1| Mitochondrial protein,
            putative [Medicago truncatula]
          Length = 1106

 Score =  141 bits (355), Expect(2) = 2e-34
 Identities = 81/151 (53%), Positives = 88/151 (58%), Gaps = 22/151 (14%)
 Frame = -3

Query: 504  FFSPFPHGTCTLSVIEEYLGLEGGPPFSRKSDHHSNTPRFTGKDRTLERIYRAITFFGQI 325
            FFSPFPHGTCTLSVIEEYLGLEGGPPFSRKSD +SNTPRFTGKDRT+    +        
Sbjct: 886  FFSPFPHGTCTLSVIEEYLGLEGGPPFSRKSDQNSNTPRFTGKDRTMGTNLQGSHLLWPD 945

Query: 324  FQPFHNTVPCTRRTLVIAC*FFHHPILNES*HSF----------------------QALT 211
               F             AC FFHHPI N+S  ++                      Q   
Sbjct: 946  LPTFSQLQFTAPFKCAGACWFFHHPIHNKSNETWRKRSEHFAAEEFIILERVFVFLQTPI 1005

Query: 210  RFRSPRLTGSRLISFPLATQMFQFAKFESPK 118
            R RSP LTGSRLIS PLAT+MFQFAKFE  K
Sbjct: 1006 RSRSPLLTGSRLISLPLATKMFQFAKFEKSK 1036



 Score = 30.4 bits (67), Expect(2) = 2e-34
 Identities = 13/17 (76%), Positives = 13/17 (76%)
 Frame = -1

Query: 644 PTPNSLSCSPHFLADPS 594
           PTPN LS   HFLADPS
Sbjct: 868 PTPNGLSRCSHFLADPS 884



 Score =  108 bits (269), Expect = 1e-21
 Identities = 72/172 (41%), Positives = 77/172 (44%), Gaps = 22/172 (12%)
 Frame = -2

Query: 451  LRLRGWSPFLA*KRSSFEHAAFYWEGSNLGTNLQGYHLLWPDLPTFSQYSSLHA*NLGHR 272
            L L G  PF      +     F  +   +GTNLQG HLLWPDLPTFSQ            
Sbjct: 904  LGLEGGPPFSRKSDQNSNTPRFTGKDRTMGTNLQGSHLLWPDLPTFSQLQFTAPFKCAGA 963

Query: 271  LLVF--PSSN--------------------LE*KLAFFSSSNPLSLAATNGVSVDFLXXX 158
               F  P  N                    LE    F  +          G  +  L   
Sbjct: 964  CWFFHHPIHNKSNETWRKRSEHFAAEEFIILERVFVFLQTPIRSRSPLLTGSRLISLPLA 1023

Query: 157  XXXXXXXXXXXSKERRLATELGYGFPIGDPWITDGISPWPFASESVLPSQCP 2
                       SKERRLA ELGYGFPIGDPWITDGISPWPFASESVLPSQCP
Sbjct: 1024 TKMFQFAKFEKSKERRLAAELGYGFPIGDPWITDGISPWPFASESVLPSQCP 1075


>ref|YP_173374.1| hypothetical protein NitaMp027 [Nicotiana tabacum]
           gi|57014030|ref|YP_173501.1| hypothetical protein
           NitaMp164 [Nicotiana tabacum]
           gi|56806536|dbj|BAD83437.1| hypothetical protein
           (mitochondrion) [Nicotiana tabacum]
           gi|56806666|dbj|BAD83567.1| hypothetical protein
           (mitochondrion) [Nicotiana tabacum]
          Length = 138

 Score = 91.3 bits (225), Expect(2) = 9e-26
 Identities = 40/40 (100%), Positives = 40/40 (100%)
 Frame = -2

Query: 121 KERRLATELGYGFPIGDPWITDGISPWPFASESVLPSQCP 2
           KERRLATELGYGFPIGDPWITDGISPWPFASESVLPSQCP
Sbjct: 57  KERRLATELGYGFPIGDPWITDGISPWPFASESVLPSQCP 96



 Score = 51.6 bits (122), Expect(2) = 9e-26
 Identities = 26/36 (72%), Positives = 28/36 (77%)
 Frame = -3

Query: 225 FQALTRFRSPRLTGSRLISFPLATQMFQFAKFESPK 118
           F+   R RSP LTGSRLIS PLAT+MFQFAKFE  K
Sbjct: 22  FKPPIRSRSPLLTGSRLISLPLATKMFQFAKFEKSK 57


>ref|NP_085475.1| hypothetical protein ArthMp003 [Arabidopsis thaliana]
           gi|41017293|sp|P93276.1|M030_ARATH RecName:
           Full=Uncharacterized mitochondrial protein AtMg00030;
           AltName: Full=ORF107a gi|1785675|emb|CAA69780.1| unnamed
           protein product [Arabidopsis thaliana]
          Length = 107

 Score = 91.3 bits (225), Expect = 1e-16
 Identities = 40/40 (100%), Positives = 40/40 (100%)
 Frame = -2

Query: 121 KERRLATELGYGFPIGDPWITDGISPWPFASESVLPSQCP 2
           KERRLATELGYGFPIGDPWITDGISPWPFASESVLPSQCP
Sbjct: 11  KERRLATELGYGFPIGDPWITDGISPWPFASESVLPSQCP 50


>emb|CBI20529.3| unnamed protein product [Vitis vinifera]
          Length = 80

 Score = 86.3 bits (212), Expect(2) = 1e-15
 Identities = 38/40 (95%), Positives = 39/40 (97%)
 Frame = -2

Query: 121 KERRLATELGYGFPIGDPWITDGISPWPFASESVLPSQCP 2
           KERRLATELGYGF IGDPWITDGISPWPFAS+SVLPSQCP
Sbjct: 11  KERRLATELGYGFLIGDPWITDGISPWPFASQSVLPSQCP 50



 Score = 22.3 bits (46), Expect(2) = 1e-15
 Identities = 9/11 (81%), Positives = 9/11 (81%)
 Frame = -3

Query: 150 MFQFAKFESPK 118
           MFQFAKFE  K
Sbjct: 1   MFQFAKFEKSK 11


>emb|CBA31926.1| hypothetical protein Csp_D29560 [Curvibacter putative symbiont of
           Hydra magnipapillata]
          Length = 168

 Score = 80.5 bits (197), Expect = 3e-13
 Identities = 54/136 (39%), Positives = 68/136 (50%), Gaps = 1/136 (0%)
 Frame = -3

Query: 528 LYCTP*IGFFSPFPHGTCTLSVIEEYLGLEGGPPFSRKSDHHSNTPRFTGKDRTLERIYR 349
           +Y TP  GFFSPFPHGT +LSV +EYL LE GPP  R+     + P          R   
Sbjct: 1   MYFTPLPGFFSPFPHGTSSLSVNDEYLALEDGPPIFRQD---FSCPALLFASSVPHR--- 54

Query: 348 AITFFGQIFQPFHNTVP-CTRRTLVIAC*FFHHPILNES*HSFQALTRFRSPRLTGSRLI 172
             +F  + + P     P C+  +  I C                 L RFRSP L+ SRL+
Sbjct: 55  --SFHVRGYHPLWPAFPGCSVMSCAITC----------------RLLRFRSPLLSESRLM 96

Query: 171 SFPLATQMFQFAKFES 124
           SFP AT+MFQF +F S
Sbjct: 97  SFPRATEMFQFTRFAS 112


Top